RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 RANBP17Q9H2T7 1088 aaKnown RBP17.65■□□□□ 0.42
PTPN5-201ENST00000358540 NLRC4Q9NPP4 1024 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 PIM2Q9P1W9 311 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 COL4A3BPQ9Y5P4 624 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 ABCB11O95342 1321 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 SRCAPQ6ZRS2 3230 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 PHACTR2O75167 634 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 PRPF6O94906 941 aaKnown RBP17.65■□□□□ 0.42
PTPN5-201ENST00000358540 FGFR1OPO95684 399 aaKnown RBP17.65■□□□□ 0.42
PTPN5-201ENST00000358540 MYBP10242 640 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 CIITAP33076 1130 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 RRAGAQ7L523 313 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 GPATCH11Q8N954 259 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 AGBL3Q8NEM8 1001 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 FAM20AQ96MK3 541 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 RGPD3A6NKT7 1758 aaPredicted RBP17.65■□□□□ 0.42
PTPN5-201ENST00000358540 RGPD4Q7Z3J3 1758 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 TBX3O15119 743 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 MEA1Q16626 185 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 LRCH2Q5VUJ6 765 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 DYDC2Q96IM9 177 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 HDAC6Q9UBN7 1215 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 LRRC53A6NM62 1247 aa17.64■□□□□ 0.41
PTPN5-201ENST00000358540 ARP10275 920 aa17.64■□□□□ 0.41
PTPN5-201ENST00000358540 SAMD7Q7Z3H4 446 aa17.64■□□□□ 0.41
PTPN5-201ENST00000358540 JDP2Q8WYK2 163 aa17.64■□□□□ 0.41
PTPN5-201ENST00000358540 TAOK3Q9H2K8 898 aa17.64■□□□□ 0.41
PTPN5-201ENST00000358540 FZD1Q9UP38 647 aa17.64■□□□□ 0.41
PTPN5-201ENST00000358540 CCDC151A5D8V7 595 aa17.64■□□□□ 0.41
PTPN5-201ENST00000358540 PIK3CDO00329 1044 aa17.64■□□□□ 0.41
PTPN5-201ENST00000358540 GUCY2CP25092 1073 aa17.64■□□□□ 0.41
PTPN5-201ENST00000358540 SYT2Q8N9I0 419 aaPredicted RBP17.64■□□□□ 0.41
PTPN5-201ENST00000358540 NAPGQ99747 312 aaPredicted RBP17.64■□□□□ 0.41
PTPN5-201ENST00000358540 FAN1Q9Y2M0 1017 aa17.64■□□□□ 0.41
PTPN5-201ENST00000358540 MACROD2A1Z1Q3 448 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 KCNA1Q09470 495 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 RETREG2Q8NC44 543 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 KCTD10Q9H3F6 313 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 PLEKHA4Q9H4M7 779 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 SUGCTQ9HAC7 445 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 CCPG1Q9ULG6 757 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 RABGAP1Q9Y3P9 1069 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 MAP2K7O14733 419 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 KCNMA1Q12791 1236 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 ADAM9Q13443 819 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 ENOX2Q16206 610 aaKnown RBP17.63■□□□□ 0.41
PTPN5-201ENST00000358540 TBC1D10BQ4KMP7 808 aaPredicted RBP17.63■□□□□ 0.41
PTPN5-201ENST00000358540 SECISBP2LQ93073 1101 aaKnown RBP17.63■□□□□ 0.41
PTPN5-201ENST00000358540 JAKMIP2Q96AA8 810 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 PGAP2Q9UHJ9 254 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 GJA3Q9Y6H8 435 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 NFIBO00712 420 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 ZNF263O14978 683 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 CYLC1P35663 651 aaPredicted RBP17.63■□□□□ 0.41
PTPN5-201ENST00000358540 GRIPAP1Q4V328 841 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 DALRD3Q5D0E6 543 aaKnown RBP17.63■□□□□ 0.41
PTPN5-201ENST00000358540 MCTP2Q6DN12 878 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 TRMT1LQ7Z2T5 733 aaKnown RBP17.63■□□□□ 0.41
PTPN5-201ENST00000358540 FAM83AQ86UY5 434 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 CCDC42Q96M95 316 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 ARHGAP20Q9P2F6 1191 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 CDC23Q9UJX2 597 aa17.63■□□□□ 0.41
PTPN5-201ENST00000358540 GAS7O60861 476 aa17.62■□□□□ 0.41
PTPN5-201ENST00000358540 ASNSP08243 561 aa17.62■□□□□ 0.41
PTPN5-201ENST00000358540 CYP3A4P08684 503 aa17.62■□□□□ 0.41
PTPN5-201ENST00000358540 NR2F2P24468 414 aa17.62■□□□□ 0.41
PTPN5-201ENST00000358540 PRAMEF18Q5VWM3 479 aa17.62■□□□□ 0.41
PTPN5-201ENST00000358540 OTOP1Q7RTM1 612 aa17.62■□□□□ 0.41
PTPN5-201ENST00000358540 CACNA2D4Q7Z3S7 1137 aa17.62■□□□□ 0.41
PTPN5-201ENST00000358540 HOOK2Q96ED9 719 aa17.62■□□□□ 0.41
PTPN5-201ENST00000358540 MRPL11Q9Y3B7 192 aaKnown RBP17.62■□□□□ 0.41
PTPN5-201ENST00000358540 IPO7O95373 1038 aaKnown RBP17.62■□□□□ 0.41
PTPN5-201ENST00000358540 BRD3Q15059 726 aa17.62■□□□□ 0.41
PTPN5-201ENST00000358540 KSR1Q8IVT5 923 aa17.62■□□□□ 0.41
PTPN5-201ENST00000358540 LSM14BQ9BX40 385 aaKnown RBP17.62■□□□□ 0.41
PTPN5-201ENST00000358540 COL20A1Q9P218 1284 aa17.62■□□□□ 0.41
PTPN5-201ENST00000358540 WRAP73Q9P2S5 460 aaPredicted RBP17.62■□□□□ 0.41
PTPN5-201ENST00000358540 BCS1LQ9Y276 419 aa17.62■□□□□ 0.41
PTPN5-201ENST00000358540 FRMD3A2A2Y4 597 aa17.61■□□□□ 0.41
PTPN5-201ENST00000358540 NFKBIEO00221 500 aa17.61■□□□□ 0.41
PTPN5-201ENST00000358540 SRGAP2O75044 1071 aa17.61■□□□□ 0.41
PTPN5-201ENST00000358540 GCNT3O95395 438 aa17.61■□□□□ 0.41
PTPN5-201ENST00000358540 HOXD13P35453 343 aa17.61■□□□□ 0.41
PTPN5-201ENST00000358540 EIF4A3P38919 411 aaKnown RBP17.61■□□□□ 0.41
PTPN5-201ENST00000358540 CHMP4BP1P59074 171 aa17.61■□□□□ 0.41
PTPN5-201ENST00000358540 CCDC102AQ96A19 550 aa17.61■□□□□ 0.41
PTPN5-201ENST00000358540 DEF6Q9H4E7 631 aa17.61■□□□□ 0.41
PTPN5-201ENST00000358540 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.61■□□□□ 0.41
PTPN5-201ENST00000358540 TBC1D12O60347 775 aa17.61■□□□□ 0.41
PTPN5-201ENST00000358540 TBCAO75347 108 aaKnown RBP17.61■□□□□ 0.41
PTPN5-201ENST00000358540 RASSF7Q02833 373 aa17.61■□□□□ 0.41
PTPN5-201ENST00000358540 CEP55Q53EZ4 464 aa17.61■□□□□ 0.41
PTPN5-201ENST00000358540 HDXQ7Z353 690 aa17.61■□□□□ 0.41
PTPN5-201ENST00000358540 IL31RAQ8NI17 732 aa17.61■□□□□ 0.41
PTPN5-201ENST00000358540 ZBED3Q96IU2 234 aaPredicted RBP17.61■□□□□ 0.41
PTPN5-201ENST00000358540 ZNF577Q9BSK1 485 aa17.61■□□□□ 0.41
PTPN5-201ENST00000358540 RAVER2Q9HCJ3 691 aaKnown RBP17.61■□□□□ 0.41
PTPN5-201ENST00000358540 PSME4Q14997 1843 aa17.61■□□□□ 0.41
PTPN5-201ENST00000358540 CLIC2O15247 247 aa17.61■□□□□ 0.41
PTPN5-201ENST00000358540 PSMD10O75832 226 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms