RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 MCF2L2Q86YR7 1114 aa12.02□□□□□ -0.48
COL11A1-202ENST00000358392 TRIM55Q9BYV6 548 aa12.02□□□□□ -0.48
COL11A1-202ENST00000358392 ATG3Q9NT62 314 aa12.02□□□□□ -0.48
COL11A1-202ENST00000358392 PCDHA5Q9Y5H7 936 aa12.02□□□□□ -0.48
COL11A1-202ENST00000358392 PCDHA1Q9Y5I3 950 aa12.02□□□□□ -0.48
COL11A1-202ENST00000358392 A0A1W2PP64 1363 aa12.02□□□□□ -0.48
COL11A1-202ENST00000358392 BPIFB4P59827 614 aa12.02□□□□□ -0.48
COL11A1-202ENST00000358392 FAM98CQ17RN3 349 aaKnown RBP12.02□□□□□ -0.48
COL11A1-202ENST00000358392 LRRC4Q9HBW1 653 aa12.02□□□□□ -0.48
COL11A1-202ENST00000358392 POLR3AO14802 1390 aaPredicted RBP12.02□□□□□ -0.49
COL11A1-202ENST00000358392 TNRQ92752 1358 aa12.02□□□□□ -0.49
COL11A1-202ENST00000358392 FGAP02671 866 aa12.02□□□□□ -0.49
COL11A1-202ENST00000358392 ZFXP17010 805 aaPredicted RBP12.02□□□□□ -0.49
COL11A1-202ENST00000358392 TFDP1Q14186 410 aa12.02□□□□□ -0.49
COL11A1-202ENST00000358392 NBPF10Q6P3W6 841 aaKnown RBP12.02□□□□□ -0.49
COL11A1-202ENST00000358392 NEK9Q8TD19 979 aa12.02□□□□□ -0.49
COL11A1-202ENST00000358392 ACCSQ96QU6 501 aa12.02□□□□□ -0.49
COL11A1-202ENST00000358392 HPS4Q9NQG7 708 aa12.02□□□□□ -0.49
COL11A1-202ENST00000358392 CYP27A1Q02318 531 aa12.02□□□□□ -0.49
COL11A1-202ENST00000358392 RBBP7Q16576 425 aa12.02□□□□□ -0.49
COL11A1-202ENST00000358392 PASD1Q8IV76 773 aa12.02□□□□□ -0.49
COL11A1-202ENST00000358392 LBHD1Q9BQE6 289 aaPredicted RBP12.02□□□□□ -0.49
COL11A1-202ENST00000358392 KLC2Q9H0B6 622 aa12.02□□□□□ -0.49
COL11A1-202ENST00000358392 SLC52A2Q9HAB3 445 aa12.02□□□□□ -0.49
COL11A1-202ENST00000358392 H0YCG3 227 aa12.02□□□□□ -0.49
COL11A1-202ENST00000358392 SNX2O60749 519 aa12.02□□□□□ -0.49
COL11A1-202ENST00000358392 PDIA3P30101 505 aaKnown RBP12.02□□□□□ -0.49
COL11A1-202ENST00000358392 PBKQ96KB5 322 aa12.02□□□□□ -0.49
COL11A1-202ENST00000358392 ZBTB18Q99592 522 aa12.02□□□□□ -0.49
COL11A1-202ENST00000358392 CCDC87Q9NVE4 849 aa12.02□□□□□ -0.49
COL11A1-202ENST00000358392 M0R2C6 588 aa12.02□□□□□ -0.49
COL11A1-202ENST00000358392 SLFN13Q68D06 897 aa12.02□□□□□ -0.49
COL11A1-202ENST00000358392 RNF135Q8IUD6 432 aa12.02□□□□□ -0.49
COL11A1-202ENST00000358392 CACTINQ8WUQ7 758 aaKnown RBP12.02□□□□□ -0.49
COL11A1-202ENST00000358392 CDV3Q9UKY7 258 aaKnown RBP12.02□□□□□ -0.49
COL11A1-202ENST00000358392 CLRN2A0PK11 232 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 TMEM247A6NEH6 219 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 CENPUQ71F23 418 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 SIX6OS1Q8N1H7 587 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 TRIM11Q96F44 468 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 ECT2Q9H8V3 914 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 HNRNPCP07910 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
COL11A1-202ENST00000358392 ATP5JP18859 108 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 HEMGNQ9BXL5 484 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 AFF4Q9UHB7 1163 aaKnown RBP12.01□□□□□ -0.49
COL11A1-202ENST00000358392 CFAP65Q6ZU64 1925 aaKnown RBP12.01□□□□□ -0.49
COL11A1-202ENST00000358392 COPEO14579 308 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 PJA2O43164 708 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 MED7O43513 233 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 MTERF2Q49AM1 385 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 PRPF38AQ8NAV1 312 aaKnown RBP12.01□□□□□ -0.49
COL11A1-202ENST00000358392 PARD3Q8TEW0 1356 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 MRC2Q9UBG0 1479 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 WDR64B1ANS9 1081 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 HSPA6P17066 643 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 SSTR3P32745 418 aaPredicted RBP12.01□□□□□ -0.49
COL11A1-202ENST00000358392 MRPS15P82914 257 aaKnown RBP12.01□□□□□ -0.49
COL11A1-202ENST00000358392 ZNF658Q5TYW1 1059 aaPredicted RBP12.01□□□□□ -0.49
COL11A1-202ENST00000358392 KIAA1841Q6NSI8 718 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 EPM2AIP1Q7L775 607 aaPredicted RBP12.01□□□□□ -0.49
COL11A1-202ENST00000358392 IP6K1Q92551 441 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 ZSWIM6Q9HCJ5 1215 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 SUN2Q9UH99 717 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 NEURL1BA8MQ27 555 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 DIAPH2O60879 1101 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 DCTN3O75935 186 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 SRGAP2CP0DJJ0 459 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 TAC1P20366 129 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 PSMA2P25787 234 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 LBRQ14739 615 aaKnown RBP12.01□□□□□ -0.49
COL11A1-202ENST00000358392 LRRC24Q50LG9 513 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 C6orf118Q5T5N4 469 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 KRT26Q7Z3Y9 468 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 DPP9Q86TI2 863 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 MAP3K19Q56UN5 1328 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 CARMIL3Q8ND23 1372 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 SFI1A8K8P3 1242 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 TOM1O60784 492 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 MDM2Q00987 491 aaPredicted RBP12.01□□□□□ -0.49
COL11A1-202ENST00000358392 MIS18BP1Q6P0N0 1132 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 CARD14Q9BXL6 1004 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 OSBPL1AQ9BXW6 950 aa12.01□□□□□ -0.49
COL11A1-202ENST00000358392 SERPING1P05155 500 aa12□□□□□ -0.49
COL11A1-202ENST00000358392 MKRN3Q13064 507 aaKnown RBP12□□□□□ -0.49
COL11A1-202ENST00000358392 MCTP2Q6DN12 878 aa12□□□□□ -0.49
COL11A1-202ENST00000358392 DNAJC10Q8IXB1 793 aa12□□□□□ -0.49
COL11A1-202ENST00000358392 ARL8AQ96BM9 186 aa12□□□□□ -0.49
COL11A1-202ENST00000358392 VPS11Q9H270 941 aa12□□□□□ -0.49
COL11A1-202ENST00000358392 DBNLQ9UJU6 430 aaKnown RBP12□□□□□ -0.49
COL11A1-202ENST00000358392 TTC7AQ9ULT0 858 aaPredicted RBP12□□□□□ -0.49
COL11A1-202ENST00000358392 APOBEC2Q9Y235 224 aaKnown RBP12□□□□□ -0.49
COL11A1-202ENST00000358392 POU5F1BQ06416 359 aa12□□□□□ -0.49
COL11A1-202ENST00000358392 MXD4Q14582 209 aaPredicted RBP12□□□□□ -0.49
COL11A1-202ENST00000358392 HIF1AQ16665 826 aa12□□□□□ -0.49
COL11A1-202ENST00000358392 PPP6R3Q5H9R7 873 aaPredicted RBP12□□□□□ -0.49
COL11A1-202ENST00000358392 RETREG2Q8NC44 543 aa12□□□□□ -0.49
COL11A1-202ENST00000358392 RNF139Q8WU17 664 aa12□□□□□ -0.49
COL11A1-202ENST00000358392 EDEM3Q9BZQ6 932 aa12□□□□□ -0.49
COL11A1-202ENST00000358392 PCDHA4Q9UN74 947 aa12□□□□□ -0.49
COL11A1-202ENST00000358392 BCS1LQ9Y276 419 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms