RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 TNPO1Q92973 898 aaKnown RBP27.34■■□□□ 1.97
ALKAL1-201ENST00000358543 RNPEPQ9H4A4 650 aa27.34■■□□□ 1.97
ALKAL1-201ENST00000358543 GABBR1Q9UBS5 961 aa27.34■■□□□ 1.97
ALKAL1-201ENST00000358543 CEP131Q9UPN4 1083 aa27.34■■□□□ 1.97
ALKAL1-201ENST00000358543 ATP11BQ9Y2G3 1177 aa27.34■■□□□ 1.97
ALKAL1-201ENST00000358543 DCDC2CA8MYV0 355 aa27.33■■□□□ 1.97
ALKAL1-201ENST00000358543 BRD1O95696 1058 aa27.33■■□□□ 1.97
ALKAL1-201ENST00000358543 CHMP4BP1P59074 171 aa27.33■■□□□ 1.97
ALKAL1-201ENST00000358543 PDXDC2PQ6P474 469 aa27.33■■□□□ 1.97
ALKAL1-201ENST00000358543 HDAC6Q9UBN7 1215 aa27.33■■□□□ 1.97
ALKAL1-201ENST00000358543 GTF2IRD1Q9UHL9 959 aa27.33■■□□□ 1.97
ALKAL1-201ENST00000358543 DNAH12Q6ZR08 3092 aa27.33■■□□□ 1.97
ALKAL1-201ENST00000358543 ALPK3Q96L96 1907 aa27.32■■□□□ 1.96
ALKAL1-201ENST00000358543 EVI5O60447 810 aa27.32■■□□□ 1.96
ALKAL1-201ENST00000358543 CD4P01730 458 aa27.32■■□□□ 1.96
ALKAL1-201ENST00000358543 FXR2P51116 673 aaKnown RBP eCLIP27.32■■□□□ 1.96
ALKAL1-201ENST00000358543 PDIA5Q14554 519 aa27.32■■□□□ 1.96
ALKAL1-201ENST00000358543 FAM47CQ5HY64 1035 aa27.32■■□□□ 1.96
ALKAL1-201ENST00000358543 ARL6IP4Q66PJ3 421 aaKnown RBP27.32■■□□□ 1.96
ALKAL1-201ENST00000358543 FAM173BQ6P4H8 233 aa27.32■■□□□ 1.96
ALKAL1-201ENST00000358543 IGSF9BQ9UPX0 1349 aa27.32■■□□□ 1.96
ALKAL1-201ENST00000358543 TLR3O15455 904 aaKnown RBP27.31■■□□□ 1.96
ALKAL1-201ENST00000358543 PQBP1O60828 265 aaKnown RBP27.31■■□□□ 1.96
ALKAL1-201ENST00000358543 SMIM10L2AP0DMW4 78 aa27.31■■□□□ 1.96
ALKAL1-201ENST00000358543 SMIM10L2BP0DMW5 78 aa27.31■■□□□ 1.96
ALKAL1-201ENST00000358543 HOXC8P31273 242 aa27.31■■□□□ 1.96
ALKAL1-201ENST00000358543 DDIT3P35638 169 aa27.31■■□□□ 1.96
ALKAL1-201ENST00000358543 TECP42680 631 aa27.31■■□□□ 1.96
ALKAL1-201ENST00000358543 PLCB4Q15147 1175 aa27.31■■□□□ 1.96
ALKAL1-201ENST00000358543 SF3A1Q15459 793 aaKnown RBP27.31■■□□□ 1.96
ALKAL1-201ENST00000358543 TMEM266Q2M3C6 531 aa27.31■■□□□ 1.96
ALKAL1-201ENST00000358543 NCAPH2Q6IBW4 605 aa27.31■■□□□ 1.96
ALKAL1-201ENST00000358543 ATP6V0A1Q93050 837 aa27.31■■□□□ 1.96
ALKAL1-201ENST00000358543 DAXXQ9UER7 740 aaPredicted RBP27.31■■□□□ 1.96
ALKAL1-201ENST00000358543 ZDHHC9Q9Y397 364 aa27.31■■□□□ 1.96
ALKAL1-201ENST00000358543 MYH9P35579 1960 aaKnown RBP27.31■■□□□ 1.96
ALKAL1-201ENST00000358543 P4HBP07237 508 aaKnown RBP27.3■■□□□ 1.96
ALKAL1-201ENST00000358543 ATP4AP20648 1035 aa27.3■■□□□ 1.96
ALKAL1-201ENST00000358543 MARK3P27448 753 aa27.3■■□□□ 1.96
ALKAL1-201ENST00000358543 DTHD1Q6ZMT9 781 aa27.3■■□□□ 1.96
ALKAL1-201ENST00000358543 ATP8B4Q8TF62 1192 aa27.3■■□□□ 1.96
ALKAL1-201ENST00000358543 NRCAMQ92823 1304 aa27.3■■□□□ 1.96
ALKAL1-201ENST00000358543 POTEB3A0JP26 581 aa27.29■■□□□ 1.96
ALKAL1-201ENST00000358543 B4GALT4O60513 344 aa27.29■■□□□ 1.96
ALKAL1-201ENST00000358543 DKC1O60832 514 aaKnown RBP eCLIP27.29■■□□□ 1.96
ALKAL1-201ENST00000358543 GNAT1P11488 350 aa27.29■■□□□ 1.96
ALKAL1-201ENST00000358543 PSMC5P62195 406 aa27.29■■□□□ 1.96
ALKAL1-201ENST00000358543 FAAP100Q0VG06 881 aa27.29■■□□□ 1.96
ALKAL1-201ENST00000358543 FOXD4L5Q5VV16 416 aaPredicted RBP27.29■■□□□ 1.96
ALKAL1-201ENST00000358543 POTEBQ6S5H4 581 aa27.29■■□□□ 1.96
ALKAL1-201ENST00000358543 NEK9Q8TD19 979 aa27.29■■□□□ 1.96
ALKAL1-201ENST00000358543 PPP1R13LQ8WUF5 828 aa27.29■■□□□ 1.96
ALKAL1-201ENST00000358543 FOXD4L4Q8WXT5 416 aaPredicted RBP27.29■■□□□ 1.96
ALKAL1-201ENST00000358543 BBXQ8WY36 941 aaPredicted RBP27.29■■□□□ 1.96
ALKAL1-201ENST00000358543 FAM167AQ96KS9 214 aa27.29■■□□□ 1.96
ALKAL1-201ENST00000358543 ZNF396Q96N95 335 aaPredicted RBP27.29■■□□□ 1.96
ALKAL1-201ENST00000358543 HSD17B14Q9BPX1 270 aa27.29■■□□□ 1.96
ALKAL1-201ENST00000358543 RAB34Q9BZG1 259 aa27.29■■□□□ 1.96
ALKAL1-201ENST00000358543 TSHZ2Q9NRE2 1034 aa27.29■■□□□ 1.96
ALKAL1-201ENST00000358543 RBM19Q9Y4C8 960 aaKnown RBP27.29■■□□□ 1.96
ALKAL1-201ENST00000358543 MORC2Q9Y6X9 1032 aaPredicted RBP27.29■■□□□ 1.96
ALKAL1-201ENST00000358543 WDR81Q562E7 1941 aa27.29■■□□□ 1.96
ALKAL1-201ENST00000358543 C17orf102A2RUQ5 167 aa27.28■■□□□ 1.96
ALKAL1-201ENST00000358543 HBP1O60381 514 aa27.28■■□□□ 1.96
ALKAL1-201ENST00000358543 CLTBP09497 229 aa27.28■■□□□ 1.96
ALKAL1-201ENST00000358543 QARSP47897 775 aaKnown RBP27.28■■□□□ 1.96
ALKAL1-201ENST00000358543 PTPAQ15257 358 aa27.28■■□□□ 1.96
ALKAL1-201ENST00000358543 ATL3Q6DD88 541 aa27.28■■□□□ 1.96
ALKAL1-201ENST00000358543 GDF6Q6KF10 455 aaPredicted RBP27.28■■□□□ 1.96
ALKAL1-201ENST00000358543 IGSF22Q8N9C0 903 aa27.28■■□□□ 1.96
ALKAL1-201ENST00000358543 EIF2AK1Q9BQI3 630 aaKnown RBP27.28■■□□□ 1.96
ALKAL1-201ENST00000358543 TRPV6Q9H1D0 765 aa27.28■■□□□ 1.96
ALKAL1-201ENST00000358543 TRMT13Q9NUP7 481 aaKnown RBP27.28■■□□□ 1.96
ALKAL1-201ENST00000358543 TRPC6Q9Y210 931 aa27.28■■□□□ 1.96
ALKAL1-201ENST00000358543 NR2E3Q9Y5X4 410 aa27.28■■□□□ 1.96
ALKAL1-201ENST00000358543 CLIC4Q9Y696 253 aa27.28■■□□□ 1.96
ALKAL1-201ENST00000358543 STK24Q9Y6E0 443 aa27.28■■□□□ 1.96
ALKAL1-201ENST00000358543 POTEMA6NI47 508 aa27.27■■□□□ 1.96
ALKAL1-201ENST00000358543 RRN3P2A6NIE6 340 aa27.27■■□□□ 1.96
ALKAL1-201ENST00000358543 ZNF862O60290 1169 aa27.27■■□□□ 1.96
ALKAL1-201ENST00000358543 SLITRK3O94933 977 aa27.27■■□□□ 1.96
ALKAL1-201ENST00000358543 ADAM17P78536 824 aa27.27■■□□□ 1.96
ALKAL1-201ENST00000358543 NUCB2P80303 420 aa27.27■■□□□ 1.96
ALKAL1-201ENST00000358543 PPFIA1Q13136 1202 aa27.27■■□□□ 1.96
ALKAL1-201ENST00000358543 IL17AQ16552 155 aa27.27■■□□□ 1.96
ALKAL1-201ENST00000358543 PTGISQ16647 500 aa27.27■■□□□ 1.96
ALKAL1-201ENST00000358543 UGCGQ16739 394 aa27.27■■□□□ 1.96
ALKAL1-201ENST00000358543 CKAP2LQ8IYA6 745 aa27.27■■□□□ 1.96
ALKAL1-201ENST00000358543 C7orf61Q8IZ16 206 aa27.27■■□□□ 1.96
ALKAL1-201ENST00000358543 USP28Q96RU2 1077 aa27.27■■□□□ 1.96
ALKAL1-201ENST00000358543 NRBP2Q9NSY0 501 aa27.27■■□□□ 1.96
ALKAL1-201ENST00000358543 SETD4Q9NVD3 440 aa27.27■■□□□ 1.96
ALKAL1-201ENST00000358543 KAT6AQ92794 2004 aa27.27■■□□□ 1.96
ALKAL1-201ENST00000358543 INSRRP14616 1297 aa27.26■■□□□ 1.95
ALKAL1-201ENST00000358543 NASPP49321 788 aaPredicted RBP27.26■■□□□ 1.95
ALKAL1-201ENST00000358543 HIC1Q14526 733 aa27.26■■□□□ 1.95
ALKAL1-201ENST00000358543 BANK1Q8NDB2 785 aa27.26■■□□□ 1.95
ALKAL1-201ENST00000358543 ERMNQ8TAM6 284 aa27.26■■□□□ 1.95
ALKAL1-201ENST00000358543 FTOQ9C0B1 505 aaKnown RBP eCLIP27.26■■□□□ 1.95
ALKAL1-201ENST00000358543 PDLIM7Q9NR12 457 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms