RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 ZSWIM4Q9H7M6 989 aa12.24□□□□□ -0.45
ECM1-201ENST00000346569 EXOC1Q9NV70 894 aa12.24□□□□□ -0.45
ECM1-201ENST00000346569 PCDHA2Q9Y5H9 948 aa12.24□□□□□ -0.45
ECM1-201ENST00000346569 PCDHA10Q9Y5I2 948 aa12.24□□□□□ -0.45
ECM1-201ENST00000346569 ZNFX1Q9P2E3 1918 aaKnown RBP12.23□□□□□ -0.45
ECM1-201ENST00000346569 NPHP3-ACAD11A0A0J9YXS1 232 aa12.23□□□□□ -0.45
ECM1-201ENST00000346569 SSBP05455 408 aaKnown RBP eCLIP12.23□□□□□ -0.45
ECM1-201ENST00000346569 ZNF18P17022 549 aa12.23□□□□□ -0.45
ECM1-201ENST00000346569 ADORA2AP29274 412 aa12.23□□□□□ -0.45
ECM1-201ENST00000346569 WDR78Q5VTH9 848 aa12.23□□□□□ -0.45
ECM1-201ENST00000346569 SPATA1Q5VX52 437 aa12.23□□□□□ -0.45
ECM1-201ENST00000346569 SEPT14Q6ZU15 432 aa12.23□□□□□ -0.45
ECM1-201ENST00000346569 GPR142Q7Z601 462 aa12.23□□□□□ -0.45
ECM1-201ENST00000346569 SMAP1Q8IYB5 467 aaPredicted RBP12.23□□□□□ -0.45
ECM1-201ENST00000346569 BANK1Q8NDB2 785 aa12.23□□□□□ -0.45
ECM1-201ENST00000346569 PANK4Q9NVE7 773 aa12.23□□□□□ -0.45
ECM1-201ENST00000346569 FANCLQ9NW38 375 aa12.23□□□□□ -0.45
ECM1-201ENST00000346569 SLC9A2Q9UBY0 812 aa12.23□□□□□ -0.45
ECM1-201ENST00000346569 RWDD2AQ9UIY3 292 aa12.23□□□□□ -0.45
ECM1-201ENST00000346569 DBR1Q9UK59 544 aaKnown RBP12.23□□□□□ -0.45
ECM1-201ENST00000346569 DIS3Q9Y2L1 958 aaKnown RBP12.23□□□□□ -0.45
ECM1-201ENST00000346569 TELO2Q9Y4R8 837 aa12.23□□□□□ -0.45
ECM1-201ENST00000346569 THSD7BQ9C0I4 1608 aa12.22□□□□□ -0.45
ECM1-201ENST00000346569 ASB14A6NK59 587 aa12.22□□□□□ -0.45
ECM1-201ENST00000346569 TLR2O60603 784 aa12.22□□□□□ -0.45
ECM1-201ENST00000346569 STBD1O95210 358 aa12.22□□□□□ -0.45
ECM1-201ENST00000346569 MAPK4P31152 587 aa12.22□□□□□ -0.45
ECM1-201ENST00000346569 PPP1R2P41236 205 aa12.22□□□□□ -0.45
ECM1-201ENST00000346569 ZNF75DP51815 510 aa12.22□□□□□ -0.45
ECM1-201ENST00000346569 PSMC5P62195 406 aa12.22□□□□□ -0.45
ECM1-201ENST00000346569 GRB14Q14449 540 aa12.22□□□□□ -0.45
ECM1-201ENST00000346569 CCDC62Q6P9F0 684 aa12.22□□□□□ -0.45
ECM1-201ENST00000346569 KCNV1Q6PIU1 500 aa12.22□□□□□ -0.45
ECM1-201ENST00000346569 PLEKHH3Q7Z736 793 aa12.22□□□□□ -0.45
ECM1-201ENST00000346569 ZNF467Q7Z7K2 595 aaPredicted RBP12.22□□□□□ -0.45
ECM1-201ENST00000346569 CCDC65Q8IXS2 484 aa12.22□□□□□ -0.45
ECM1-201ENST00000346569 KIAA0895Q8NCT3 520 aa12.22□□□□□ -0.45
ECM1-201ENST00000346569 DHTKD1Q96HY7 919 aaPredicted RBP12.22□□□□□ -0.45
ECM1-201ENST00000346569 ZIC5Q96T25 663 aa12.22□□□□□ -0.45
ECM1-201ENST00000346569 MPHOSPH6Q99547 160 aaKnown RBP12.22□□□□□ -0.45
ECM1-201ENST00000346569 CPA4Q9UI42 421 aa12.22□□□□□ -0.45
ECM1-201ENST00000346569 DDX41Q9UJV9 622 aaKnown RBP12.22□□□□□ -0.45
ECM1-201ENST00000346569 IGKV6D-21A0A0A0MT36 114 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 SLC15A5A6NIM6 579 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 RASSF10A6NK89 507 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 ZNF862O60290 1169 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 IDEP14735 1019 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 STX17P56962 302 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 ACTR2P61160 394 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 PLCB2Q00722 1185 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 COASYQ13057 564 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 NEDD9Q14511 834 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 TAF1CQ15572 869 aaPredicted RBP12.21□□□□□ -0.45
ECM1-201ENST00000346569 UGCGQ16739 394 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 CENPPQ6IPU0 288 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 KLHL10Q6JEL2 608 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 MAMDC4Q6UXC1 1216 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 CYFIP1Q7L576 1253 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 TRMT44Q8IYL2 757 aaKnown RBP12.21□□□□□ -0.45
ECM1-201ENST00000346569 GUF1Q8N442 669 aaKnown RBP12.21□□□□□ -0.45
ECM1-201ENST00000346569 NELFBQ8WX92 580 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 HPS3Q969F9 1004 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 RUSC1Q9BVN2 902 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 JPH1Q9HDC5 661 aaPredicted RBP12.21□□□□□ -0.45
ECM1-201ENST00000346569 SLC39A2Q9NP94 309 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 SAMSN1Q9NSI8 373 aaKnown RBP12.21□□□□□ -0.45
ECM1-201ENST00000346569 ANKEF1Q9NU02 776 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 KCND2Q9NZV8 630 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 MAPK8IP1Q9UQF2 711 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 NFE2L3Q9Y4A8 694 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 SAMM50Q9Y512 469 aa12.21□□□□□ -0.45
ECM1-201ENST00000346569 SYNGAP1Q96PV0 1343 aa12.21□□□□□ -0.46
ECM1-201ENST00000346569 KIAA1217Q5T5P2 1943 aa12.21□□□□□ -0.46
ECM1-201ENST00000346569 GSTTP1A0A1W2PQM5 241 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 RBM47A0AV96 593 aaKnown RBP12.2□□□□□ -0.46
ECM1-201ENST00000346569 LRRC10BA6NIK2 292 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 ARIH2O95376 493 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 PSAPP07602 524 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 HSPA1AP0DMV8 641 aaKnown RBP12.2□□□□□ -0.46
ECM1-201ENST00000346569 HSPA1BP0DMV9 641 aaKnown RBP12.2□□□□□ -0.46
ECM1-201ENST00000346569 ATP1A3P13637 1013 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 UBA1P22314 1058 aaKnown RBP12.2□□□□□ -0.46
ECM1-201ENST00000346569 CCNE1P24864 410 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 RARRES1P49788 294 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 PMS1P54277 932 aaKnown RBP12.2□□□□□ -0.46
ECM1-201ENST00000346569 TPM4P67936 248 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 SREBF2Q12772 1141 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 PAK1Q13153 545 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 STIM1Q13586 685 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 LY6KQ17RY6 165 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 HERC4Q5GLZ8 1057 aaPredicted RBP12.2□□□□□ -0.46
ECM1-201ENST00000346569 MORN1Q5T089 497 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 CDKAL1Q5VV42 579 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 SWSAP1Q6NVH7 229 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 TTI2Q6NXR4 508 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 TAPT1Q6NXT6 567 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 MRFAP1L1Q96HT8 127 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 REEP2Q9BRK0 252 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 TRIM5Q9C035 493 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 ABT1Q9ULW3 272 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms