RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 SUCLG2Q96I99 432 aa11.58□□□□□ -0.55
CAPN3-203ENST00000349748 ZNF333Q96JL9 665 aa11.58□□□□□ -0.55
CAPN3-203ENST00000349748 AGAP3Q96P47 875 aa11.58□□□□□ -0.55
CAPN3-203ENST00000349748 TMEM237Q96Q45 408 aa11.58□□□□□ -0.55
CAPN3-203ENST00000349748 TIPINQ9BVW5 301 aa11.58□□□□□ -0.55
CAPN3-203ENST00000349748 INTS9Q9NV88 658 aaKnown RBP11.58□□□□□ -0.55
CAPN3-203ENST00000349748 USP15Q9Y4E8 981 aaPredicted RBP11.58□□□□□ -0.55
CAPN3-203ENST00000349748 MYH7P12883 1935 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 TRIM43BA6NCK2 446 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 TRIM49BA6NDI0 452 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 BTBD11A6QL63 1104 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 MAGEB3O15480 346 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 PRC1O43663 620 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 CEP104O60308 925 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 TJP3O95049 919 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 FTCDO95954 541 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 KLHDC7AQ5VTJ3 777 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 CCDC80Q76M96 950 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 RBBP8NLQ8NC74 664 aaPredicted RBP11.58□□□□□ -0.56
CAPN3-203ENST00000349748 RMDN2Q96LZ7 410 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 ISCUQ9H1K1 167 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 THAP9Q9H5L6 903 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 METTL5Q9NRN9 209 aaKnown RBP11.58□□□□□ -0.56
CAPN3-203ENST00000349748 RMND1Q9NWS8 449 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 ARHGEF38Q9NXL2 777 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 MYH13Q9UKX3 1938 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 RGPD2P0DJD1 1756 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 PALLDQ8WX93 1383 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 F8VZ95 297 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 VARSP26640 1264 aaKnown RBP11.58□□□□□ -0.56
CAPN3-203ENST00000349748 EPHA10Q5JZY3 1008 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 KANK3Q6NY19 840 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 GIGYF2Q6Y7W6 1299 aaKnown RBP11.58□□□□□ -0.56
CAPN3-203ENST00000349748 IRF2BP1Q8IU81 584 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 PCMTD1Q96MG8 357 aaPredicted RBP11.58□□□□□ -0.56
CAPN3-203ENST00000349748 UBAC1Q9BSL1 405 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 DBNLQ9UJU6 430 aaKnown RBP11.58□□□□□ -0.56
CAPN3-203ENST00000349748 LRCH1Q9Y2L9 728 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 PCDHB6Q9Y5E3 794 aa11.58□□□□□ -0.56
CAPN3-203ENST00000349748 A0A0J9YVX5 310 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 BTBD18B2RXH4 712 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 HSPD1P10809 573 aaKnown RBP11.57□□□□□ -0.56
CAPN3-203ENST00000349748 IL2RBP14784 551 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 RASA1P20936 1047 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 OXCT1P55809 520 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 IFI35P80217 286 aaPredicted RBP11.57□□□□□ -0.56
CAPN3-203ENST00000349748 TMED1Q13445 227 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 LRRC14Q15048 493 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 C3orf67Q6ZVT6 689 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 CYP4X1Q8N118 509 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 ARHGAP18Q8N392 663 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 FAM13CQ8NE31 585 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 LPIN2Q92539 896 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 RNF25Q96BH1 459 aaPredicted RBP11.57□□□□□ -0.56
CAPN3-203ENST00000349748 DNAJC1Q96KC8 554 aaKnown RBP11.57□□□□□ -0.56
CAPN3-203ENST00000349748 DAAM1Q9Y4D1 1078 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 MYH10P35580 1976 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 PHRF1Q9P1Y6 1649 aaKnown RBP11.57□□□□□ -0.56
CAPN3-203ENST00000349748 A6NJR5 290 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 LGALS16A8MUM7 142 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 E7ENQ6 273 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 SPAG1Q07617 926 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 PAK1Q13153 545 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 WDR60Q8WVS4 1066 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 NCSTNQ92542 709 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 FAM192AQ9GZU8 254 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 USP20Q9Y2K6 914 aa11.57□□□□□ -0.56
CAPN3-203ENST00000349748 COL5A2P05997 1499 aaPredicted RBP11.57□□□□□ -0.56
CAPN3-203ENST00000349748 ABCC12Q96J65 1359 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 MAGEA13PA6NCF6 341 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 SIGLEC16A6NMB1 481 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 BOLA2-SMG1P6H3BVE0 249 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 LSM1O15116 133 aaKnown RBP11.56□□□□□ -0.56
CAPN3-203ENST00000349748 OAS1P00973 400 aaKnown RBP11.56□□□□□ -0.56
CAPN3-203ENST00000349748 ITGA2BP08514 1039 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 HOXB7P09629 217 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 HOXD12P35452 270 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 ATP11CQ8NB49 1132 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 MGARPQ8TDB4 240 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 CTNNBL1Q8WYA6 563 aaPredicted RBP11.56□□□□□ -0.56
CAPN3-203ENST00000349748 NSRP1Q9H0G5 558 aaKnown RBP11.56□□□□□ -0.56
CAPN3-203ENST00000349748 CTTNBP2NLQ9P2B4 639 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 ZNF180Q9UJW8 692 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 SH3GLB1Q9Y371 365 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 ASLP04424 464 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 DIXDC1Q155Q3 683 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 CERKLQ49MI3 558 aaPredicted RBP11.56□□□□□ -0.56
CAPN3-203ENST00000349748 AKAP4Q5JQC9 854 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 NANOGNBQ7Z5D8 188 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 ANKLE1Q8NAG6 615 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 ZCRB1Q8TBF4 217 aaKnown RBP11.56□□□□□ -0.56
CAPN3-203ENST00000349748 WDR66Q8TBY9 1149 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 ATP8B4Q8TF62 1192 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 CCDC113Q9H0I3 377 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 DBF4Q9UBU7 674 aaPredicted RBP11.56□□□□□ -0.56
CAPN3-203ENST00000349748 RGPD5Q99666 1765 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 MEGF6O75095 1541 aa11.56□□□□□ -0.56
CAPN3-203ENST00000349748 TCP11X1B4DZS4 312 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 DAPK3O43293 454 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 NDUFB5O43674 189 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms