RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 HDAC9Q9UKV0 1011 aa16.37■□□□□ 0.21
COG3-201ENST00000349995 ZNF804BA4D1E1 1349 aa16.36■□□□□ 0.21
COG3-201ENST00000349995 TCP11X1B4DZS4 312 aa16.36■□□□□ 0.21
COG3-201ENST00000349995 FSBPO95073 299 aa16.36■□□□□ 0.21
COG3-201ENST00000349995 STOX1Q6ZVD7 989 aa16.36■□□□□ 0.21
COG3-201ENST00000349995 XPO6Q96QU8 1125 aaKnown RBP16.36■□□□□ 0.21
COG3-201ENST00000349995 DMGDHQ9UI17 866 aaKnown RBP16.36■□□□□ 0.21
COG3-201ENST00000349995 CHN1P15882 459 aa16.36■□□□□ 0.21
COG3-201ENST00000349995 ESRRGP62508 458 aa16.36■□□□□ 0.21
COG3-201ENST00000349995 CDR2Q01850 454 aa16.36■□□□□ 0.21
COG3-201ENST00000349995 FMR1Q06787 632 aaKnown RBP eCLIP16.36■□□□□ 0.219e-6■■■■□ 20.6
COG3-201ENST00000349995 HERC4Q5GLZ8 1057 aaPredicted RBP16.36■□□□□ 0.21
COG3-201ENST00000349995 MAP3K21Q5TCX8 1036 aa16.36■□□□□ 0.21
COG3-201ENST00000349995 SREK1Q8WXA9 508 aaKnown RBP16.36■□□□□ 0.21
COG3-201ENST00000349995 DCTN4Q9UJW0 460 aa16.36■□□□□ 0.21
COG3-201ENST00000349995 SNX12Q9UMY4 172 aa16.36■□□□□ 0.21
COG3-201ENST00000349995 MMP14P50281 582 aa16.36■□□□□ 0.21
COG3-201ENST00000349995 TCP10Q12799 353 aa16.36■□□□□ 0.21
COG3-201ENST00000349995 STRBPQ96SI9 672 aaKnown RBP16.36■□□□□ 0.21
COG3-201ENST00000349995 MCM8Q9UJA3 840 aa16.36■□□□□ 0.21
COG3-201ENST00000349995 LGR5O75473 907 aa16.35■□□□□ 0.21
COG3-201ENST00000349995 ZFXP17010 805 aaPredicted RBP16.35■□□□□ 0.21
COG3-201ENST00000349995 CA4P22748 312 aa16.35■□□□□ 0.21
COG3-201ENST00000349995 ARHGAP44Q17R89 818 aa16.35■□□□□ 0.21
COG3-201ENST00000349995 CTAGE3PQ8IX95 158 aa16.35■□□□□ 0.21
COG3-201ENST00000349995 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.35■□□□□ 0.21
COG3-201ENST00000349995 FAM133AQ8N9E0 248 aa16.35■□□□□ 0.21
COG3-201ENST00000349995 KAT2BQ92831 832 aa16.35■□□□□ 0.21
COG3-201ENST00000349995 DDX20Q9UHI6 824 aaKnown RBP16.35■□□□□ 0.21
COG3-201ENST00000349995 GDAQ9Y2T3 454 aa16.35■□□□□ 0.21
COG3-201ENST00000349995 GOLGA8HP0CJ92 632 aa16.35■□□□□ 0.21
COG3-201ENST00000349995 GNA11P29992 359 aa16.35■□□□□ 0.21
COG3-201ENST00000349995 SRRM1Q8IYB3 904 aaKnown RBP16.35■□□□□ 0.21
COG3-201ENST00000349995 USP6NLQ92738 828 aa16.35■□□□□ 0.21
COG3-201ENST00000349995 SPZ1Q9BXG8 430 aa16.35■□□□□ 0.21
COG3-201ENST00000349995 FRMD4BQ9Y2L6 1034 aa16.35■□□□□ 0.21
COG3-201ENST00000349995 KIF20BQ96Q89 1820 aa16.35■□□□□ 0.21
COG3-201ENST00000349995 MED23Q9ULK4 1368 aa16.35■□□□□ 0.21
COG3-201ENST00000349995 DAPK3O43293 454 aa16.35■□□□□ 0.21
COG3-201ENST00000349995 RFX5P48382 616 aaPredicted RBP16.35■□□□□ 0.21
COG3-201ENST00000349995 EHD2Q9NZN4 543 aa16.35■□□□□ 0.21
COG3-201ENST00000349995 RAB21Q9UL25 225 aa16.35■□□□□ 0.21
COG3-201ENST00000349995 PCDHB6Q9Y5E3 794 aa16.35■□□□□ 0.21
COG3-201ENST00000349995 ATICP31939 592 aa16.34■□□□□ 0.21
COG3-201ENST00000349995 PLS1Q14651 629 aa16.34■□□□□ 0.21
COG3-201ENST00000349995 C16orf87Q6PH81 154 aa16.34■□□□□ 0.21
COG3-201ENST00000349995 TSNARE1Q96NA8 513 aa16.34■□□□□ 0.21
COG3-201ENST00000349995 PALMDQ9NP74 551 aa16.34■□□□□ 0.21
COG3-201ENST00000349995 PRR16Q569H4 304 aa16.34■□□□□ 0.21
COG3-201ENST00000349995 CABP7Q86V35 215 aa16.34■□□□□ 0.21
COG3-201ENST00000349995 MFN1Q8IWA4 741 aa16.34■□□□□ 0.21
COG3-201ENST00000349995 TAB3Q8N5C8 712 aaPredicted RBP16.34■□□□□ 0.21
COG3-201ENST00000349995 GPR101Q96P66 508 aaPredicted RBP16.34■□□□□ 0.21
COG3-201ENST00000349995 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.34■□□□□ 0.21
COG3-201ENST00000349995 TRIM49BA6NDI0 452 aa16.34■□□□□ 0.21
COG3-201ENST00000349995 SPAG7O75391 227 aa16.34■□□□□ 0.21
COG3-201ENST00000349995 RPS6KA5O75582 802 aa16.34■□□□□ 0.21
COG3-201ENST00000349995 DCTN3O75935 186 aa16.34■□□□□ 0.21
COG3-201ENST00000349995 RNASELQ05823 741 aaKnown RBP16.34■□□□□ 0.21
COG3-201ENST00000349995 TRIM28Q13263 835 aaKnown RBP16.34■□□□□ 0.21
COG3-201ENST00000349995 OGFOD1Q8N543 542 aa16.34■□□□□ 0.21
COG3-201ENST00000349995 FAM161BQ96MY7 647 aa16.34■□□□□ 0.21
COG3-201ENST00000349995 TGS1Q96RS0 853 aaKnown RBP16.34■□□□□ 0.21
COG3-201ENST00000349995 CUEDC2Q9H467 287 aa16.34■□□□□ 0.21
COG3-201ENST00000349995 RBM12Q9NTZ6 932 aaKnown RBP16.34■□□□□ 0.21
COG3-201ENST00000349995 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.34■□□□□ 0.21
COG3-201ENST00000349995 ATP5HO75947 161 aa16.33■□□□□ 0.21
COG3-201ENST00000349995 EZH2Q15910 746 aaKnown RBP16.33■□□□□ 0.21
COG3-201ENST00000349995 DPP8Q6V1X1 898 aaPredicted RBP16.33■□□□□ 0.21
COG3-201ENST00000349995 KDM7AQ6ZMT4 941 aa16.33■□□□□ 0.21
COG3-201ENST00000349995 TBC1D10CQ8IV04 446 aa16.33■□□□□ 0.21
COG3-201ENST00000349995 SYT2Q8N9I0 419 aaPredicted RBP16.33■□□□□ 0.21
COG3-201ENST00000349995 C3orf20Q8ND61 904 aa16.33■□□□□ 0.21
COG3-201ENST00000349995 PAGE5Q96GU1 130 aa16.33■□□□□ 0.21
COG3-201ENST00000349995 MRPL46Q9H2W6 279 aaKnown RBP16.33■□□□□ 0.21
COG3-201ENST00000349995 PASKQ96RG2 1323 aa16.33■□□□□ 0.21
COG3-201ENST00000349995 USP42Q9H9J4 1324 aaKnown RBP16.33■□□□□ 0.21
COG3-201ENST00000349995 A0A0G2JLW4 131 aa16.33■□□□□ 0.2
COG3-201ENST00000349995 OPLAHO14841 1288 aa16.33■□□□□ 0.2
COG3-201ENST00000349995 DR1Q01658 176 aa16.33■□□□□ 0.2
COG3-201ENST00000349995 RESP18Q5W5W9 173 aa16.33■□□□□ 0.2
COG3-201ENST00000349995 SLC17A8Q8NDX2 589 aa16.33■□□□□ 0.2
COG3-201ENST00000349995 TXNDC16Q9P2K2 825 aa16.33■□□□□ 0.2
COG3-201ENST00000349995 RWDD2AQ9UIY3 292 aa16.33■□□□□ 0.2
COG3-201ENST00000349995 USP15Q9Y4E8 981 aaPredicted RBP16.33■□□□□ 0.2
COG3-201ENST00000349995 PXDNQ92626 1479 aa16.33■□□□□ 0.2
COG3-201ENST00000349995 SART1O43290 800 aaKnown RBP16.33■□□□□ 0.2
COG3-201ENST00000349995 FGGP02679 453 aa16.33■□□□□ 0.2
COG3-201ENST00000349995 STAT1P42224 750 aa16.33■□□□□ 0.2
COG3-201ENST00000349995 KRT80Q6KB66 452 aa16.33■□□□□ 0.2
COG3-201ENST00000349995 SPATA21Q7Z572 469 aa16.33■□□□□ 0.2
COG3-201ENST00000349995 ZFP69BQ9UJL9 534 aa16.33■□□□□ 0.2
COG3-201ENST00000349995 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.33■□□□□ 0.2
COG3-201ENST00000349995 BRAFP15056 766 aa16.33■□□□□ 0.2
COG3-201ENST00000349995 RBM26Q5T8P6 1007 aaKnown RBP16.33■□□□□ 0.2
COG3-201ENST00000349995 SHC4Q6S5L8 630 aa16.33■□□□□ 0.2
COG3-201ENST00000349995 METTL16Q86W50 562 aaKnown RBP16.33■□□□□ 0.2
COG3-201ENST00000349995 DDX42Q86XP3 938 aaKnown RBP eCLIP16.33■□□□□ 0.2
COG3-201ENST00000349995 PNMA1Q8ND90 353 aa16.33■□□□□ 0.2
COG3-201ENST00000349995 CELF1Q92879 486 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms