RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 KIF5BP33176 963 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 CUL4BQ13620 913 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 SGSM1Q2NKQ1 1148 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 DACT2Q5SW24 774 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 PPP4R3AQ6IN85 833 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 EXOC3L1Q86VI1 746 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 MICALL2Q8IY33 904 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 LRRC1Q9BTT6 524 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 AGAP1Q9UPQ3 857 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 FAM205AQ6ZU69 1335 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 LOC285556D6RIA3 1793 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 PENKP01210 267 aaPredicted RBP10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 UQCRFS1P1P0C7P4 283 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 IL1R1P14778 569 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 ZNF18P17022 549 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 ALDH5A1P51649 535 aaPredicted RBP10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 ERVK-24P63145 666 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 GUCY1B3Q02153 619 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 CCDC38Q502W7 563 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 OR52E8Q6IFG1 317 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 LCA5Q86VQ0 697 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 KCNQ5Q9NR82 932 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 TFR2Q9UP52 801 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 SAR1BQ9Y6B6 198 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 SLC4A4Q9Y6R1 1079 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 B4E1Z4 1266 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 FAM200BP0CF97 657 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 RPS6KB1P23443 525 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 TMOD1P28289 359 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 HPDP32754 393 aaPredicted RBP10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 CBX3Q13185 183 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 NR1I3Q14994 352 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 TSNAXIP1Q2TAA8 658 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 EAPPQ56P03 285 aaPredicted RBP10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 PALB2Q86YC2 1186 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 SLC15A3Q8IY34 581 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 ZNF384Q8TF68 577 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 CCT8L1PA6NM43 557 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 PHF20L1A8MW92 1017 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 USP46P62068 366 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 PNOCQ13519 176 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 GLE1Q53GS7 698 aaKnown RBP10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 TMEM154Q6P9G4 183 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 OLFML1Q6UWY5 402 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 HOOK3Q86VS8 718 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 TBC1D10CQ8IV04 446 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 FOXP4Q8IVH2 680 aaPredicted RBP10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 CCDC155Q8N6L0 562 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 HELLSQ9NRZ9 838 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 CLIC4Q9Y696 253 aa10.18□□□□□ -0.78
SMARCAL1-202ENST00000358207 ZNF213O14771 459 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 CA8P35219 290 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 MRPS35P82673 323 aaKnown RBP10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 FMR1Q06787 632 aaKnown RBP eCLIP10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 SF3A3Q12874 501 aaKnown RBP eCLIP10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 PAPD7Q5XG87 772 aaKnown RBP10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 SLF2Q8IX21 1173 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 LINC00301Q8NCQ3 95 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 ATP6V1G3Q96LB4 118 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 MED15Q96RN5 788 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.17□□□□□ -0.785e-6■■■□□ 16.3
SMARCAL1-202ENST00000358207 MRIQ9BWK5 157 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 NAPBQ9H115 298 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 EPB41L4AQ9HCS5 686 aaPredicted RBP10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 GJB4Q9NTQ9 266 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 SLC12A6Q9UHW9 1150 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 ZMYND8Q9ULU4 1186 aaPredicted RBP10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 GUCA1BQ9UMX6 200 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 WDR37Q9Y2I8 494 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 GJA3Q9Y6H8 435 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 COL2A1P02458 1487 aaPredicted RBP10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 USP17L3A6NCW0 530 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 USP17L4A6NCW7 530 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 SPATA31D3P0C874 917 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 SLURP2P0DP57 97 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 ALOX15P16050 662 aaPredicted RBP10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 ATP2A2P16615 1042 aaKnown RBP10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 RGMBQ6NW40 437 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 SPATA31D4Q6ZUB0 917 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 USP17L1Q7RTZ2 530 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 P3H4Q92791 437 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 CCDC43Q96MW1 224 aaKnown RBP10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 NAA15Q9BXJ9 866 aaKnown RBP10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 OXCT2Q9BYC2 517 aaPredicted RBP10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 DLGAP2Q9P1A6 1054 aa10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 REXO2Q9Y3B8 237 aaKnown RBP10.17□□□□□ -0.78
SMARCAL1-202ENST00000358207 ABLIM1O14639 778 aa10.16□□□□□ -0.78
SMARCAL1-202ENST00000358207 FAM153BP0C7A2 387 aa10.16□□□□□ -0.78
SMARCAL1-202ENST00000358207 PFKFB1P16118 471 aa10.16□□□□□ -0.78
SMARCAL1-202ENST00000358207 EPHB4P54760 987 aa10.16□□□□□ -0.78
SMARCAL1-202ENST00000358207 MECOMQ03112 1051 aa10.16□□□□□ -0.78
SMARCAL1-202ENST00000358207 ADCY1Q08828 1119 aa10.16□□□□□ -0.78
SMARCAL1-202ENST00000358207 UBE4AQ14139 1066 aa10.16□□□□□ -0.78
SMARCAL1-202ENST00000358207 FAM153CQ494X1 144 aa10.16□□□□□ -0.78
SMARCAL1-202ENST00000358207 NAA16Q6N069 864 aaPredicted RBP10.16□□□□□ -0.78
SMARCAL1-202ENST00000358207 C16orf87Q6PH81 154 aa10.16□□□□□ -0.78
SMARCAL1-202ENST00000358207 CMTR1Q8N1G2 835 aaKnown RBP10.16□□□□□ -0.78
SMARCAL1-202ENST00000358207 CAVIN3Q969G5 261 aa10.16□□□□□ -0.78
SMARCAL1-202ENST00000358207 FGD4Q96M96 766 aa10.16□□□□□ -0.78
SMARCAL1-202ENST00000358207 DBNDD1Q9H9R9 158 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms