RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 RDM1Q8NG50 284 aa21.31■■□□□ 1
CHMP4A-201ENST00000347519 SH3TC2Q8TF17 1288 aa21.31■■□□□ 1
CHMP4A-201ENST00000347519 AFG1LQ8WV93 481 aa21.31■■□□□ 1
CHMP4A-201ENST00000347519 EMID1Q96A84 441 aaPredicted RBP21.31■■□□□ 1
CHMP4A-201ENST00000347519 TCEAL9Q9UHQ7 104 aa21.31■■□□□ 1
CHMP4A-201ENST00000347519 KIAA1024Q9UPX6 916 aa21.31■■□□□ 1
CHMP4A-201ENST00000347519 MYH9P35579 1960 aaKnown RBP21.3■■□□□ 1
CHMP4A-201ENST00000347519 ZBTB39O15060 712 aa21.3■■□□□ 1
CHMP4A-201ENST00000347519 NKRFO15226 690 aaKnown RBP eCLIP21.3■■□□□ 1
CHMP4A-201ENST00000347519 AKR1A1P14550 325 aa21.3■■□□□ 1
CHMP4A-201ENST00000347519 CNGA1P29973 690 aa21.3■■□□□ 1
CHMP4A-201ENST00000347519 PSMC6P62333 389 aa21.3■■□□□ 1
CHMP4A-201ENST00000347519 RRAGBQ5VZM2 374 aa21.3■■□□□ 1
CHMP4A-201ENST00000347519 HAUS3Q68CZ6 603 aa21.3■■□□□ 1
CHMP4A-201ENST00000347519 SWSAP1Q6NVH7 229 aa21.3■■□□□ 1
CHMP4A-201ENST00000347519 PDXDC2PQ6P474 469 aa21.3■■□□□ 1
CHMP4A-201ENST00000347519 TPH2Q8IWU9 490 aa21.3■■□□□ 1
CHMP4A-201ENST00000347519 SEPT1Q8WYJ6 367 aa21.3■■□□□ 1
CHMP4A-201ENST00000347519 CALML4Q96GE6 196 aa21.3■■□□□ 1
CHMP4A-201ENST00000347519 ABHD8Q96I13 439 aa21.3■■□□□ 1
CHMP4A-201ENST00000347519 LXNQ9BS40 222 aa21.3■■□□□ 1
CHMP4A-201ENST00000347519 TUFT1Q9NNX1 390 aa21.3■■□□□ 1
CHMP4A-201ENST00000347519 BLOC1S4Q9NUP1 217 aa21.3■■□□□ 1
CHMP4A-201ENST00000347519 DDX19AQ9NUU7 478 aaKnown RBP21.3■■□□□ 1
CHMP4A-201ENST00000347519 GABBR1Q9UBS5 961 aa21.3■■□□□ 1
CHMP4A-201ENST00000347519 IGKV6D-21A0A0A0MT36 114 aa21.29■■□□□ 1
CHMP4A-201ENST00000347519 SEPT4O43236 478 aa21.29■■□□□ 1
CHMP4A-201ENST00000347519 ZNF862O60290 1169 aa21.29■■□□□ 1
CHMP4A-201ENST00000347519 P4HBP07237 508 aaKnown RBP21.29■■□□□ 1
CHMP4A-201ENST00000347519 PSAPP07602 524 aa21.29■■□□□ 1
CHMP4A-201ENST00000347519 TCF7P36402 384 aaPredicted RBP21.29■■□□□ 1
CHMP4A-201ENST00000347519 KLHL40Q2TBA0 621 aa21.29■■□□□ 1
CHMP4A-201ENST00000347519 MIS18BP1Q6P0N0 1132 aa21.29■■□□□ 1
CHMP4A-201ENST00000347519 TLK2Q86UE8 772 aa21.29■■□□□ 1
CHMP4A-201ENST00000347519 RASSF8Q8NHQ8 419 aa21.29■■□□□ 1
CHMP4A-201ENST00000347519 TMEM63CQ9P1W3 806 aa21.29■■□□□ 1
CHMP4A-201ENST00000347519 CCDC39Q9UFE4 941 aa21.29■■□□□ 1
CHMP4A-201ENST00000347519 E9PMD0 336 aa21.28■■□□□ 1
CHMP4A-201ENST00000347519 SLC26A4O43511 780 aa21.28■■□□□ 1
CHMP4A-201ENST00000347519 STBD1O95210 358 aa21.28■■□□□ 1
CHMP4A-201ENST00000347519 ATP4AP20648 1035 aa21.28■■□□□ 1
CHMP4A-201ENST00000347519 STAT6P42226 847 aa21.28■■□□□ 1
CHMP4A-201ENST00000347519 UTP14CQ5TAP6 766 aaKnown RBP21.28■■□□□ 1
CHMP4A-201ENST00000347519 KRBA2Q6ZNG9 492 aa21.28■■□□□ 1
CHMP4A-201ENST00000347519 GRAMD1CQ8IYS0 662 aa21.28■■□□□ 1
CHMP4A-201ENST00000347519 NEK9Q8TD19 979 aa21.28■■□□□ 1
CHMP4A-201ENST00000347519 CDK5RAP3Q96JB5 506 aa21.28■■□□□ 1
CHMP4A-201ENST00000347519 KDM3AQ9Y4C1 1321 aa21.28■■□□□ 1
CHMP4A-201ENST00000347519 STK24Q9Y6E0 443 aa21.28■■□□□ 1
CHMP4A-201ENST00000347519 IGSF9BQ9UPX0 1349 aa21.27■■□□□ 1
CHMP4A-201ENST00000347519 NOP56O00567 594 aaKnown RBP21.27■■□□□ 1
CHMP4A-201ENST00000347519 CTAGE5O15320 804 aa21.27■■□□□ 1
CHMP4A-201ENST00000347519 LGR5O75473 907 aa21.27■■□□□ 1
CHMP4A-201ENST00000347519 QARSP47897 775 aaKnown RBP21.27■■□□□ 1
CHMP4A-201ENST00000347519 CTU1Q7Z7A3 348 aaKnown RBP21.27■■□□□ 1
CHMP4A-201ENST00000347519 TRIM50Q86XT4 487 aa21.27■■□□□ 1
CHMP4A-201ENST00000347519 IQUBQ8NA54 791 aa21.27■■□□□ 1
CHMP4A-201ENST00000347519 PPTC7Q8NI37 304 aa21.27■■□□□ 1
CHMP4A-201ENST00000347519 STAMQ92783 540 aa21.27■■□□□ 1
CHMP4A-201ENST00000347519 MTRQ99707 1265 aa21.27■■□□□ 1
CHMP4A-201ENST00000347519 FRMPD3Q5JV73 1810 aa21.27■■□□□ 1
CHMP4A-201ENST00000347519 TMEM150BA6NC51 233 aa21.26■□□□□ 0.99
CHMP4A-201ENST00000347519 MYADML2A6NDP7 307 aa21.26■□□□□ 0.99
CHMP4A-201ENST00000347519 BACH1O14867 736 aa21.26■□□□□ 0.99
CHMP4A-201ENST00000347519 KINO60870 393 aaKnown RBP21.26■□□□□ 0.99
CHMP4A-201ENST00000347519 DUSP11O75319 330 aaKnown RBP21.26■□□□□ 0.99
CHMP4A-201ENST00000347519 MMP3P08254 477 aa21.26■□□□□ 0.99
CHMP4A-201ENST00000347519 PSMC5P62195 406 aa21.26■□□□□ 0.99
CHMP4A-201ENST00000347519 BEX3Q00994 111 aa21.26■□□□□ 0.99
CHMP4A-201ENST00000347519 MCM6Q14566 821 aa21.26■□□□□ 0.99
CHMP4A-201ENST00000347519 SKOR2Q2VWA4 1001 aaPredicted RBP21.26■□□□□ 0.99
CHMP4A-201ENST00000347519 CAVIN1Q6NZI2 390 aaKnown RBP21.26■□□□□ 0.99
CHMP4A-201ENST00000347519 PIGOQ8TEQ8 1089 aa21.26■□□□□ 0.99
CHMP4A-201ENST00000347519 RAD54LQ92698 747 aa21.26■□□□□ 0.99
CHMP4A-201ENST00000347519 ZNF302Q9NR11 478 aa21.26■□□□□ 0.99
CHMP4A-201ENST00000347519 Q9Y3F1 56 aa21.26■□□□□ 0.99
CHMP4A-201ENST00000347519 MAFBQ9Y5Q3 323 aaPredicted RBP21.26■□□□□ 0.99
CHMP4A-201ENST00000347519 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.25■□□□□ 0.99
CHMP4A-201ENST00000347519 SLFN14P0C7P3 912 aa21.25■□□□□ 0.99
CHMP4A-201ENST00000347519 HOXD8P13378 290 aaPredicted RBP21.25■□□□□ 0.99
CHMP4A-201ENST00000347519 CAMK4Q16566 473 aa21.25■□□□□ 0.99
CHMP4A-201ENST00000347519 SH3RF1Q7Z6J0 888 aa21.25■□□□□ 0.99
CHMP4A-201ENST00000347519 CNNM3Q8NE01 707 aa21.25■□□□□ 0.99
CHMP4A-201ENST00000347519 TIGD1Q96MW7 591 aa21.25■□□□□ 0.99
CHMP4A-201ENST00000347519 NT5C3AQ9H0P0 336 aa21.25■□□□□ 0.99
CHMP4A-201ENST00000347519 CLSTN2Q9H4D0 955 aa21.25■□□□□ 0.99
CHMP4A-201ENST00000347519 ZSWIM4Q9H7M6 989 aa21.25■□□□□ 0.99
CHMP4A-201ENST00000347519 ARID2Q68CP9 1835 aa21.25■□□□□ 0.99
CHMP4A-201ENST00000347519 SYNRGQ9UMZ2 1314 aa21.25■□□□□ 0.99
CHMP4A-201ENST00000347519 A6NJR5 290 aa21.24■□□□□ 0.99
CHMP4A-201ENST00000347519 LYPLA2O95372 231 aa21.24■□□□□ 0.99
CHMP4A-201ENST00000347519 PRR29P0C7W0 189 aa21.24■□□□□ 0.99
CHMP4A-201ENST00000347519 CASP1P29466 404 aa21.24■□□□□ 0.99
CHMP4A-201ENST00000347519 TRMT1LQ7Z2T5 733 aaKnown RBP21.24■□□□□ 0.99
CHMP4A-201ENST00000347519 C4orf19Q8IY42 314 aa21.24■□□□□ 0.99
CHMP4A-201ENST00000347519 AFAP1L1Q8TED9 768 aa21.24■□□□□ 0.99
CHMP4A-201ENST00000347519 ERCC4Q92889 916 aaPredicted RBP21.24■□□□□ 0.99
CHMP4A-201ENST00000347519 PAGE5Q96GU1 130 aa21.24■□□□□ 0.99
CHMP4A-201ENST00000347519 AP5M1Q9H0R1 490 aa21.24■□□□□ 0.99
CHMP4A-201ENST00000347519 UPF3AQ9H1J1 476 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms