RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 DACH1Q9UI36 760 aa10.72□□□□□ -0.69
NPHP1-202ENST00000355301 DDX41Q9UJV9 622 aaKnown RBP10.72□□□□□ -0.69
NPHP1-202ENST00000355301 CYP11B2P19099 503 aa10.72□□□□□ -0.69
NPHP1-202ENST00000355301 ARSHQ5FYA8 562 aa10.72□□□□□ -0.69
NPHP1-202ENST00000355301 UNC13DQ70J99 1090 aa10.72□□□□□ -0.69
NPHP1-202ENST00000355301 CYFIP1Q7L576 1253 aa10.72□□□□□ -0.69
NPHP1-202ENST00000355301 EEPD1Q7L9B9 569 aa10.72□□□□□ -0.69
NPHP1-202ENST00000355301 DHX40Q8IX18 779 aaKnown RBP10.72□□□□□ -0.69
NPHP1-202ENST00000355301 C4orf19Q8IY42 314 aa10.72□□□□□ -0.69
NPHP1-202ENST00000355301 MAML3Q96JK9 1138 aa10.72□□□□□ -0.69
NPHP1-202ENST00000355301 GTPBP4Q9BZE4 634 aaKnown RBP10.72□□□□□ -0.69
NPHP1-202ENST00000355301 SLC5A4Q9NY91 659 aa10.72□□□□□ -0.69
NPHP1-202ENST00000355301 WDR81Q562E7 1941 aa10.71□□□□□ -0.69
NPHP1-202ENST00000355301 IKBKBO14920 756 aa10.71□□□□□ -0.69
NPHP1-202ENST00000355301 AOC2O75106 756 aa10.71□□□□□ -0.69
NPHP1-202ENST00000355301 FARP2O94887 1054 aaPredicted RBP10.71□□□□□ -0.69
NPHP1-202ENST00000355301 ATG7O95352 703 aa10.71□□□□□ -0.69
NPHP1-202ENST00000355301 SSBP05455 408 aaKnown RBP eCLIP10.71□□□□□ -0.69
NPHP1-202ENST00000355301 HOXC6P09630 235 aa10.71□□□□□ -0.69
NPHP1-202ENST00000355301 DEKP35659 375 aaKnown RBP10.71□□□□□ -0.69
NPHP1-202ENST00000355301 ACTR2P61160 394 aa10.71□□□□□ -0.69
NPHP1-202ENST00000355301 PSMC5P62195 406 aa10.71□□□□□ -0.69
NPHP1-202ENST00000355301 EHHADHQ08426 723 aa10.71□□□□□ -0.69
NPHP1-202ENST00000355301 CCDC62Q6P9F0 684 aa10.71□□□□□ -0.69
NPHP1-202ENST00000355301 ABHD15Q6UXT9 468 aa10.71□□□□□ -0.69
NPHP1-202ENST00000355301 DYMQ7RTS9 669 aa10.71□□□□□ -0.69
NPHP1-202ENST00000355301 GPBP1Q86WP2 473 aa10.71□□□□□ -0.69
NPHP1-202ENST00000355301 FBXO16Q8IX29 292 aaPredicted RBP10.71□□□□□ -0.69
NPHP1-202ENST00000355301 MSL3Q8N5Y2 521 aaKnown RBP10.71□□□□□ -0.69
NPHP1-202ENST00000355301 PIGOQ8TEQ8 1089 aa10.71□□□□□ -0.69
NPHP1-202ENST00000355301 SCFD2Q8WU76 684 aa10.71□□□□□ -0.69
NPHP1-202ENST00000355301 CCDC47Q96A33 483 aaKnown RBP10.71□□□□□ -0.69
NPHP1-202ENST00000355301 VTA1Q9NP79 307 aa10.71□□□□□ -0.69
NPHP1-202ENST00000355301 SYNGAP1Q96PV0 1343 aa10.71□□□□□ -0.7
NPHP1-202ENST00000355301 FRMD3A2A2Y4 597 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 BECN2A8MW95 431 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 PPP1R3GB7ZBB8 358 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 ZBTB39O15060 712 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 ARIH2O95376 493 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 PSAPP07602 524 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 ERCC5P28715 1186 aaPredicted RBP10.7□□□□□ -0.7
NPHP1-202ENST00000355301 MAP2K5Q13163 448 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 LY6KQ17RY6 165 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 METTL7BQ6UX53 244 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 USP6NLQ92738 828 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 TINF2Q9BSI4 451 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 KATNBL1Q9H079 304 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 EXOC1Q9NV70 894 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.7□□□□□ -0.7
NPHP1-202ENST00000355301 KCND2Q9NZV8 630 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 DBR1Q9UK59 544 aaKnown RBP10.7□□□□□ -0.7
NPHP1-202ENST00000355301 RBM47A0AV96 593 aaKnown RBP10.7□□□□□ -0.7
NPHP1-202ENST00000355301 DKC1O60832 514 aaKnown RBP eCLIP10.7□□□□□ -0.7
NPHP1-202ENST00000355301 GGPS1O95749 300 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 SNAI1O95863 264 aaPredicted RBP10.7□□□□□ -0.7
NPHP1-202ENST00000355301 CD44P16070 742 aaKnown RBP10.7□□□□□ -0.7
NPHP1-202ENST00000355301 YWHABP31946 246 aaKnown RBP10.7□□□□□ -0.7
NPHP1-202ENST00000355301 PSMD2Q13200 908 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 TTLL4Q14679 1199 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 NCAPHQ15003 741 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 UGCGQ16739 394 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 COBLL1Q53SF7 1204 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 CELF3Q5SZQ8 465 aaKnown RBP10.7□□□□□ -0.7
NPHP1-202ENST00000355301 RINT1Q6NUQ1 792 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 TAPT1Q6NXT6 567 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 MIS18BP1Q6P0N0 1132 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 C1orf186Q6ZWK4 172 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 SMYD4Q8IYR2 804 aaPredicted RBP10.7□□□□□ -0.7
NPHP1-202ENST00000355301 DOCK3Q8IZD9 2030 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 AOPEPQ8N6M6 819 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 NPLOC4Q8TAT6 608 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 SOCS4Q8WXH5 440 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 ATP6V0A1Q93050 837 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 TELO2Q9Y4R8 837 aa10.7□□□□□ -0.7
NPHP1-202ENST00000355301 IGKV6D-21A0A0A0MT36 114 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 SMTNL1A8MU46 457 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 GOLGA6L19H0YKK7 550 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 KRT18P05783 430 aaKnown RBP10.69□□□□□ -0.7
NPHP1-202ENST00000355301 SUPT20HL2P0C7V6 817 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 TXNP10599 105 aaKnown RBP10.69□□□□□ -0.7
NPHP1-202ENST00000355301 IDEP14735 1019 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 MYL5Q02045 173 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 SP4Q02446 784 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 STK4Q13043 487 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 IRF5Q13568 498 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 GIT2Q14161 759 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 SWSAP1Q6NVH7 229 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 CCDC60Q8IWA6 550 aaPredicted RBP10.69□□□□□ -0.7
NPHP1-202ENST00000355301 CCDC65Q8IXS2 484 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 ENOX1Q8TC92 643 aaKnown RBP10.69□□□□□ -0.7
NPHP1-202ENST00000355301 REEP2Q9BRK0 252 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 RUSC1Q9BVN2 902 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 CFHR5Q9BXR6 569 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 ABHD16BQ9H3Z7 469 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 PDGFCQ9NRA1 345 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 PANK4Q9NVE7 773 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 GABBR1Q9UBS5 961 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 GJD2Q9UKL4 321 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 GDAQ9Y2T3 454 aa10.69□□□□□ -0.7
NPHP1-202ENST00000355301 IGSF9BQ9UPX0 1349 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms