RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 MAGEB6P1A0A0J9YX57 407 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 TRAF5O00463 557 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 FGFR1OPO95684 399 aaKnown RBP16.72■□□□□ 0.27
LMNA-201ENST00000347559 DYNLL1P63167 89 aaKnown RBP16.72■□□□□ 0.27
LMNA-201ENST00000347559 SLC30A9Q6PML9 568 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 PEX26Q7Z412 305 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 PBKQ96KB5 322 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 ZFATQ9P243 1243 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 TRMT112Q9UI30 125 aaKnown RBP16.72■□□□□ 0.27
LMNA-201ENST00000347559 PCDHA4Q9UN74 947 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 PNPLA7Q6ZV29 1317 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 SPDYE3A6NKU9 549 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 PDHA1P08559 390 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 PLTPP55058 493 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 ARMC3Q5W041 872 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 HEATR3Q7Z4Q2 680 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 DZIP3Q86Y13 1208 aaKnown RBP16.72■□□□□ 0.27
LMNA-201ENST00000347559 EIF1ADQ8N9N8 165 aaKnown RBP16.72■□□□□ 0.27
LMNA-201ENST00000347559 C7orf25Q9BPX7 421 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 NSRP1Q9H0G5 558 aaKnown RBP16.72■□□□□ 0.27
LMNA-201ENST00000347559 MLXIPLQ9NP71 852 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 USP54Q70EL1 1684 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 DDAH1O94760 285 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 NOL4O94818 638 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 LACTBP83111 547 aaPredicted RBP16.72■□□□□ 0.27
LMNA-201ENST00000347559 ATP11AP98196 1134 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 ASIC2Q16515 512 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 SLC17A8Q8NDX2 589 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 CENPTQ96BT3 561 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 TSC22D3Q99576 134 aa16.72■□□□□ 0.27
LMNA-201ENST00000347559 SCN11AQ9UI33 1791 aa16.71■□□□□ 0.27
LMNA-201ENST00000347559 CCNT1O60563 726 aaKnown RBP16.71■□□□□ 0.27
LMNA-201ENST00000347559 NEFHP12036 1026 aa16.71■□□□□ 0.27
LMNA-201ENST00000347559 KIF5BP33176 963 aa16.71■□□□□ 0.27
LMNA-201ENST00000347559 DENND2CQ68D51 928 aa16.71■□□□□ 0.27
LMNA-201ENST00000347559 ZMYND12Q9H0C1 365 aa16.71■□□□□ 0.27
LMNA-201ENST00000347559 FGFR1OP2Q9NVK5 253 aa16.71■□□□□ 0.27
LMNA-201ENST00000347559 ATP4AP20648 1035 aa16.71■□□□□ 0.27
LMNA-201ENST00000347559 PPP1R2P41236 205 aa16.71■□□□□ 0.27
LMNA-201ENST00000347559 MSH2P43246 934 aa16.71■□□□□ 0.27
LMNA-201ENST00000347559 EIF3BP55884 814 aaKnown RBP16.71■□□□□ 0.27
LMNA-201ENST00000347559 GIGYF2Q6Y7W6 1299 aaKnown RBP16.71■□□□□ 0.27
LMNA-201ENST00000347559 THEMISQ8N1K5 641 aaPredicted RBP16.71■□□□□ 0.27
LMNA-201ENST00000347559 ACTRT1Q8TDG2 376 aa16.71■□□□□ 0.27
LMNA-201ENST00000347559 ADAM7Q9H2U9 754 aa16.71■□□□□ 0.27
LMNA-201ENST00000347559 KCNMB3Q9NPA1 279 aa16.71■□□□□ 0.27
LMNA-201ENST00000347559 FLT1P17948 1338 aa16.71■□□□□ 0.26
LMNA-201ENST00000347559 ANKRD33BA6NCL7 494 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 GNAT1P11488 350 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 EPS15P42566 896 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 TMED8Q6PL24 325 aaPredicted RBP16.7■□□□□ 0.26
LMNA-201ENST00000347559 SV2BQ7L1I2 683 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 FAM114A2Q9NRY5 505 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 ADAM22Q9P0K1 906 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 TBC1D7Q9P0N9 293 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 NR2E1Q9Y466 385 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 USP17L12C9JPN9 530 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 USP17L21D6R901 530 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 FGGP02679 453 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 PCK1P35558 622 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 RAB27AP51159 221 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 MXRA7P84157 204 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 UBAP2Q5T6F2 1119 aaKnown RBP16.7■□□□□ 0.26
LMNA-201ENST00000347559 KRT28Q7Z3Y7 464 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 CABLES1Q8TDN4 633 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 NAF1Q96HR8 494 aaKnown RBP16.7■□□□□ 0.26
LMNA-201ENST00000347559 TSG101Q99816 390 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 PLA2G12BQ9BX93 195 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.7■□□□□ 0.26
LMNA-201ENST00000347559 PCDHA6Q9UN73 950 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 PCDHA8Q9Y5H6 950 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 FER1L4A9Z1Z3 1794 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 GOLGA6L10A0A0M3HER8 536 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 DPPA5A6NC42 116 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 MYMKA6NI61 221 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 MMP13P45452 471 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 COPS2P61201 443 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 SLC29A2Q14542 456 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 IFI16Q16666 785 aaKnown RBP16.7■□□□□ 0.26
LMNA-201ENST00000347559 SOGA3Q5TF21 947 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 OTUD6AQ7L8S5 288 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 NEK9Q8TD19 979 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 CNKSR1Q969H4 720 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 CALML4Q96GE6 196 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 ZCWPW1Q9H0M4 648 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 CUEDC2Q9H467 287 aa16.7■□□□□ 0.26
LMNA-201ENST00000347559 PAPOLBQ9NRJ5 636 aaKnown RBP16.7■□□□□ 0.26
LMNA-201ENST00000347559 DBR1Q9UK59 544 aaKnown RBP16.7■□□□□ 0.26
LMNA-201ENST00000347559 CCDC188H7C350 402 aa16.69■□□□□ 0.26
LMNA-201ENST00000347559 SNX3O60493 162 aa16.69■□□□□ 0.26
LMNA-201ENST00000347559 LUC7L3O95232 432 aaKnown RBP16.69■□□□□ 0.26
LMNA-201ENST00000347559 OR52Z1P0C646 297 aa16.69■□□□□ 0.26
LMNA-201ENST00000347559 TXKP42681 527 aa16.69■□□□□ 0.26
LMNA-201ENST00000347559 PMS2P54278 862 aa16.69■□□□□ 0.26
LMNA-201ENST00000347559 PTK2Q05397 1052 aa16.69■□□□□ 0.26
LMNA-201ENST00000347559 LRRC55Q6ZSA7 311 aa16.69■□□□□ 0.26
LMNA-201ENST00000347559 GLG1Q92896 1179 aa16.69■□□□□ 0.26
LMNA-201ENST00000347559 SNX24Q9Y343 169 aa16.69■□□□□ 0.26
LMNA-201ENST00000347559 CCDC169A6NNP5 214 aa16.69■□□□□ 0.26
LMNA-201ENST00000347559 TCP11X1B4DZS4 312 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms