RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 CETN3O15182 167 aa22.47■■□□□ 1.19
COL13A1-202ENST00000357811 IVLP07476 585 aa22.47■■□□□ 1.19
COL13A1-202ENST00000357811 POLD1P28340 1107 aa22.47■■□□□ 1.19
COL13A1-202ENST00000357811 PIGOQ8TEQ8 1089 aa22.47■■□□□ 1.19
COL13A1-202ENST00000357811 TEKT1Q969V4 418 aa22.47■■□□□ 1.19
COL13A1-202ENST00000357811 BHMT2Q9H2M3 363 aa22.47■■□□□ 1.19
COL13A1-202ENST00000357811 BCS1LQ9Y276 419 aa22.47■■□□□ 1.19
COL13A1-202ENST00000357811 ATF5Q9Y2D1 282 aaPredicted RBP22.47■■□□□ 1.19
COL13A1-202ENST00000357811 PCDHB13Q9Y5F0 798 aa22.47■■□□□ 1.19
COL13A1-202ENST00000357811 SSU72P8A0A1W2PR75 194 aa22.47■■□□□ 1.19
COL13A1-202ENST00000357811 FAM86B1E9PN63 330 aa22.47■■□□□ 1.19
COL13A1-202ENST00000357811 ZBTB39O15060 712 aa22.47■■□□□ 1.19
COL13A1-202ENST00000357811 FAM86B2P0C5J1 330 aa22.47■■□□□ 1.19
COL13A1-202ENST00000357811 POLRMTO00411 1230 aaKnown RBP22.46■■□□□ 1.19
COL13A1-202ENST00000357811 KCNK3O14649 394 aa22.46■■□□□ 1.19
COL13A1-202ENST00000357811 MEIS2O14770 477 aa22.46■■□□□ 1.19
COL13A1-202ENST00000357811 PJA2O43164 708 aa22.46■■□□□ 1.19
COL13A1-202ENST00000357811 SLC18A3Q16572 532 aa22.46■■□□□ 1.19
COL13A1-202ENST00000357811 CERKLQ49MI3 558 aaPredicted RBP22.46■■□□□ 1.19
COL13A1-202ENST00000357811 IQCDQ96DY2 449 aa22.46■■□□□ 1.19
COL13A1-202ENST00000357811 COA1Q9GZY4 146 aa22.46■■□□□ 1.19
COL13A1-202ENST00000357811 SLC12A3P55017 1021 aa22.46■■□□□ 1.19
COL13A1-202ENST00000357811 SLC20A2Q08357 652 aa22.46■■□□□ 1.19
COL13A1-202ENST00000357811 CCDC43Q96MW1 224 aaKnown RBP22.46■■□□□ 1.19
COL13A1-202ENST00000357811 KDM3AQ9Y4C1 1321 aa22.46■■□□□ 1.19
COL13A1-202ENST00000357811 AJAP1Q9UKB5 411 aaPredicted RBP22.45■■□□□ 1.18
COL13A1-202ENST00000357811 TMCO5BA8MYB1 307 aa22.45■■□□□ 1.18
COL13A1-202ENST00000357811 CRKP46108 304 aa22.45■■□□□ 1.18
COL13A1-202ENST00000357811 CCT5P48643 541 aa22.45■■□□□ 1.18
COL13A1-202ENST00000357811 MEX3CQ5U5Q3 659 aaKnown RBP22.45■■□□□ 1.18
COL13A1-202ENST00000357811 ZNF571Q7Z3V5 609 aaPredicted RBP22.45■■□□□ 1.18
COL13A1-202ENST00000357811 AP1M1Q9BXS5 423 aa22.45■■□□□ 1.18
COL13A1-202ENST00000357811 ARMCX3Q9UH62 379 aaPredicted RBP22.45■■□□□ 1.18
COL13A1-202ENST00000357811 ABCB11O95342 1321 aa22.45■■□□□ 1.18
COL13A1-202ENST00000357811 GRID2IPA4D2P6 1211 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 TRIM37O94972 964 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 GCNT3O95395 438 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 GCFC2P16383 781 aaKnown RBP22.44■■□□□ 1.18
COL13A1-202ENST00000357811 GIT2Q14161 759 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 NAB2Q15742 525 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 CENPHQ9H3R5 247 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 KCNMB3Q9NPA1 279 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 SWAP70Q9UH65 585 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 PLIN4Q96Q06 1357 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 AKAP3O75969 853 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 PRLRP16471 622 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 HOXD13P35453 343 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 TRMT1LQ7Z2T5 733 aaKnown RBP22.44■■□□□ 1.18
COL13A1-202ENST00000357811 SEPT12Q8IYM1 358 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 ZIM3Q96PE6 472 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 RASSF4Q9H2L5 321 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 DNM3Q9UQ16 869 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 EPHB4P54760 987 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 TTMPQ5BVD1 217 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 PPP1R18Q6NYC8 613 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 CEP63Q96MT8 703 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 RUSC1Q9BVN2 902 aa22.44■■□□□ 1.18
COL13A1-202ENST00000357811 ZNF76P36508 570 aa22.43■■□□□ 1.18
COL13A1-202ENST00000357811 GNGT1P63211 74 aa22.43■■□□□ 1.18
COL13A1-202ENST00000357811 ICA1Q05084 483 aa22.43■■□□□ 1.18
COL13A1-202ENST00000357811 CTTNQ14247 550 aaKnown RBP22.43■■□□□ 1.18
COL13A1-202ENST00000357811 ZNF622Q969S3 477 aaKnown RBP eCLIP22.43■■□□□ 1.18
COL13A1-202ENST00000357811 GANQ9H2C0 597 aa22.43■■□□□ 1.18
COL13A1-202ENST00000357811 F5H6K3 240 aa22.43■■□□□ 1.18
COL13A1-202ENST00000357811 HSF2BPO75031 334 aa22.43■■□□□ 1.18
COL13A1-202ENST00000357811 SPATA31C1P0DKV0 1188 aa22.43■■□□□ 1.18
COL13A1-202ENST00000357811 UCHL3P15374 230 aa22.43■■□□□ 1.18
COL13A1-202ENST00000357811 KLRC3Q07444 240 aa22.43■■□□□ 1.18
COL13A1-202ENST00000357811 DDX42Q86XP3 938 aaKnown RBP eCLIP22.43■■□□□ 1.18
COL13A1-202ENST00000357811 RBM46Q8TBY0 533 aaKnown RBP22.43■■□□□ 1.18
COL13A1-202ENST00000357811 SAMM50Q9Y512 469 aa22.43■■□□□ 1.18
COL13A1-202ENST00000357811 ADAMTSL1Q8N6G6 1762 aa22.42■■□□□ 1.18
COL13A1-202ENST00000357811 SPDYE3A6NKU9 549 aa22.42■■□□□ 1.18
COL13A1-202ENST00000357811 ZEB2O60315 1214 aa22.42■■□□□ 1.18
COL13A1-202ENST00000357811 HOXA10P31260 410 aaPredicted RBP22.42■■□□□ 1.18
COL13A1-202ENST00000357811 IRAK1P51617 712 aa22.42■■□□□ 1.18
COL13A1-202ENST00000357811 JAG1P78504 1218 aa22.42■■□□□ 1.18
COL13A1-202ENST00000357811 PDCLQ13371 301 aa22.42■■□□□ 1.18
COL13A1-202ENST00000357811 HLTFQ14527 1009 aaKnown RBP eCLIP22.42■■□□□ 1.18
COL13A1-202ENST00000357811 MSL1Q68DK7 614 aa22.42■■□□□ 1.18
COL13A1-202ENST00000357811 SP8Q8IXZ3 490 aa22.42■■□□□ 1.18
COL13A1-202ENST00000357811 CEP104O60308 925 aa22.42■■□□□ 1.18
COL13A1-202ENST00000357811 EXOC3L4Q17RC7 722 aa22.42■■□□□ 1.18
COL13A1-202ENST00000357811 ZC2HC1CQ53FD0 456 aaPredicted RBP22.42■■□□□ 1.18
COL13A1-202ENST00000357811 SIAH1Q8IUQ4 282 aa22.42■■□□□ 1.18
COL13A1-202ENST00000357811 RNF10Q8N5U6 811 aaKnown RBP22.42■■□□□ 1.18
COL13A1-202ENST00000357811 GJD4Q96KN9 370 aaPredicted RBP22.42■■□□□ 1.18
COL13A1-202ENST00000357811 CRAMP1Q96RY5 1269 aa22.42■■□□□ 1.18
COL13A1-202ENST00000357811 SMCHD1A6NHR9 2005 aa22.42■■□□□ 1.18
COL13A1-202ENST00000357811 EML1O00423 815 aa22.41■■□□□ 1.18
COL13A1-202ENST00000357811 PLS1Q14651 629 aa22.41■■□□□ 1.18
COL13A1-202ENST00000357811 SH3BP5LQ7L8J4 393 aa22.41■■□□□ 1.18
COL13A1-202ENST00000357811 RAD51CO43502 376 aa22.41■■□□□ 1.18
COL13A1-202ENST00000357811 XRCC5P13010 732 aaKnown RBP22.41■■□□□ 1.18
COL13A1-202ENST00000357811 IRX3P78415 501 aaPredicted RBP22.41■■□□□ 1.18
COL13A1-202ENST00000357811 SPIRE1Q08AE8 756 aa22.41■■□□□ 1.18
COL13A1-202ENST00000357811 KNOP1Q1ED39 458 aaKnown RBP22.41■■□□□ 1.18
COL13A1-202ENST00000357811 CASKIN2Q8WXE0 1202 aa22.41■■□□□ 1.18
COL13A1-202ENST00000357811 CAPS2Q9BXY5 557 aa22.41■■□□□ 1.18
COL13A1-202ENST00000357811 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms