RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 CYP39A1Q9NYL5 469 aa15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 STK24Q9Y6E0 443 aa15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 TM4SF4P48230 202 aa15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 GCLCP48506 637 aaPredicted RBP15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 VEGFBP49765 207 aa15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 CRHR2Q13324 411 aa15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 TKFCQ3LXA3 575 aa15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 SPECC1LQ69YQ0 1117 aa15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 ANKRD35Q8N283 1001 aa15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 CHST13Q8NET6 341 aa15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 RAD54LQ92698 747 aa15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 UIMC1Q96RL1 719 aa15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 LIMA1Q9UHB6 759 aaKnown RBP15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 PSMA7O14818 248 aa15.39■□□□□ 0.05
CSNK1E-201ENST00000359867 ASIC1P78348 528 aa15.39■□□□□ 0.05
CSNK1E-201ENST00000359867 ANKRD20A12PQ8NF67 263 aa15.39■□□□□ 0.05
CSNK1E-201ENST00000359867 ADD3Q9UEY8 706 aaKnown RBP15.39■□□□□ 0.05
CSNK1E-201ENST00000359867 IL31RAQ8NI17 732 aa15.39■□□□□ 0.05
CSNK1E-201ENST00000359867 NOC3LQ8WTT2 800 aaKnown RBP15.39■□□□□ 0.05
CSNK1E-201ENST00000359867 GTF3C2Q8WUA4 911 aaPredicted RBP15.39■□□□□ 0.05
CSNK1E-201ENST00000359867 FAM20AQ96MK3 541 aa15.39■□□□□ 0.05
CSNK1E-201ENST00000359867 ADGRA2Q96PE1 1338 aa15.39■□□□□ 0.05
CSNK1E-201ENST00000359867 LCTP09848 1927 aa15.38■□□□□ 0.05
CSNK1E-201ENST00000359867 KIF2AO00139 706 aaPredicted RBP15.38■□□□□ 0.05
CSNK1E-201ENST00000359867 SLC25A27O95847 323 aa15.38■□□□□ 0.05
CSNK1E-201ENST00000359867 PGK2P07205 417 aa15.38■□□□□ 0.05
CSNK1E-201ENST00000359867 EIF2AK2P19525 551 aaKnown RBP15.38■□□□□ 0.05
CSNK1E-201ENST00000359867 CNTN2Q02246 1040 aa15.38■□□□□ 0.05
CSNK1E-201ENST00000359867 GHRHRQ02643 423 aa15.38■□□□□ 0.05
CSNK1E-201ENST00000359867 PDE4DQ08499 809 aa15.38■□□□□ 0.05
CSNK1E-201ENST00000359867 ARHGAP29Q52LW3 1261 aa15.38■□□□□ 0.05
CSNK1E-201ENST00000359867 UNC13DQ70J99 1090 aa15.38■□□□□ 0.05
CSNK1E-201ENST00000359867 MORF4L1Q9UBU8 362 aa15.38■□□□□ 0.05
CSNK1E-201ENST00000359867 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.38■□□□□ 0.052e-6■■□□□ 11.5
CSNK1E-201ENST00000359867 FANCGO15287 622 aa15.38■□□□□ 0.05
CSNK1E-201ENST00000359867 HNRNPH2P55795 449 aaKnown RBP15.38■□□□□ 0.05
CSNK1E-201ENST00000359867 MCM6Q14566 821 aa15.38■□□□□ 0.05
CSNK1E-201ENST00000359867 FAM110CQ1W6H9 321 aa15.38■□□□□ 0.05
CSNK1E-201ENST00000359867 ETNPPLQ8TBG4 499 aa15.38■□□□□ 0.05
CSNK1E-201ENST00000359867 NUDT12Q9BQG2 462 aa15.38■□□□□ 0.05
CSNK1E-201ENST00000359867 L2HGDHQ9H9P8 463 aa15.38■□□□□ 0.05
CSNK1E-201ENST00000359867 ZCCHC17Q9NP64 241 aaKnown RBP15.38■□□□□ 0.05
CSNK1E-201ENST00000359867 FBXO40Q9UH90 709 aa15.38■□□□□ 0.05
CSNK1E-201ENST00000359867 BICDL2A1A5D9 508 aa15.37■□□□□ 0.05
CSNK1E-201ENST00000359867 TLR2O60603 784 aa15.37■□□□□ 0.05
CSNK1E-201ENST00000359867 CLCN6P51797 869 aa15.37■□□□□ 0.05
CSNK1E-201ENST00000359867 CYP2W1Q8TAV3 490 aa15.37■□□□□ 0.05
CSNK1E-201ENST00000359867 RMDN3Q96TC7 470 aa15.37■□□□□ 0.05
CSNK1E-201ENST00000359867 EPC1Q9H2F5 836 aa15.37■□□□□ 0.05
CSNK1E-201ENST00000359867 THAP9Q9H5L6 903 aa15.37■□□□□ 0.05
CSNK1E-201ENST00000359867 EHMT1Q9H9B1 1298 aa15.37■□□□□ 0.05
CSNK1E-201ENST00000359867 BCRP11274 1271 aa15.37■□□□□ 0.05
CSNK1E-201ENST00000359867 CCT6AP40227 531 aaKnown RBP15.37■□□□□ 0.05
CSNK1E-201ENST00000359867 PSMD2Q13200 908 aa15.37■□□□□ 0.05
CSNK1E-201ENST00000359867 GJA10Q969M2 543 aa15.37■□□□□ 0.05
CSNK1E-201ENST00000359867 ZFYVE28Q9HCC9 887 aa15.37■□□□□ 0.05
CSNK1E-201ENST00000359867 ASTN1O14525 1302 aa15.37■□□□□ 0.05
CSNK1E-201ENST00000359867 MYMKA6NI61 221 aa15.36■□□□□ 0.05
CSNK1E-201ENST00000359867 URI1O94763 535 aaPredicted RBP15.36■□□□□ 0.05
CSNK1E-201ENST00000359867 CCNE1P24864 410 aa15.36■□□□□ 0.05
CSNK1E-201ENST00000359867 PBX1P40424 430 aa15.36■□□□□ 0.05
CSNK1E-201ENST00000359867 CCNA1P78396 465 aa15.36■□□□□ 0.05
CSNK1E-201ENST00000359867 PRR16Q569H4 304 aa15.36■□□□□ 0.05
CSNK1E-201ENST00000359867 TCP11X2Q5H9J9 407 aa15.36■□□□□ 0.05
CSNK1E-201ENST00000359867 LENG9Q96B70 501 aa15.36■□□□□ 0.05
CSNK1E-201ENST00000359867 GEMIN8Q9NWZ8 242 aaKnown RBP15.36■□□□□ 0.05
CSNK1E-201ENST00000359867 MAPK8IP1Q9UQF2 711 aa15.36■□□□□ 0.05
CSNK1E-201ENST00000359867 FAM86B1E9PN63 330 aa15.36■□□□□ 0.05
CSNK1E-201ENST00000359867 FAM86B2P0C5J1 330 aa15.36■□□□□ 0.05
CSNK1E-201ENST00000359867 RAD51AP2Q09MP3 1159 aa15.36■□□□□ 0.05
CSNK1E-201ENST00000359867 HAUS3Q68CZ6 603 aa15.36■□□□□ 0.05
CSNK1E-201ENST00000359867 C17orf99Q6UX52 265 aa15.36■□□□□ 0.05
CSNK1E-201ENST00000359867 ERMNQ8TAM6 284 aa15.36■□□□□ 0.05
CSNK1E-201ENST00000359867 MMP19Q99542 508 aa15.36■□□□□ 0.05
CSNK1E-201ENST00000359867 MROH8Q9H579 483 aa15.36■□□□□ 0.05
CSNK1E-201ENST00000359867 PXMP2Q9NR77 195 aa15.36■□□□□ 0.05
CSNK1E-201ENST00000359867 CENPFP49454 3210 aa15.36■□□□□ 0.05
CSNK1E-201ENST00000359867 ITIH6Q6UXX5 1313 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 KCNJ18B7U540 433 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 CA12O43570 354 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 MYCLP12524 364 aaPredicted RBP15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 H2AFXP16104 143 aaPredicted RBP15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 EEF1GP26641 437 aaKnown RBP15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 KCNJ12Q14500 433 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 KCTD2Q14681 263 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 KRT31Q15323 416 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 ARHGEF16Q5VV41 709 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 TTI2Q6NXR4 508 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 EP400NLQ6ZTU2 488 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 KCTD17Q8N5Z5 321 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 P2RX5Q93086 422 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 YY1AP1Q9H869 796 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 MAP3K20Q9NYL2 800 aaKnown RBP15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 PFASO15067 1338 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 RPTORQ8N122 1335 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 ZNFX1Q9P2E3 1918 aaKnown RBP15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 FCER1AP12319 257 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 ETF1P62495 437 aaKnown RBP15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 STK4Q13043 487 aa15.35■□□□□ 0.05
CSNK1E-201ENST00000359867 PGM5Q15124 567 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms