RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 SPATA9Q9BWV2 254 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 CLSTN2Q9H4D0 955 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 TMEM51Q9NW97 253 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 SLAIN2Q9P270 581 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 ARMCX3Q9UH62 379 aaPredicted RBP6.52□□□□□ -1.37
RFC1-201ENST00000349703 MYOM2P54296 1465 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 DISP1Q96F81 1524 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 NRG3P56975 720 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 CCSAPQ6IQ19 270 aaPredicted RBP6.52□□□□□ -1.37
RFC1-201ENST00000349703 TXNDC11Q6PKC3 985 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 BLOC1S2Q6QNY1 142 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 LURAP1LQ8IV03 231 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 GHDCQ8N2G8 530 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 QRSL1Q9H0R6 528 aaKnown RBP6.52□□□□□ -1.37
RFC1-201ENST00000349703 YY1AP1Q9H869 796 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 RUVBL1Q9Y265 456 aaKnown RBP6.52□□□□□ -1.37
RFC1-201ENST00000349703 SF3B6Q9Y3B4 125 aaKnown RBP6.52□□□□□ -1.37
RFC1-201ENST00000349703 UNC13BO14795 1591 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 C2orf71A6NGG8 1288 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 TK2O00142 265 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 AQP7O14520 342 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 SERPINC1P01008 464 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 CLTBP09497 229 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 C7P10643 843 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 BMP4P12644 408 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 SYT1P21579 422 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 RRM1P23921 792 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 IREB2P48200 963 aaKnown RBP6.52□□□□□ -1.37
RFC1-201ENST00000349703 GMFBP60983 142 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 KCTD2Q14681 263 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 ZSCAN26Q16670 478 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 CEP85Q6P2H3 762 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 CAPN12Q6ZSI9 719 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 CEP70Q8NHQ1 597 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 DNAAF4Q8WXU2 420 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 CCDC114Q96M63 670 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 PRPF18Q99633 342 aaKnown RBP6.52□□□□□ -1.37
RFC1-201ENST00000349703 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.52□□□□□ -1.371e-6■■■■□ 21.2
RFC1-201ENST00000349703 IQGAP3Q86VI3 1631 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 TYW5A2RUC4 315 aaKnown RBP6.51□□□□□ -1.37
RFC1-201ENST00000349703 SYN3O14994 580 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 VAMP4O75379 141 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 HMOX1P09601 288 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 CACNB3P54284 484 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 CBFBQ13951 182 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 RCN2Q14257 317 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 IER5LQ5T953 404 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 DCAF15Q66K64 600 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 FIGNL1Q6PIW4 674 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 GATAD2AQ86YP4 633 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 DZANK1Q9NVP4 752 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 IQSEC2Q5JU85 1478 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 PTPRTO14522 1441 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 PTCH1Q13635 1447 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 COBLO75128 1261 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 ULK1O75385 1050 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 NUP62P37198 522 aaPredicted RBP6.51□□□□□ -1.37
RFC1-201ENST00000349703 MRPL12P52815 198 aaKnown RBP6.51□□□□□ -1.37
RFC1-201ENST00000349703 RNF4P78317 190 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 FANCCQ00597 558 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 RNF219Q5W0B1 726 aaPredicted RBP6.51□□□□□ -1.37
RFC1-201ENST00000349703 HGSNATQ68CP4 663 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 C10orf53Q8N6V4 93 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 TDRD7Q8NHU6 1098 aaKnown RBP6.51□□□□□ -1.37
RFC1-201ENST00000349703 ADAM19Q9H013 955 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 DACT1Q9NYF0 836 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 STAP2Q9UGK3 403 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 PCDHA2Q9Y5H9 948 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 SYCP2Q9BX26 1530 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 E2F8A0AVK6 867 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 TSPAN6O43657 245 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 GGPS1O95749 300 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 AFPP02771 609 aaKnown RBP6.51□□□□□ -1.37
RFC1-201ENST00000349703 ITIH2P19823 946 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 TUBB2AQ13885 445 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 VPS53Q5VIR6 699 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 BNC2Q6ZN30 1099 aaPredicted RBP6.51□□□□□ -1.37
RFC1-201ENST00000349703 RNF44Q7L0R7 432 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.51□□□□□ -1.377e-6■■□□□ 11.5
RFC1-201ENST00000349703 NUP93Q8N1F7 819 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 CLASRPQ8N2M8 674 aaKnown RBP6.51□□□□□ -1.37
RFC1-201ENST00000349703 TUBB2BQ9BVA1 445 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 CLDND1Q9NY35 253 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 PCDHA9Q9Y5H5 950 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 ERVK-7P63135 1459 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 TREHO43280 583 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 TRPA1O75762 1119 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 RAP2AP10114 183 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 NEK2P51955 445 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 POU4F2Q12837 409 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 POU4F3Q15319 338 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 INTS6LQ5JSJ4 861 aaKnown RBP6.51□□□□□ -1.37
RFC1-201ENST00000349703 PPP1R26Q5T8A7 1209 aaPredicted RBP6.51□□□□□ -1.37
RFC1-201ENST00000349703 CDKAL1Q5VV42 579 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 FBXO33Q7Z6M2 555 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 METTL16Q86W50 562 aaKnown RBP6.51□□□□□ -1.37
RFC1-201ENST00000349703 MTURNQ8N3F0 131 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 IER2Q9BTL4 223 aa6.51□□□□□ -1.37
RFC1-201ENST00000349703 CHORDC1Q9UHD1 332 aaPredicted RBP6.51□□□□□ -1.37
RFC1-201ENST00000349703 RABL2BQ9UNT1 228 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms