RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ZNF131P52739 623 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 CYP4A11Q02928 519 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 TBC1D8BQ0IIM8 1120 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 ITGB3BPQ13352 177 aaPredicted RBP7.67□□□□□ -1.18
TRIM55-203ENST00000350034 CTTNQ14247 550 aaKnown RBP7.67□□□□□ -1.18
TRIM55-203ENST00000350034 TMEM132BQ14DG7 1078 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 MAN2A1Q16706 1144 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 VWA3BQ502W6 1294 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 TRIM65Q6PJ69 517 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 RAD9BQ6WBX8 426 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 RNF207Q6ZRF8 634 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 SFR1Q86XK3 245 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 TMTC1Q8IUR5 882 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 IQCDQ96DY2 449 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 L3MBTL3Q96JM7 780 aaPredicted RBP7.67□□□□□ -1.18
TRIM55-203ENST00000350034 ZFP91Q96JP5 570 aaPredicted RBP7.67□□□□□ -1.18
TRIM55-203ENST00000350034 NACC1Q96RE7 527 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 DNAJC7Q99615 494 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 TSG101Q99816 390 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 NOC4LQ9BVI4 516 aaKnown RBP7.67□□□□□ -1.18
TRIM55-203ENST00000350034 NUP58Q9BVL2 599 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 BHMT2Q9H2M3 363 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 PXMP2Q9NR77 195 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 OLFML3Q9NRN5 406 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 RNF146Q9NTX7 359 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 ABHD10Q9NUJ1 306 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 TMOD4Q9NZQ9 345 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 KCND2Q9NZV8 630 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 RNF181Q9P0P0 153 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 WRAP73Q9P2S5 460 aaPredicted RBP7.67□□□□□ -1.18
TRIM55-203ENST00000350034 FZD1Q9UP38 647 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 SIK3Q9Y2K2 1263 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 PPP2R2CQ9Y2T4 447 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 RLFQ13129 1914 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 UQCRHLA0A096LP55 91 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 A0A1W2PQJ5 194 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 TTC26A0AVF1 554 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 SOWAHDA6NJG2 315 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 RSPH10B2B2RC85 870 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 PDXKO00764 312 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 RIOK3O14730 519 aaKnown RBP7.66□□□□□ -1.18
TRIM55-203ENST00000350034 EIF3DO15371 548 aaKnown RBP eCLIP7.66□□□□□ -1.18
TRIM55-203ENST00000350034 CTIFO43310 598 aaKnown RBP7.66□□□□□ -1.18
TRIM55-203ENST00000350034 GNA14O95837 355 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 KRT18P05783 430 aaKnown RBP7.66□□□□□ -1.18
TRIM55-203ENST00000350034 UQCRHP07919 91 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 RSPH10BP0C881 870 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 PRKCSHP14314 528 aaPredicted RBP7.66□□□□□ -1.18
TRIM55-203ENST00000350034 GUCY2CP25092 1073 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 KRT9P35527 623 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 MTIF2P46199 727 aaKnown RBP7.66□□□□□ -1.18
TRIM55-203ENST00000350034 CASP5P51878 434 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 ETF1P62495 437 aaKnown RBP7.66□□□□□ -1.18
TRIM55-203ENST00000350034 ERVK-24P63145 666 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 CDK17Q00537 523 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 MAPK7Q13164 816 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 BAATQ14032 418 aaPredicted RBP7.66□□□□□ -1.18
TRIM55-203ENST00000350034 VGLL4Q14135 290 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 MTF1Q14872 753 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 SYCP1Q15431 976 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 MEA1Q16626 185 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 NFIL3Q16649 462 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 C9orf131Q5VYM1 1079 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 TOGARAM2Q6ZUX3 1019 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 VSIG10LQ86VR7 867 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 TPH2Q8IWU9 490 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 OR8K1Q8NGG5 319 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 CPLX3Q8WVH0 158 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 DCPSQ96C86 337 aaKnown RBP7.66□□□□□ -1.18
TRIM55-203ENST00000350034 GPRASP2Q96D09 838 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 INPP4AQ96PE3 977 aaPredicted RBP7.66□□□□□ -1.18
TRIM55-203ENST00000350034 FIZ1Q96SL8 496 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 RMDN3Q96TC7 470 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 SENP7Q9BQF6 1050 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 TEX13BQ9BXU2 312 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 NDST4Q9H3R1 872 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 TBC1D22BQ9NU19 505 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 HOXC10Q9NYD6 342 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 TBC1D7Q9P0N9 293 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 SEL1LQ9UBV2 794 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 DBR1Q9UK59 544 aaKnown RBP7.66□□□□□ -1.18
TRIM55-203ENST00000350034 ODF2LQ9ULJ1 636 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 CTDP1Q9Y5B0 961 aaPredicted RBP7.66□□□□□ -1.18
TRIM55-203ENST00000350034 COL4A3BPQ9Y5P4 624 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 ADGRG1Q9Y653 693 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 PAPPA2Q9BXP8 1791 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 PARP14Q460N5 1801 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 PHIPQ8WWQ0 1821 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 SBF1O95248 1867 aa7.66□□□□□ -1.18
TRIM55-203ENST00000350034 ADM5C9JUS6 153 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 DYNC1I1O14576 645 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 IRF6O14896 467 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 ZBTB39O15060 712 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 MAFGO15525 162 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 CHMP2AO43633 222 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 TBCAO75347 108 aaKnown RBP7.65□□□□□ -1.18
TRIM55-203ENST00000350034 UBE4BO95155 1302 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 P4HBP07237 508 aaKnown RBP7.65□□□□□ -1.18
TRIM55-203ENST00000350034 NR3C2P08235 984 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 EIF2AK2P19525 551 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms