RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 PALD1Q9ULE6 856 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 TCF3P15923 654 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 SLC10A5Q5PT55 438 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 FBXO41Q8TF61 875 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 CLIC6Q96NY7 704 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 PJA2O43164 708 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 TBC1D12O60347 775 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 NR2F2P24468 414 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 KLC2Q9H0B6 622 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 GADD45BO75293 160 aaPredicted RBP18.53■□□□□ 0.56
COL27A1-201ENST00000356083 IMPDH2P12268 514 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 SSTR3P32745 418 aaPredicted RBP18.53■□□□□ 0.56
COL27A1-201ENST00000356083 LRRC41Q15345 812 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 FAF2Q96CS3 445 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 ZFP42Q96MM3 310 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 GCNT4Q9P109 453 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 GOLGA8IPA6NC78 632 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 GOLGA8JA6NMD2 632 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 EIF3CLB5ME19 914 aaKnown RBP18.53■□□□□ 0.56
COL27A1-201ENST00000356083 VCAM1P19320 739 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 HDLBPQ00341 1268 aaKnown RBP18.53■□□□□ 0.56
COL27A1-201ENST00000356083 EYA1Q99502 592 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 EIF3CQ99613 913 aaKnown RBP18.53■□□□□ 0.56
COL27A1-201ENST00000356083 WDR17Q8IZU2 1322 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 ARHGAP10A1A4S6 786 aa18.52■□□□□ 0.56
COL27A1-201ENST00000356083 BPIFB4P59827 614 aa18.52■□□□□ 0.56
COL27A1-201ENST00000356083 DHX38Q92620 1227 aaKnown RBP18.52■□□□□ 0.56
COL27A1-201ENST00000356083 C11orf74Q86VG3 221 aa18.52■□□□□ 0.56
COL27A1-201ENST00000356083 CEP70Q8NHQ1 597 aa18.52■□□□□ 0.56
COL27A1-201ENST00000356083 TMEM161AQ9NX61 479 aa18.52■□□□□ 0.56
COL27A1-201ENST00000356083 EFCAB8A8MWE9 144 aa18.52■□□□□ 0.56
COL27A1-201ENST00000356083 PTPN21Q16825 1174 aa18.52■□□□□ 0.56
COL27A1-201ENST00000356083 OTUD7AQ8TE49 926 aaPredicted RBP18.52■□□□□ 0.56
COL27A1-201ENST00000356083 PYROXD1Q8WU10 500 aa18.52■□□□□ 0.56
COL27A1-201ENST00000356083 SPON2Q9BUD6 331 aa18.52■□□□□ 0.56
COL27A1-201ENST00000356083 CCT5P48643 541 aa18.52■□□□□ 0.56
COL27A1-201ENST00000356083 ERFEQ4G0M1 354 aa18.52■□□□□ 0.56
COL27A1-201ENST00000356083 RFWD2Q8NHY2 731 aa18.52■□□□□ 0.56
COL27A1-201ENST00000356083 RUBCNLQ9H714 662 aa18.52■□□□□ 0.56
COL27A1-201ENST00000356083 STX18Q9P2W9 335 aaKnown RBP18.52■□□□□ 0.56
COL27A1-201ENST00000356083 PPEF1O14829 653 aaPredicted RBP18.52■□□□□ 0.55
COL27A1-201ENST00000356083 UPP2O95045 317 aa18.52■□□□□ 0.55
COL27A1-201ENST00000356083 ABCC1P33527 1531 aa18.52■□□□□ 0.55
COL27A1-201ENST00000356083 H2AFZP0C0S5 128 aa18.52■□□□□ 0.55
COL27A1-201ENST00000356083 GCKRQ14397 625 aa18.52■□□□□ 0.55
COL27A1-201ENST00000356083 H2AFVQ71UI9 128 aa18.52■□□□□ 0.55
COL27A1-201ENST00000356083 TRIML2Q8N7C3 387 aa18.52■□□□□ 0.55
COL27A1-201ENST00000356083 QTRT2Q9H974 415 aaKnown RBP18.52■□□□□ 0.55
COL27A1-201ENST00000356083 PSMC2P35998 433 aaKnown RBP18.51■□□□□ 0.55
COL27A1-201ENST00000356083 SPDYAQ5MJ70 313 aa18.51■□□□□ 0.55
COL27A1-201ENST00000356083 TRIM15Q9C019 465 aa18.51■□□□□ 0.55
COL27A1-201ENST00000356083 PALMDQ9NP74 551 aa18.51■□□□□ 0.55
COL27A1-201ENST00000356083 GOLGA8KD6RF30 607 aa18.51■□□□□ 0.55
COL27A1-201ENST00000356083 GUCA1CO95843 209 aa18.51■□□□□ 0.55
COL27A1-201ENST00000356083 RASGRP4Q8TDF6 673 aa18.51■□□□□ 0.55
COL27A1-201ENST00000356083 CNOT6LQ96LI5 555 aaKnown RBP18.51■□□□□ 0.55
COL27A1-201ENST00000356083 SERPINI1Q99574 410 aa18.51■□□□□ 0.55
COL27A1-201ENST00000356083 TRIM45Q9H8W5 580 aaPredicted RBP18.51■□□□□ 0.55
COL27A1-201ENST00000356083 SPZ1Q9BXG8 430 aa18.51■□□□□ 0.55
COL27A1-201ENST00000356083 SNX14Q9Y5W7 946 aa18.51■□□□□ 0.55
COL27A1-201ENST00000356083 K7ERI5 159 aa18.51■□□□□ 0.55
COL27A1-201ENST00000356083 GINM1Q9NU53 330 aa18.51■□□□□ 0.55
COL27A1-201ENST00000356083 IREB2P48200 963 aaKnown RBP18.51■□□□□ 0.55
COL27A1-201ENST00000356083 SMYD4Q8IYR2 804 aaPredicted RBP18.51■□□□□ 0.55
COL27A1-201ENST00000356083 ARHGEF9O43307 516 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 TAC1P20366 129 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 PSMA2P25787 234 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 CYP27A1Q02318 531 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 EPB41L5Q9HCM4 733 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 EXOC1LA0A1B0GW35 172 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 HSPA4LO95757 839 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 SKIP12755 728 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 CARSP49589 748 aaKnown RBP18.5■□□□□ 0.55
COL27A1-201ENST00000356083 CATSPER4Q7RTX7 472 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 SLC9A1P19634 815 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 ASPSCR1Q9BZE9 553 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 DCTN3O75935 186 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 TAF1BQ53T94 588 aaPredicted RBP18.5■□□□□ 0.55
COL27A1-201ENST00000356083 FAM117BQ6P1L5 589 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 KBTBD3Q8NAB2 608 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 AGR3Q8TD06 166 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 MED4Q9NPJ6 270 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 PCDHA5Q9Y5H7 936 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 CCDC195A0A1B0GUA6 201 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 DMC1Q14565 340 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 TAS2R42Q7RTR8 314 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 ATXN7L3BQ96GX2 97 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 JPH2Q9BR39 696 aaPredicted RBP18.5■□□□□ 0.55
COL27A1-201ENST00000356083 DIAPH2O60879 1101 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 SLC7A5Q01650 507 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 AP1B1Q10567 949 aa18.5■□□□□ 0.55
COL27A1-201ENST00000356083 TBL3Q12788 808 aaKnown RBP18.49■□□□□ 0.55
COL27A1-201ENST00000356083 SLC27A3Q5K4L6 730 aa18.49■□□□□ 0.55
COL27A1-201ENST00000356083 GRAMD4Q6IC98 578 aa18.49■□□□□ 0.55
COL27A1-201ENST00000356083 C1orf131Q8NDD1 294 aaKnown RBP18.49■□□□□ 0.55
COL27A1-201ENST00000356083 PACSIN2Q9UNF0 486 aaPredicted RBP18.49■□□□□ 0.55
COL27A1-201ENST00000356083 ERBB3P21860 1342 aa18.49■□□□□ 0.55
COL27A1-201ENST00000356083 ACSL3O95573 720 aa18.49■□□□□ 0.55
COL27A1-201ENST00000356083 BBS9Q3SYG4 887 aa18.49■□□□□ 0.55
COL27A1-201ENST00000356083 SFI1A8K8P3 1242 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms