RNA–Protein interactions for RNA: ENST00000353546.7

ARFGAP1-201, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARFGAP1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-201ENST00000353546 TRIM4Q9C037 500 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 SH2D4AQ9H788 454 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 BIN2Q9UBW5 565 aaPredicted RBP18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 NHSL1Q5SYE7 1610 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 KLRC4O43908 158 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 KRT16P08779 473 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 CALML3P27482 149 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 CTNNA1P35221 906 aaKnown RBP18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 DNA2P51530 1060 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 TUBGCP2Q9BSJ2 902 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 TLR10Q9BXR5 811 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 ZNHIT6Q9NWK9 470 aaKnown RBP18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 ADAM22Q9P0K1 906 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 NPTXRO95502 500 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 SRGNP10124 158 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 TPP2P29144 1249 aaPredicted RBP18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 UBA7P41226 1012 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 LRIG3Q6UXM1 1119 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 TRPM8Q7Z2W7 1104 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 MYLK4Q86YV6 388 aaPredicted RBP18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 CSGALNACT2Q8N6G5 542 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 ANKS4BQ8N8V4 417 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 PCMTD1Q96MG8 357 aaPredicted RBP18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 XPO6Q96QU8 1125 aaKnown RBP18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 TMEM60Q9H2L4 133 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 EXOC1Q9NV70 894 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 SALL4Q9UJQ4 1053 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 STK38LQ9Y2H1 464 aa18.42■□□□□ 0.54
ARFGAP1-201ENST00000353546 CTNND1O60716 968 aaKnown RBP18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 UBOX5O94941 541 aa18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 NTSR2O95665 410 aa18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 TTI2Q6NXR4 508 aa18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 GPIHBP1Q8IV16 184 aa18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 ANKRD13CQ8N6S4 541 aa18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 CELF1Q92879 486 aaKnown RBP18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 ZNF317Q96PQ6 595 aaPredicted RBP18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 TSPY2A6NKD2 308 aa18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 RARAP10276 462 aa18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 ALDH3A1P30838 453 aa18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 CCNG1P51959 295 aa18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 POLE2P56282 527 aa18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 BIRC3Q13489 604 aa18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 HLTFQ14527 1009 aaKnown RBP eCLIP18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 PARP10Q53GL7 1025 aa18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 CAVIN4Q5BKX8 364 aa18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 ERMARDQ5T6L9 678 aa18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 RNF220Q5VTB9 566 aa18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 TEX9Q8N6V9 391 aa18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 GIMAP8Q8ND71 665 aaPredicted RBP18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 OCEL1Q9H607 264 aa18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 ANKIB1Q9P2G1 1089 aa18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 PCDHA4Q9UN74 947 aa18.41■□□□□ 0.54
ARFGAP1-201ENST00000353546 CACNA1SQ13698 1873 aa18.4■□□□□ 0.54
ARFGAP1-201ENST00000353546 MYH7BA7E2Y1 1941 aa18.4■□□□□ 0.54
ARFGAP1-201ENST00000353546 CCDC194A0A1B0GVG4 234 aa18.4■□□□□ 0.54
ARFGAP1-201ENST00000353546 ABCD1P33897 745 aa18.4■□□□□ 0.54
ARFGAP1-201ENST00000353546 RNASE9P60153 205 aaKnown RBP18.4■□□□□ 0.54
ARFGAP1-201ENST00000353546 TTYH3Q9C0H2 523 aa18.4■□□□□ 0.54
ARFGAP1-201ENST00000353546 DCP1AQ9NPI6 582 aaPredicted RBP18.4■□□□□ 0.54
ARFGAP1-201ENST00000353546 AFF2P51816 1311 aa18.4■□□□□ 0.54
ARFGAP1-201ENST00000353546 LOC102724428A0A0B4J2F2 783 aa18.4■□□□□ 0.54
ARFGAP1-201ENST00000353546 NUTM2BA6NNL0 878 aaPredicted RBP18.4■□□□□ 0.54
ARFGAP1-201ENST00000353546 NUTM2EB1AL46 878 aaPredicted RBP18.4■□□□□ 0.54
ARFGAP1-201ENST00000353546 RHOBTB3O94955 611 aa18.4■□□□□ 0.54
ARFGAP1-201ENST00000353546 SETSIPP0DME0 302 aa18.4■□□□□ 0.54
ARFGAP1-201ENST00000353546 CNGA1P29973 690 aa18.4■□□□□ 0.54
ARFGAP1-201ENST00000353546 SIK1P57059 783 aa18.4■□□□□ 0.54
ARFGAP1-201ENST00000353546 DUSP9Q99956 384 aaKnown RBP18.4■□□□□ 0.54
ARFGAP1-201ENST00000353546 IFIH1Q9BYX4 1025 aaKnown RBP18.4■□□□□ 0.54
ARFGAP1-201ENST00000353546 MTFR1LQ9H019 292 aa18.4■□□□□ 0.54
ARFGAP1-201ENST00000353546 SUDS3Q9H7L9 328 aaPredicted RBP18.4■□□□□ 0.54
ARFGAP1-201ENST00000353546 ZMYND8Q9ULU4 1186 aaPredicted RBP18.4■□□□□ 0.54
ARFGAP1-201ENST00000353546 MYL1P05976 194 aa18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 ECHS1P30084 290 aa18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 TYW1BQ6NUM6 668 aa18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 LRRC15Q8TF66 581 aa18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 ELAC2Q9BQ52 826 aaKnown RBP18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 MMTAG2Q9BU76 263 aaKnown RBP18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 FAM129AQ9BZQ8 928 aa18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 GOPCQ9HD26 462 aa18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 KBTBD4Q9NVX7 518 aa18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 RAD51CO43502 376 aa18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 PRDX5P30044 214 aa18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 GNAQP50148 359 aa18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 SPA17Q15506 151 aa18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 IFI16Q16666 785 aaKnown RBP18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 INF2Q27J81 1249 aa18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 CFAP221Q4G0U5 840 aa18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 RUFY4Q6ZNE9 571 aa18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 PIGWQ7Z7B1 504 aa18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 STAG2Q8N3U4 1231 aa18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 FAM84BQ96KN1 310 aaPredicted RBP18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 RPS6KC1Q96S38 1066 aa18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 CPVLQ9H3G5 476 aa18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 MYH1P12882 1939 aa18.39■□□□□ 0.53
ARFGAP1-201ENST00000353546 ZBED6P86452 979 aa18.38■□□□□ 0.53
ARFGAP1-201ENST00000353546 DDX42Q86XP3 938 aaKnown RBP eCLIP18.38■□□□□ 0.536e-7■■□□□ 13
ARFGAP1-201ENST00000353546 SYCP3Q8IZU3 236 aa18.38■□□□□ 0.53
ARFGAP1-201ENST00000353546 NSUN4Q96CB9 384 aaKnown RBP18.38■□□□□ 0.53
ARFGAP1-201ENST00000353546 MMADHCQ9H3L0 296 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms