RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 AARSP49588 968 aaKnown RBP eCLIP18.29■□□□□ 0.523e-6■■■□□ 18.1
PDAP1-201ENST00000350498 ADAM9Q13443 819 aa18.29■□□□□ 0.52
PDAP1-201ENST00000350498 GIT2Q14161 759 aa18.29■□□□□ 0.52
PDAP1-201ENST00000350498 TDRD12Q587J7 1177 aaKnown RBP18.29■□□□□ 0.52
PDAP1-201ENST00000350498 SYDE2Q5VT97 1194 aa18.29■□□□□ 0.52
PDAP1-201ENST00000350498 SND1Q7KZF4 910 aaKnown RBP eCLIP18.29■□□□□ 0.52
PDAP1-201ENST00000350498 SFR1Q86XK3 245 aa18.29■□□□□ 0.52
PDAP1-201ENST00000350498 SH2D4AQ9H788 454 aa18.29■□□□□ 0.52
PDAP1-201ENST00000350498 ZBTB12Q9Y330 459 aaPredicted RBP18.29■□□□□ 0.52
PDAP1-201ENST00000350498 USP11P51784 963 aa18.28■□□□□ 0.52
PDAP1-201ENST00000350498 PSMD2Q13200 908 aa18.28■□□□□ 0.52
PDAP1-201ENST00000350498 DNAJC21Q5F1R6 531 aaKnown RBP18.28■□□□□ 0.52
PDAP1-201ENST00000350498 CCDC174Q6PII3 467 aa18.28■□□□□ 0.52
PDAP1-201ENST00000350498 TMEM179Q6ZVK1 233 aa18.28■□□□□ 0.52
PDAP1-201ENST00000350498 RUSC1Q9BVN2 902 aa18.28■□□□□ 0.52
PDAP1-201ENST00000350498 PRR12Q9ULL5 1215 aa18.28■□□□□ 0.52
PDAP1-201ENST00000350498 RAD17O75943 681 aa18.28■□□□□ 0.52
PDAP1-201ENST00000350498 CKAP4Q07065 602 aaKnown RBP18.28■□□□□ 0.52
PDAP1-201ENST00000350498 CTTNQ14247 550 aaKnown RBP18.28■□□□□ 0.52
PDAP1-201ENST00000350498 PTPROQ16827 1216 aa18.28■□□□□ 0.52
PDAP1-201ENST00000350498 ASTE1Q2TB18 679 aaPredicted RBP18.28■□□□□ 0.52
PDAP1-201ENST00000350498 FAM83BQ5T0W9 1011 aa18.28■□□□□ 0.52
PDAP1-201ENST00000350498 PACSIN1Q9BY11 444 aa18.28■□□□□ 0.52
PDAP1-201ENST00000350498 NT5C3AQ9H0P0 336 aa18.28■□□□□ 0.52
PDAP1-201ENST00000350498 BHMT2Q9H2M3 363 aa18.28■□□□□ 0.52
PDAP1-201ENST00000350498 BMP2KQ9NSY1 1161 aaPredicted RBP18.28■□□□□ 0.52
PDAP1-201ENST00000350498 CYP3A7-CYP3A51PA0A087WV96 503 aa18.27■□□□□ 0.52
PDAP1-201ENST00000350498 ZSCAN5CA6NGD5 496 aaPredicted RBP18.27■□□□□ 0.52
PDAP1-201ENST00000350498 BMP3P12645 472 aa18.27■□□□□ 0.52
PDAP1-201ENST00000350498 CYP3A7P24462 503 aa18.27■□□□□ 0.52
PDAP1-201ENST00000350498 MAGEA1P43355 309 aa18.27■□□□□ 0.52
PDAP1-201ENST00000350498 MIGA2Q7L4E1 593 aa18.27■□□□□ 0.52
PDAP1-201ENST00000350498 CCDC65Q8IXS2 484 aa18.27■□□□□ 0.52
PDAP1-201ENST00000350498 EHBP1Q8NDI1 1231 aa18.27■□□□□ 0.52
PDAP1-201ENST00000350498 SPATA4Q8NEY3 305 aa18.27■□□□□ 0.52
PDAP1-201ENST00000350498 GLIS2Q9BZE0 524 aaPredicted RBP18.27■□□□□ 0.52
PDAP1-201ENST00000350498 SPDYE3A6NKU9 549 aa18.27■□□□□ 0.52
PDAP1-201ENST00000350498 CLIC2O15247 247 aa18.27■□□□□ 0.52
PDAP1-201ENST00000350498 CFBP00751 764 aa18.27■□□□□ 0.52
PDAP1-201ENST00000350498 SLC9A1P19634 815 aa18.27■□□□□ 0.52
PDAP1-201ENST00000350498 CASP4P49662 377 aa18.27■□□□□ 0.52
PDAP1-201ENST00000350498 CDK17Q00537 523 aa18.27■□□□□ 0.52
PDAP1-201ENST00000350498 TRIM59Q8IWR1 403 aa18.27■□□□□ 0.52
PDAP1-201ENST00000350498 MBOAT7Q96N66 472 aa18.27■□□□□ 0.52
PDAP1-201ENST00000350498 OSBPL9Q96SU4 736 aa18.27■□□□□ 0.52
PDAP1-201ENST00000350498 RASSF4Q9H2L5 321 aa18.27■□□□□ 0.52
PDAP1-201ENST00000350498 PACSIN2Q9UNF0 486 aaPredicted RBP18.27■□□□□ 0.52
PDAP1-201ENST00000350498 TARSL2A2RTX5 802 aaKnown RBP18.26■□□□□ 0.51
PDAP1-201ENST00000350498 RNASE9P60153 205 aaKnown RBP18.26■□□□□ 0.51
PDAP1-201ENST00000350498 PPARDQ03181 441 aa18.26■□□□□ 0.51
PDAP1-201ENST00000350498 RBM26Q5T8P6 1007 aaKnown RBP18.26■□□□□ 0.51
PDAP1-201ENST00000350498 ZNF662Q6ZS27 426 aa18.26■□□□□ 0.51
PDAP1-201ENST00000350498 FAM133AQ8N9E0 248 aa18.26■□□□□ 0.51
PDAP1-201ENST00000350498 TSEN2Q8NCE0 465 aaKnown RBP18.26■□□□□ 0.51
PDAP1-201ENST00000350498 ACBD3Q9H3P7 528 aa18.26■□□□□ 0.51
PDAP1-201ENST00000350498 VIPAS39Q9H9C1 493 aa18.26■□□□□ 0.51
PDAP1-201ENST00000350498 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.26■□□□□ 0.51
PDAP1-201ENST00000350498 KDM3AQ9Y4C1 1321 aa18.26■□□□□ 0.51
PDAP1-201ENST00000350498 ESYT3A0FGR9 886 aa18.26■□□□□ 0.51
PDAP1-201ENST00000350498 ANO9A1A5B4 782 aa18.26■□□□□ 0.51
PDAP1-201ENST00000350498 TUBBP07437 444 aa18.26■□□□□ 0.51
PDAP1-201ENST00000350498 NR2F2P24468 414 aa18.26■□□□□ 0.51
PDAP1-201ENST00000350498 MAP9Q49MG5 647 aa18.26■□□□□ 0.51
PDAP1-201ENST00000350498 AENQ8WTP8 325 aaKnown RBP18.26■□□□□ 0.51
PDAP1-201ENST00000350498 WDR18Q9BV38 432 aa18.26■□□□□ 0.51
PDAP1-201ENST00000350498 JRKLQ9Y4A0 524 aa18.26■□□□□ 0.51
PDAP1-201ENST00000350498 KCNH2Q12809 1159 aa18.25■□□□□ 0.51
PDAP1-201ENST00000350498 RAPGEF1Q13905 1077 aa18.25■□□□□ 0.51
PDAP1-201ENST00000350498 C7orf43Q8WVR3 580 aa18.25■□□□□ 0.51
PDAP1-201ENST00000350498 GOLPH3Q9H4A6 298 aa18.25■□□□□ 0.51
PDAP1-201ENST00000350498 FBXO28Q9NVF7 368 aa18.25■□□□□ 0.51
PDAP1-201ENST00000350498 SERPINA10Q9UK55 444 aa18.25■□□□□ 0.51
PDAP1-201ENST00000350498 AJAP1Q9UKB5 411 aaPredicted RBP18.25■□□□□ 0.51
PDAP1-201ENST00000350498 VAV3Q9UKW4 847 aa18.25■□□□□ 0.51
PDAP1-201ENST00000350498 ZNF646O15015 1829 aaPredicted RBP18.25■□□□□ 0.51
PDAP1-201ENST00000350498 GOLGA6BA6NDN3 693 aa18.25■□□□□ 0.51
PDAP1-201ENST00000350498 PPIP5K2O43314 1243 aa18.25■□□□□ 0.51
PDAP1-201ENST00000350498 FGFR1OPO95684 399 aaKnown RBP18.25■□□□□ 0.51
PDAP1-201ENST00000350498 NAP1L1P55209 391 aaKnown RBP18.25■□□□□ 0.51
PDAP1-201ENST00000350498 GJB7Q6PEY0 223 aa18.25■□□□□ 0.51
PDAP1-201ENST00000350498 TRIM58Q8NG06 486 aa18.25■□□□□ 0.51
PDAP1-201ENST00000350498 LRRC27Q9C0I9 530 aa18.25■□□□□ 0.51
PDAP1-201ENST00000350498 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.25■□□□□ 0.51
PDAP1-201ENST00000350498 RBM12Q9NTZ6 932 aaKnown RBP18.25■□□□□ 0.51
PDAP1-201ENST00000350498 A0A087X0T9 212 aa18.24■□□□□ 0.51
PDAP1-201ENST00000350498 TACC1O75410 805 aa18.24■□□□□ 0.51
PDAP1-201ENST00000350498 FAM228BP0C875 321 aa18.24■□□□□ 0.51
PDAP1-201ENST00000350498 ZNF76P36508 570 aa18.24■□□□□ 0.51
PDAP1-201ENST00000350498 SREBF1P36956 1147 aa18.24■□□□□ 0.51
PDAP1-201ENST00000350498 DGKZQ13574 1117 aa18.24■□□□□ 0.51
PDAP1-201ENST00000350498 ZC2HC1CQ53FD0 456 aaPredicted RBP18.24■□□□□ 0.51
PDAP1-201ENST00000350498 GOLGA6L1Q8N7Z2 621 aa18.24■□□□□ 0.51
PDAP1-201ENST00000350498 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.24■□□□□ 0.51
PDAP1-201ENST00000350498 ADAMTS1Q9UHI8 967 aa18.24■□□□□ 0.51
PDAP1-201ENST00000350498 PLSCR1O15162 318 aa18.24■□□□□ 0.51
PDAP1-201ENST00000350498 AKAP3O75969 853 aa18.24■□□□□ 0.51
PDAP1-201ENST00000350498 IVLP07476 585 aa18.24■□□□□ 0.51
PDAP1-201ENST00000350498 EIF2AK1Q9BQI3 630 aaKnown RBP18.24■□□□□ 0.51
PDAP1-201ENST00000350498 TLR10Q9BXR5 811 aa18.24■□□□□ 0.51
PDAP1-201ENST00000350498 WRAP73Q9P2S5 460 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms