RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 SFR1Q86XK3 245 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 SCYL3Q8IZE3 742 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 IGDCC4Q8TDY8 1250 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 JPH2Q9BR39 696 aaPredicted RBP14.85□□□□□ -0.03
VCP-201ENST00000358901 DNAJC12Q9UKB3 198 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 SPHKAPQ2M3C7 1700 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 A0A0G2JLW4 131 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 CYP19A1P11511 503 aaPredicted RBP14.84□□□□□ -0.03
VCP-201ENST00000358901 FCER1AP12319 257 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 PEX19P40855 299 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 NT5C2P49902 561 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 EIF3BP55884 814 aaKnown RBP14.84□□□□□ -0.03
VCP-201ENST00000358901 ARHGEF18Q6ZSZ5 1173 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 PROM2Q8N271 834 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 SPZ1Q9BXG8 430 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 CTDNEP1O95476 244 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 HOXA7P31268 230 aaPredicted RBP14.84□□□□□ -0.03
VCP-201ENST00000358901 FXR1P51114 621 aaKnown RBP eCLIP14.84□□□□□ -0.039e-6■■■□□ 16.8
VCP-201ENST00000358901 TRIM50Q86XT4 487 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 AFAP1L2Q8N4X5 818 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 HAUS1Q96CS2 278 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 TRIM11Q96F44 468 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 POTEB3A0JP26 581 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 POTECB2RU33 542 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 EIF3CLB5ME19 914 aaKnown RBP14.84□□□□□ -0.03
VCP-201ENST00000358901 KCNJ6P48051 423 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 DYNLT1P63172 113 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 POTEBQ6S5H4 581 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 SRBD1Q8N5C6 995 aaKnown RBP14.84□□□□□ -0.03
VCP-201ENST00000358901 EIF3CQ99613 913 aaKnown RBP14.84□□□□□ -0.03
VCP-201ENST00000358901 AS3MTQ9HBK9 375 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 TUBE1Q9UJT0 475 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 NOD1Q9Y239 953 aa14.84□□□□□ -0.03
VCP-201ENST00000358901 BRINP3Q76B58 766 aa14.83□□□□□ -0.03
VCP-201ENST00000358901 STAG2Q8N3U4 1231 aa14.83□□□□□ -0.03
VCP-201ENST00000358901 GUF1Q8N442 669 aaKnown RBP14.83□□□□□ -0.03
VCP-201ENST00000358901 MIPOL1Q8TD10 442 aa14.83□□□□□ -0.03
VCP-201ENST00000358901 ADPGKQ9BRR6 497 aa14.83□□□□□ -0.03
VCP-201ENST00000358901 NUF2Q9BZD4 464 aa14.83□□□□□ -0.03
VCP-201ENST00000358901 DDX47Q9H0S4 455 aaKnown RBP14.83□□□□□ -0.03
VCP-201ENST00000358901 PFDN4Q9NQP4 134 aa14.83□□□□□ -0.03
VCP-201ENST00000358901 NRBP2Q9NSY0 501 aa14.83□□□□□ -0.03
VCP-201ENST00000358901 BARHL2Q9NY43 387 aa14.83□□□□□ -0.03
VCP-201ENST00000358901 CPDO75976 1380 aa14.83□□□□□ -0.03
VCP-201ENST00000358901 A0A1B0GTH6 734 aa14.83□□□□□ -0.04
VCP-201ENST00000358901 ANTXR2P58335 489 aa14.83□□□□□ -0.04
VCP-201ENST00000358901 NUGGCQ68CJ6 796 aa14.83□□□□□ -0.04
VCP-201ENST00000358901 GBP5Q96PP8 586 aa14.83□□□□□ -0.04
VCP-201ENST00000358901 PACSIN2Q9UNF0 486 aaPredicted RBP14.83□□□□□ -0.04
VCP-201ENST00000358901 CDC42BPBQ9Y5S2 1711 aa14.83□□□□□ -0.04
VCP-201ENST00000358901 ZBTB5O15062 677 aa14.83□□□□□ -0.04
VCP-201ENST00000358901 MAGEA9P43362 315 aa14.83□□□□□ -0.04
VCP-201ENST00000358901 COASYQ13057 564 aa14.83□□□□□ -0.04
VCP-201ENST00000358901 GDAP1Q8TB36 358 aa14.83□□□□□ -0.04
VCP-201ENST00000358901 A0A1W2PQC6 194 aa14.83□□□□□ -0.04
VCP-201ENST00000358901 CAPN9O14815 690 aa14.83□□□□□ -0.04
VCP-201ENST00000358901 TDP2O95551 362 aa14.83□□□□□ -0.04
VCP-201ENST00000358901 DCAF15Q66K64 600 aa14.83□□□□□ -0.04
VCP-201ENST00000358901 TADA2BQ86TJ2 420 aa14.83□□□□□ -0.04
VCP-201ENST00000358901 MAP7D3Q8IWC1 876 aa14.83□□□□□ -0.04
VCP-201ENST00000358901 RHOT2Q8IXI1 618 aa14.83□□□□□ -0.04
VCP-201ENST00000358901 COG1Q8WTW3 980 aa14.83□□□□□ -0.04
VCP-201ENST00000358901 LRRD1A4D1F6 860 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 INO80B-WBP1J3KQ70 363 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 NR3C1P04150 777 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 RAD54LQ92698 747 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 HPS3Q969F9 1004 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 ELAC2Q9BQ52 826 aaKnown RBP14.82□□□□□ -0.04
VCP-201ENST00000358901 INO80BQ9C086 356 aaPredicted RBP14.82□□□□□ -0.04
VCP-201ENST00000358901 SENP2Q9HC62 589 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 MRPL47Q9HD33 250 aaKnown RBP14.82□□□□□ -0.04
VCP-201ENST00000358901 QRICH2Q9H0J4 1663 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 EXOC1LA0A1B0GW35 172 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 FAM196BA6NMK8 535 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 EIF2AK2P19525 551 aaKnown RBP14.82□□□□□ -0.04
VCP-201ENST00000358901 SAT1P21673 171 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 TMC4Q7Z404 712 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 SPATA4Q8NEY3 305 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 MIS12Q9H081 205 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 NXF1Q9UBU9 619 aaKnown RBP14.82□□□□□ -0.04
VCP-201ENST00000358901 ADD3Q9UEY8 706 aaKnown RBP14.82□□□□□ -0.04
VCP-201ENST00000358901 CA4P22748 312 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 RWDD2BP57060 319 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 IGBP1P78318 339 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 TFAMQ00059 246 aaKnown RBP14.82□□□□□ -0.04
VCP-201ENST00000358901 PDE1BQ01064 536 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 RCN2Q14257 317 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 GRM4Q14833 912 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 PPP2R5AQ15172 486 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 ANKRD40Q6AI12 368 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 RFX6Q8HWS3 928 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 TC2NQ8N9U0 490 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 SLC17A8Q8NDX2 589 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 ENGASEQ8NFI3 743 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 FAM84BQ96KN1 310 aaPredicted RBP14.82□□□□□ -0.04
VCP-201ENST00000358901 CALN1Q9BXU9 219 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 TACC3Q9Y6A5 838 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 PNPLA7Q6ZV29 1317 aa14.82□□□□□ -0.04
VCP-201ENST00000358901 GH2P01242 217 aa14.81□□□□□ -0.04
VCP-201ENST00000358901 KRT1P04264 644 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms