RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 FAM107BQ9H098 131 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 LRRC4CQ9HCJ2 640 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 SAMM50Q9Y512 469 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 ARFGEF1Q9Y6D6 1849 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 GRID2IPA4D2P6 1211 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 GOLGA6CA6NDK9 693 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 TMCO5BA8MYB1 307 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 GOLGA6DP0CG33 693 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 MRPL12P52815 198 aaKnown RBP16.76■□□□□ 0.27
PTBP1-203ENST00000356948 SPIRE1Q08AE8 756 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 KLHL30Q0D2K2 578 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 C8orf74Q6P047 294 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 NOX5Q96PH1 765 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 TSGA10Q9BZW7 698 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 GOLGA6AQ9NYA3 693 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 STIM2Q9P246 746 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 UBAP1LF5GYI3 381 aa16.75■□□□□ 0.27
PTBP1-203ENST00000356948 SLC9C1Q4G0N8 1177 aa16.75■□□□□ 0.27
PTBP1-203ENST00000356948 DPY19L2P1Q6NXN4 242 aa16.75■□□□□ 0.27
PTBP1-203ENST00000356948 PACS2Q86VP3 889 aa16.75■□□□□ 0.27
PTBP1-203ENST00000356948 FNBP4Q8N3X1 1017 aaPredicted RBP16.75■□□□□ 0.27
PTBP1-203ENST00000356948 ZIM3Q96PE6 472 aa16.75■□□□□ 0.27
PTBP1-203ENST00000356948 ATP6V0A2Q9Y487 856 aa16.75■□□□□ 0.27
PTBP1-203ENST00000356948 TAF1LQ8IZX4 1826 aa16.75■□□□□ 0.27
PTBP1-203ENST00000356948 BBOX1O75936 387 aa16.75■□□□□ 0.27
PTBP1-203ENST00000356948 GIT2Q14161 759 aa16.75■□□□□ 0.27
PTBP1-203ENST00000356948 TBC1D10BQ4KMP7 808 aaPredicted RBP16.75■□□□□ 0.27
PTBP1-203ENST00000356948 OR2W6PQ8NHA6 318 aa16.75■□□□□ 0.27
PTBP1-203ENST00000356948 ALS2CR12Q96Q35 445 aa16.75■□□□□ 0.27
PTBP1-203ENST00000356948 SH2D3AQ9BRG2 576 aa16.75■□□□□ 0.27
PTBP1-203ENST00000356948 GANQ9H2C0 597 aa16.75■□□□□ 0.27
PTBP1-203ENST00000356948 BHMT2Q9H2M3 363 aa16.75■□□□□ 0.27
PTBP1-203ENST00000356948 CHORDC1Q9UHD1 332 aaPredicted RBP16.75■□□□□ 0.27
PTBP1-203ENST00000356948 HEXIM1O94992 359 aaKnown RBP16.74■□□□□ 0.27
PTBP1-203ENST00000356948 SMARCA1P28370 1054 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 CTTNQ14247 550 aaKnown RBP16.74■□□□□ 0.27
PTBP1-203ENST00000356948 SLFN13Q68D06 897 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 PROM2Q8N271 834 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 LENG9Q96B70 501 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 DHX36Q9H2U1 1008 aaKnown RBP16.74■□□□□ 0.27
PTBP1-203ENST00000356948 KCNMB3Q9NPA1 279 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 CEP72Q9P209 647 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 PCDHB13Q9Y5F0 798 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 OPLAHO14841 1288 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 ARHGAP4P98171 946 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 CHADLQ6NUI6 762 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 TEX2Q8IWB9 1127 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 SEPT12Q8IYM1 358 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 HDAC9Q9UKV0 1011 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 COPB2P35606 906 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 CCT5P48643 541 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 MAP9Q49MG5 647 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 KIAA1755Q5JYT7 1200 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 ZNF526Q8TF50 670 aaPredicted RBP16.74■□□□□ 0.27
PTBP1-203ENST00000356948 CASKIN2Q8WXE0 1202 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 PPM1EQ8WY54 764 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 VIPAS39Q9H9C1 493 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 FAM198AQ9UFP1 575 aa16.74■□□□□ 0.27
PTBP1-203ENST00000356948 ECM2O94769 699 aaPredicted RBP16.73■□□□□ 0.27
PTBP1-203ENST00000356948 PDCLQ13371 301 aa16.73■□□□□ 0.27
PTBP1-203ENST00000356948 ADAT2Q7Z6V5 191 aaKnown RBP16.73■□□□□ 0.27
PTBP1-203ENST00000356948 TBC1D22AQ8WUA7 517 aa16.73■□□□□ 0.27
PTBP1-203ENST00000356948 ELMO3Q96BJ8 720 aa16.73■□□□□ 0.27
PTBP1-203ENST00000356948 CCDC43Q96MW1 224 aaKnown RBP16.73■□□□□ 0.27
PTBP1-203ENST00000356948 KCNK3O14649 394 aa16.73■□□□□ 0.27
PTBP1-203ENST00000356948 PJA2O43164 708 aa16.73■□□□□ 0.27
PTBP1-203ENST00000356948 SERPING1P05155 500 aa16.73■□□□□ 0.27
PTBP1-203ENST00000356948 NMT1P30419 496 aaKnown RBP16.73■□□□□ 0.27
PTBP1-203ENST00000356948 CRKP46108 304 aa16.73■□□□□ 0.27
PTBP1-203ENST00000356948 IRAK1P51617 712 aa16.73■□□□□ 0.27
PTBP1-203ENST00000356948 PLS1Q14651 629 aa16.73■□□□□ 0.27
PTBP1-203ENST00000356948 IRF2BP2Q7Z5L9 587 aa16.73■□□□□ 0.27
PTBP1-203ENST00000356948 ACBD3Q9H3P7 528 aa16.73■□□□□ 0.27
PTBP1-203ENST00000356948 A0A1W2PRG0 241 aa16.73■□□□□ 0.27
PTBP1-203ENST00000356948 RAD51CO43502 376 aa16.73■□□□□ 0.27
PTBP1-203ENST00000356948 ITGA4P13612 1032 aa16.73■□□□□ 0.27
PTBP1-203ENST00000356948 EPS15P42566 896 aa16.73■□□□□ 0.27
PTBP1-203ENST00000356948 ECE1P42892 770 aa16.73■□□□□ 0.27
PTBP1-203ENST00000356948 NOP2P46087 812 aaKnown RBP16.73■□□□□ 0.27
PTBP1-203ENST00000356948 SLC18A3Q16572 532 aa16.73■□□□□ 0.27
PTBP1-203ENST00000356948 ETNPPLQ8TBG4 499 aa16.73■□□□□ 0.27
PTBP1-203ENST00000356948 RDXP35241 583 aaKnown RBP16.72■□□□□ 0.27
PTBP1-203ENST00000356948 MAP2K2P36507 400 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 NAB2Q15742 525 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 MAEAQ7L5Y9 396 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 CCDC65Q8IXS2 484 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 NHSQ6T4R5 1651 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 ZNF233A6NK53 670 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 F5H6K3 240 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 G3V3G9 751 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 TCP1P17987 556 aaKnown RBP16.72■□□□□ 0.27
PTBP1-203ENST00000356948 FLT3P36888 993 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 TUBB4BP68371 445 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 KLRC3Q07444 240 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 DCAF8Q5TAQ9 597 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 RDH13Q8NBN7 331 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 PIK3R5Q8WYR1 880 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 BMP2KQ9NSY1 1161 aaPredicted RBP16.72■□□□□ 0.27
PTBP1-203ENST00000356948 UCHL3P15374 230 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 PON1P27169 355 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms