RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 KCNK9Q9NPC2 374 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 GJA3Q9Y6H8 435 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 N4BP1O75113 896 aaKnown RBP13.36□□□□□ -0.27
COL20A1-201ENST00000358894 XKR9Q5GH70 373 aa13.36□□□□□ -0.27
COL20A1-201ENST00000358894 TMEM179Q6ZVK1 233 aa13.36□□□□□ -0.27
COL20A1-201ENST00000358894 B4GALNT4Q76KP1 1039 aa13.36□□□□□ -0.27
COL20A1-201ENST00000358894 TACO1Q9BSH4 297 aaKnown RBP13.36□□□□□ -0.27
COL20A1-201ENST00000358894 IMPG2Q9BZV3 1241 aa13.36□□□□□ -0.27
COL20A1-201ENST00000358894 ZBTB12Q9Y330 459 aaPredicted RBP13.36□□□□□ -0.27
COL20A1-201ENST00000358894 BZW2Q9Y6E2 419 aaKnown RBP13.36□□□□□ -0.27
COL20A1-201ENST00000358894 LRRC37A3O60309 1634 aa13.36□□□□□ -0.27
COL20A1-201ENST00000358894 A0A087WUV0 522 aaPredicted RBP13.36□□□□□ -0.27
COL20A1-201ENST00000358894 PRKG1Q13976 671 aa13.36□□□□□ -0.27
COL20A1-201ENST00000358894 AP1ARQ63HQ0 302 aa13.36□□□□□ -0.27
COL20A1-201ENST00000358894 EFCAB13Q8IY85 973 aa13.36□□□□□ -0.27
COL20A1-201ENST00000358894 SPATA4Q8NEY3 305 aa13.36□□□□□ -0.27
COL20A1-201ENST00000358894 LRRC1Q9BTT6 524 aa13.36□□□□□ -0.27
COL20A1-201ENST00000358894 JMJD4Q9H9V9 463 aa13.36□□□□□ -0.27
COL20A1-201ENST00000358894 PARVGQ9HBI0 331 aa13.36□□□□□ -0.27
COL20A1-201ENST00000358894 ASIC3Q9UHC3 531 aa13.36□□□□□ -0.27
COL20A1-201ENST00000358894 LMO7Q8WWI1 1683 aa13.36□□□□□ -0.27
COL20A1-201ENST00000358894 DLATP10515 647 aaKnown RBP13.36□□□□□ -0.27
COL20A1-201ENST00000358894 KRT27Q7Z3Y8 459 aa13.36□□□□□ -0.27
COL20A1-201ENST00000358894 SH3RF1Q7Z6J0 888 aa13.36□□□□□ -0.27
COL20A1-201ENST00000358894 ZNF446Q9NWS9 450 aa13.36□□□□□ -0.27
COL20A1-201ENST00000358894 RGL1Q9NZL6 768 aa13.36□□□□□ -0.27
COL20A1-201ENST00000358894 A0A1W2PRG0 241 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 VIMP08670 466 aaKnown RBP13.35□□□□□ -0.27
COL20A1-201ENST00000358894 VPS41P49754 854 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 MYL7Q01449 175 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 PDIA5Q14554 519 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 DPH6Q7L8W6 267 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 MS4A14Q96JA4 679 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 GEMIN8Q9NWZ8 242 aaKnown RBP13.35□□□□□ -0.27
COL20A1-201ENST00000358894 SNX12Q9UMY4 172 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 NR3C1P04150 777 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 FERP16591 822 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 ADRA2BP18089 450 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 TTLL12Q14166 644 aaPredicted RBP13.35□□□□□ -0.27
COL20A1-201ENST00000358894 MESDQ14696 234 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 PDXDC1Q6P996 788 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 CABS1Q96KC9 395 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 RTFDC1Q9BY42 306 aaPredicted RBP13.35□□□□□ -0.27
COL20A1-201ENST00000358894 FUT8Q9BYC5 575 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.35□□□□□ -0.27
COL20A1-201ENST00000358894 USTQ9Y2C2 406 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 PGRMC1O00264 195 aaKnown RBP13.35□□□□□ -0.27
COL20A1-201ENST00000358894 CCDC93Q567U6 631 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 SRLQ86TD4 932 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 HOOK3Q86VS8 718 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 CEP63Q96MT8 703 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 CXorf56Q9H5V9 222 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 SYNCQ9H7C4 482 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 EHD2Q9NZN4 543 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 ATRNO75882 1429 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 GRB10Q13322 594 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 WDR44Q5JSH3 913 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 KIFAP3Q92845 792 aa13.35□□□□□ -0.27
COL20A1-201ENST00000358894 ACTN1P12814 892 aa13.34□□□□□ -0.27
COL20A1-201ENST00000358894 AP3B2Q13367 1082 aa13.34□□□□□ -0.27
COL20A1-201ENST00000358894 ORC2Q13416 577 aaPredicted RBP13.34□□□□□ -0.27
COL20A1-201ENST00000358894 VPS72Q15906 364 aa13.34□□□□□ -0.27
COL20A1-201ENST00000358894 COG1Q8WTW3 980 aa13.34□□□□□ -0.27
COL20A1-201ENST00000358894 CNKSR1Q969H4 720 aa13.34□□□□□ -0.27
COL20A1-201ENST00000358894 SLC24A3Q9HC58 644 aa13.34□□□□□ -0.27
COL20A1-201ENST00000358894 POLLQ9UGP5 575 aa13.34□□□□□ -0.27
COL20A1-201ENST00000358894 BCS1LQ9Y276 419 aa13.34□□□□□ -0.27
COL20A1-201ENST00000358894 KDM3BQ7LBC6 1761 aa13.34□□□□□ -0.27
COL20A1-201ENST00000358894 FUT2Q10981 343 aa13.34□□□□□ -0.27
COL20A1-201ENST00000358894 KNOP1Q1ED39 458 aaKnown RBP13.34□□□□□ -0.27
COL20A1-201ENST00000358894 CDC42EP5Q6NZY7 148 aa13.34□□□□□ -0.27
COL20A1-201ENST00000358894 MRRFQ96E11 262 aaKnown RBP13.34□□□□□ -0.27
COL20A1-201ENST00000358894 HSD3B7Q9H2F3 369 aa13.34□□□□□ -0.27
COL20A1-201ENST00000358894 EXOC7Q9UPT5 735 aa13.34□□□□□ -0.27
COL20A1-201ENST00000358894 GAP43P17677 238 aa13.34□□□□□ -0.27
COL20A1-201ENST00000358894 NNTQ13423 1086 aa13.34□□□□□ -0.27
COL20A1-201ENST00000358894 PPP4R3CPQ6ZMV5 832 aa13.34□□□□□ -0.27
COL20A1-201ENST00000358894 DAGLBQ8NCG7 672 aa13.34□□□□□ -0.27
COL20A1-201ENST00000358894 NACC1Q96RE7 527 aa13.34□□□□□ -0.27
COL20A1-201ENST00000358894 RAB17Q9H0T7 212 aa13.34□□□□□ -0.27
COL20A1-201ENST00000358894 AFF2P51816 1311 aa13.34□□□□□ -0.27
COL20A1-201ENST00000358894 PSMD14O00487 310 aa13.33□□□□□ -0.27
COL20A1-201ENST00000358894 TNNI1P19237 187 aa13.33□□□□□ -0.27
COL20A1-201ENST00000358894 NFIAQ12857 509 aa13.33□□□□□ -0.27
COL20A1-201ENST00000358894 IL17AQ16552 155 aa13.33□□□□□ -0.27
COL20A1-201ENST00000358894 PPP1R18Q6NYC8 613 aa13.33□□□□□ -0.27
COL20A1-201ENST00000358894 NLRX1Q86UT6 975 aa13.33□□□□□ -0.27
COL20A1-201ENST00000358894 SUPT20HQ8NEM7 779 aa13.33□□□□□ -0.27
COL20A1-201ENST00000358894 DCAF4Q8WV16 495 aa13.33□□□□□ -0.27
COL20A1-201ENST00000358894 GJD4Q96KN9 370 aaPredicted RBP13.33□□□□□ -0.27
COL20A1-201ENST00000358894 IFT74Q96LB3 600 aa13.33□□□□□ -0.27
COL20A1-201ENST00000358894 GUCY2CP25092 1073 aa13.33□□□□□ -0.28
COL20A1-201ENST00000358894 PODNQ7Z5L7 613 aa13.33□□□□□ -0.28
COL20A1-201ENST00000358894 MASTLQ96GX5 879 aa13.33□□□□□ -0.28
COL20A1-201ENST00000358894 SEMA6BQ9H3T3 888 aa13.33□□□□□ -0.28
COL20A1-201ENST00000358894 STK32BQ9NY57 414 aa13.33□□□□□ -0.28
COL20A1-201ENST00000358894 BUB1BO60566 1050 aaPredicted RBP13.33□□□□□ -0.28
COL20A1-201ENST00000358894 ECM2O94769 699 aaPredicted RBP13.33□□□□□ -0.28
COL20A1-201ENST00000358894 PDCLQ13371 301 aa13.33□□□□□ -0.28
COL20A1-201ENST00000358894 NAALADL2Q58DX5 795 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms