RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 GAP43P17677 238 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 VCAM1P19320 739 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 ERCC3P19447 782 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 HERVK_113P62684 666 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 SPP2Q13103 211 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 TUBB2AQ13885 445 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 EPHA7Q15375 998 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 BMT2Q1RMZ1 405 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 ARHGAP27Q6ZUM4 889 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 SLC35F6Q8N357 371 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 ZKSCAN4Q969J2 545 aaPredicted RBP22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 EIF3CQ99613 913 aaKnown RBP22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 TUBB2BQ9BVA1 445 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 CCDC94Q9BW85 323 aaPredicted RBP22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 UNC45AQ9H3U1 944 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 RAVER2Q9HCJ3 691 aaKnown RBP22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 MAP3K20Q9NYL2 800 aaKnown RBP22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 COL20A1Q9P218 1284 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 CTAGE9A4FU28 777 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 RSPH10B2B2RC85 870 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 RSPH10BP0C881 870 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 ALAS1P13196 640 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 PPP2R3AQ06190 1150 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 NIPA1Q7RTP0 329 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 SAMD3Q8N6K7 520 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 UBXN4Q92575 508 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 OLFML3Q9NRN5 406 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 FAM184BQ9ULE4 1060 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 PPP1R9AQ9ULJ8 1098 aa22.48■■□□□ 1.19
CHRNA3-202ENST00000348639 PDXKO00764 312 aa22.47■■□□□ 1.19
CHRNA3-202ENST00000348639 ITGB5P18084 799 aa22.47■■□□□ 1.19
CHRNA3-202ENST00000348639 HOXD13P35453 343 aa22.47■■□□□ 1.19
CHRNA3-202ENST00000348639 USP14P54578 494 aa22.47■■□□□ 1.19
CHRNA3-202ENST00000348639 KCNMA1Q12791 1236 aa22.47■■□□□ 1.19
CHRNA3-202ENST00000348639 C1orf186Q6ZWK4 172 aa22.47■■□□□ 1.19
CHRNA3-202ENST00000348639 NEK11Q8NG66 645 aa22.47■■□□□ 1.19
CHRNA3-202ENST00000348639 TRPM4Q8TD43 1214 aa22.47■■□□□ 1.19
CHRNA3-202ENST00000348639 NACC1Q96RE7 527 aa22.47■■□□□ 1.19
CHRNA3-202ENST00000348639 WRNIP1Q96S55 665 aa22.47■■□□□ 1.19
CHRNA3-202ENST00000348639 RPAP3Q9H6T3 665 aaPredicted RBP22.47■■□□□ 1.19
CHRNA3-202ENST00000348639 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.47■■□□□ 1.19
CHRNA3-202ENST00000348639 MYBP10242 640 aa22.47■■□□□ 1.19
CHRNA3-202ENST00000348639 NR2F2P24468 414 aa22.47■■□□□ 1.19
CHRNA3-202ENST00000348639 PNMA2Q9UL42 364 aa22.47■■□□□ 1.19
CHRNA3-202ENST00000348639 CTDP1Q9Y5B0 961 aaPredicted RBP22.47■■□□□ 1.19
CHRNA3-202ENST00000348639 RBBP6Q7Z6E9 1792 aaKnown RBP22.46■■□□□ 1.19
CHRNA3-202ENST00000348639 IPO7O95373 1038 aaKnown RBP22.46■■□□□ 1.19
CHRNA3-202ENST00000348639 BAP1Q92560 729 aa22.46■■□□□ 1.19
CHRNA3-202ENST00000348639 CALUO43852 315 aaPredicted RBP22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 PRPF6O94906 941 aaKnown RBP22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 APOBEC3FQ8IUX4 373 aaKnown RBP22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 SCYL3Q8IZE3 742 aa22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 CCDC155Q8N6L0 562 aa22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 SMCR8Q8TEV9 937 aaPredicted RBP22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 CCDC42Q96M95 316 aa22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 NAPGQ99747 312 aaPredicted RBP22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 PICK1Q9NRD5 415 aa22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 KCNH7Q9NS40 1196 aa22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 KCND2Q9NZV8 630 aa22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 ZNF112Q9UJU3 913 aa22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 CDC23Q9UJX2 597 aa22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 GUCA1BQ9UMX6 200 aa22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 FDX1P10109 184 aa22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 MUM1L1Q5H9M0 696 aa22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 PCNX4Q63HM2 1172 aa22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 FBXO38Q6PIJ6 1188 aa22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 NEK9Q8TD19 979 aa22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 SYTL5Q8TDW5 730 aaPredicted RBP22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 TYW1Q9NV66 732 aaKnown RBP22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 GGA3Q9NZ52 723 aa22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 GPRC5DQ9NZD1 345 aa22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 WRAP73Q9P2S5 460 aaPredicted RBP22.45■■□□□ 1.18
CHRNA3-202ENST00000348639 FRMPD4Q14CM0 1322 aa22.44■■□□□ 1.18
CHRNA3-202ENST00000348639 ZBTB39O15060 712 aa22.44■■□□□ 1.18
CHRNA3-202ENST00000348639 FAM13AO94988 1023 aa22.44■■□□□ 1.18
CHRNA3-202ENST00000348639 GCNT3O95395 438 aa22.44■■□□□ 1.18
CHRNA3-202ENST00000348639 CCDC122Q5T0U0 273 aa22.44■■□□□ 1.18
CHRNA3-202ENST00000348639 RRAGAQ7L523 313 aa22.44■■□□□ 1.18
CHRNA3-202ENST00000348639 FRMD5Q7Z6J6 570 aa22.44■■□□□ 1.18
CHRNA3-202ENST00000348639 KIAA1328Q86T90 577 aa22.44■■□□□ 1.18
CHRNA3-202ENST00000348639 IL31RAQ8NI17 732 aa22.44■■□□□ 1.18
CHRNA3-202ENST00000348639 ARHGAP20Q9P2F6 1191 aa22.44■■□□□ 1.18
CHRNA3-202ENST00000348639 TRIM10Q9UDY6 481 aa22.44■■□□□ 1.18
CHRNA3-202ENST00000348639 UBIAD1Q9Y5Z9 338 aa22.44■■□□□ 1.18
CHRNA3-202ENST00000348639 LRRC53A6NM62 1247 aa22.43■■□□□ 1.18
CHRNA3-202ENST00000348639 EIF3DO15371 548 aaKnown RBP eCLIP22.43■■□□□ 1.18
CHRNA3-202ENST00000348639 KRT86O43790 486 aa22.43■■□□□ 1.18
CHRNA3-202ENST00000348639 ZBED4O75132 1171 aa22.43■■□□□ 1.18
CHRNA3-202ENST00000348639 H2AFXP16104 143 aaPredicted RBP22.43■■□□□ 1.18
CHRNA3-202ENST00000348639 LXNQ9BS40 222 aa22.43■■□□□ 1.18
CHRNA3-202ENST00000348639 CEP72Q9P209 647 aa22.43■■□□□ 1.18
CHRNA3-202ENST00000348639 SEL1LQ9UBV2 794 aa22.43■■□□□ 1.18
CHRNA3-202ENST00000348639 PTPRAP18433 802 aa22.43■■□□□ 1.18
CHRNA3-202ENST00000348639 BACE1P56817 501 aa22.43■■□□□ 1.18
CHRNA3-202ENST00000348639 TKFCQ3LXA3 575 aa22.43■■□□□ 1.18
CHRNA3-202ENST00000348639 PDXDC1Q6P996 788 aa22.43■■□□□ 1.18
CHRNA3-202ENST00000348639 CACNA2D4Q7Z3S7 1137 aa22.43■■□□□ 1.18
CHRNA3-202ENST00000348639 JAKMIP2Q96AA8 810 aa22.43■■□□□ 1.18
CHRNA3-202ENST00000348639 NUCKS1Q9H1E3 243 aaKnown RBP22.43■■□□□ 1.18
CHRNA3-202ENST00000348639 BCAS3Q9H6U6 928 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms