RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 ZNF302Q9NR11 478 aa17.85■□□□□ 0.45
TSPAN4-201ENST00000346501 TUBE1Q9UJT0 475 aa17.85■□□□□ 0.45
TSPAN4-201ENST00000346501 KAT6AQ92794 2004 aa17.84■□□□□ 0.45
TSPAN4-201ENST00000346501 TMEM265A0A087WTH1 108 aa17.84■□□□□ 0.45
TSPAN4-201ENST00000346501 POTEB3A0JP26 581 aa17.84■□□□□ 0.45
TSPAN4-201ENST00000346501 WDR64B1ANS9 1081 aa17.84■□□□□ 0.45
TSPAN4-201ENST00000346501 BAIAP3O94812 1187 aa17.84■□□□□ 0.45
TSPAN4-201ENST00000346501 ATG7O95352 703 aa17.84■□□□□ 0.45
TSPAN4-201ENST00000346501 LARGE1O95461 756 aa17.84■□□□□ 0.45
TSPAN4-201ENST00000346501 CTDNEP1O95476 244 aa17.84■□□□□ 0.45
TSPAN4-201ENST00000346501 GCFC2P16383 781 aaKnown RBP17.84■□□□□ 0.45
TSPAN4-201ENST00000346501 HOXC8P31273 242 aa17.84■□□□□ 0.45
TSPAN4-201ENST00000346501 HMGN5P82970 282 aaKnown RBP17.84■□□□□ 0.45
TSPAN4-201ENST00000346501 LETM2Q2VYF4 491 aa17.84■□□□□ 0.45
TSPAN4-201ENST00000346501 ZNF618Q5T7W0 954 aa17.84■□□□□ 0.45
TSPAN4-201ENST00000346501 LRCH2Q5VUJ6 765 aa17.84■□□□□ 0.45
TSPAN4-201ENST00000346501 POTEBQ6S5H4 581 aa17.84■□□□□ 0.45
TSPAN4-201ENST00000346501 NEK8Q86SG6 692 aa17.84■□□□□ 0.45
TSPAN4-201ENST00000346501 FAM184AQ8NB25 1140 aa17.84■□□□□ 0.45
TSPAN4-201ENST00000346501 CTAGE1Q96RT6 745 aa17.84■□□□□ 0.45
TSPAN4-201ENST00000346501 TELO2Q9Y4R8 837 aa17.84■□□□□ 0.45
TSPAN4-201ENST00000346501 PCDHA10Q9Y5I2 948 aa17.84■□□□□ 0.45
TSPAN4-201ENST00000346501 M0QZ92 97 aa17.83■□□□□ 0.44
TSPAN4-201ENST00000346501 ADAMTS3O15072 1205 aa17.83■□□□□ 0.44
TSPAN4-201ENST00000346501 HBP1O60381 514 aa17.83■□□□□ 0.44
TSPAN4-201ENST00000346501 SFNP31947 248 aa17.83■□□□□ 0.44
TSPAN4-201ENST00000346501 JAK3P52333 1124 aa17.83■□□□□ 0.44
TSPAN4-201ENST00000346501 IGBP1P78318 339 aa17.83■□□□□ 0.44
TSPAN4-201ENST00000346501 INF2Q27J81 1249 aa17.83■□□□□ 0.44
TSPAN4-201ENST00000346501 Q4G0T1 1027 aa17.83■□□□□ 0.44
TSPAN4-201ENST00000346501 RASIP1Q5U651 963 aa17.83■□□□□ 0.44
TSPAN4-201ENST00000346501 SWSAP1Q6NVH7 229 aa17.83■□□□□ 0.44
TSPAN4-201ENST00000346501 CNKSR3Q6P9H4 555 aa17.83■□□□□ 0.44
TSPAN4-201ENST00000346501 ABHD15Q6UXT9 468 aa17.83■□□□□ 0.44
TSPAN4-201ENST00000346501 CCDC83Q8IWF9 413 aa17.83■□□□□ 0.44
TSPAN4-201ENST00000346501 DDX25Q9UHL0 483 aaKnown RBP17.83■□□□□ 0.44
TSPAN4-201ENST00000346501 KIF3AQ9Y496 699 aa17.83■□□□□ 0.44
TSPAN4-201ENST00000346501 CYP3A7-CYP3A51PA0A087WV96 503 aa17.82■□□□□ 0.44
TSPAN4-201ENST00000346501 KIF28PB7ZC32 967 aa17.82■□□□□ 0.44
TSPAN4-201ENST00000346501 M0R2N6 131 aa17.82■□□□□ 0.44
TSPAN4-201ENST00000346501 DHX15O43143 795 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-201ENST00000346501 INSRRP14616 1297 aa17.82■□□□□ 0.44
TSPAN4-201ENST00000346501 ATP2A2P16615 1042 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-201ENST00000346501 CYP3A7P24462 503 aa17.82■□□□□ 0.44
TSPAN4-201ENST00000346501 DNAJB2P25686 324 aa17.82■□□□□ 0.44
TSPAN4-201ENST00000346501 IKBKEQ14164 716 aa17.82■□□□□ 0.44
TSPAN4-201ENST00000346501 PIK3AP1Q6ZUJ8 805 aa17.82■□□□□ 0.44
TSPAN4-201ENST00000346501 FAM167AQ96KS9 214 aa17.82■□□□□ 0.44
TSPAN4-201ENST00000346501 UIMC1Q96RL1 719 aa17.82■□□□□ 0.44
TSPAN4-201ENST00000346501 SLC9A7Q96T83 725 aa17.82■□□□□ 0.44
TSPAN4-201ENST00000346501 TRIP12Q14669 1992 aaPredicted RBP17.81■□□□□ 0.44
TSPAN4-201ENST00000346501 ABHD14A-ACY1A0A1B0GW23 586 aa17.81■□□□□ 0.44
TSPAN4-201ENST00000346501 MSH4O15457 936 aa17.81■□□□□ 0.44
TSPAN4-201ENST00000346501 BAG4O95429 457 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-201ENST00000346501 CCNE2O96020 404 aa17.81■□□□□ 0.44
TSPAN4-201ENST00000346501 CTSHP09668 335 aa17.81■□□□□ 0.44
TSPAN4-201ENST00000346501 GNL2Q13823 731 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-201ENST00000346501 PLCB4Q15147 1175 aa17.81■□□□□ 0.44
TSPAN4-201ENST00000346501 TRIM71Q2Q1W2 868 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-201ENST00000346501 RDM1Q8NG50 284 aa17.81■□□□□ 0.44
TSPAN4-201ENST00000346501 PHOSPHO2Q8TCD6 241 aa17.81■□□□□ 0.44
TSPAN4-201ENST00000346501 ATP8B4Q8TF62 1192 aa17.81■□□□□ 0.44
TSPAN4-201ENST00000346501 SEPT8Q92599 483 aa17.81■□□□□ 0.44
TSPAN4-201ENST00000346501 TIFAQ96CG3 184 aa17.81■□□□□ 0.44
TSPAN4-201ENST00000346501 PCYT2Q99447 389 aa17.81■□□□□ 0.44
TSPAN4-201ENST00000346501 DISC1Q9NRI5 854 aa17.81■□□□□ 0.44
TSPAN4-201ENST00000346501 CEP131Q9UPN4 1083 aa17.81■□□□□ 0.44
TSPAN4-201ENST00000346501 IGKV6D-21A0A0A0MT36 114 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 CHMP2AO43633 222 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 CCNT1O60563 726 aaKnown RBP17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 JAK2O60674 1132 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 TDP2O95551 362 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 CXCL10P02778 98 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 MMP1P03956 469 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 FDPSP14324 419 aaKnown RBP17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 MCM2P49736 904 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 ADAM17P78536 824 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 HIC1Q14526 733 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 NPY5RQ15761 445 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 ZNF484Q5JVG2 852 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 IER5Q5VY09 327 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 PPP4R3AQ6IN85 833 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 Q7L0L9 218 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 MIER3Q7Z3K6 550 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 RPAINQ86UA6 219 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 CCDC60Q8IWA6 550 aaPredicted RBP17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 BBXQ8WY36 941 aaPredicted RBP17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 SLC5A5Q92911 643 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 LENG9Q96B70 501 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 C8orf76Q96K31 380 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 FAM20AQ96MK3 541 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 SLC28A3Q9HAS3 691 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 NRBP2Q9NSY0 501 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 CXXC1Q9P0U4 656 aaPredicted RBP17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 GABBR1Q9UBS5 961 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 TANC1Q9C0D5 1861 aa17.8■□□□□ 0.44
TSPAN4-201ENST00000346501 COL1A2P08123 1366 aa17.79■□□□□ 0.44
TSPAN4-201ENST00000346501 MBLAC1A4D2B0 266 aaPredicted RBP17.79■□□□□ 0.44
TSPAN4-201ENST00000346501 FOSBP53539 338 aa17.79■□□□□ 0.44
TSPAN4-201ENST00000346501 KRT40Q6A162 431 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms