RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 PPIL2Q13356 520 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 BRD3Q15059 726 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 EPHA7Q15375 998 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 SPECC1LQ69YQ0 1117 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 GADL1Q6ZQY3 521 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 PRRT2Q7Z6L0 340 aaPredicted RBP14.2□□□□□ -0.14
CLK3-201ENST00000345005 CCDC65Q8IXS2 484 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 SYT2Q8N9I0 419 aaPredicted RBP14.2□□□□□ -0.14
CLK3-201ENST00000345005 IL31RAQ8NI17 732 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 NOC3LQ8WTT2 800 aaKnown RBP14.2□□□□□ -0.14
CLK3-201ENST00000345005 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 OTUD5Q96G74 571 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 PDCD2LQ9BRP1 358 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 UBXN6Q9BZV1 441 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 KCNH7Q9NS40 1196 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 PANK4Q9NVE7 773 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 MYH11P35749 1972 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 A0A1B0GTH6 734 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 IRF6O14896 467 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 FCER1AP12319 257 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 CYP11B2P19099 503 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 PLA2G4AP47712 749 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 EHHADHQ08426 723 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 PLS1Q14651 629 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 NR1I3Q14994 352 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 TREML2Q5T2D2 321 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 CHST13Q8NET6 341 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 GOLGA1Q92805 767 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 P2RX5Q93086 422 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 ZFP91Q96JP5 570 aaPredicted RBP14.2□□□□□ -0.14
CLK3-201ENST00000345005 CLMNQ96JQ2 1002 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 THAP9Q9H5L6 903 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 SLC39A2Q9NP94 309 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 PSD3Q9NYI0 1048 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 CWC15Q9P013 229 aaKnown RBP14.2□□□□□ -0.14
CLK3-201ENST00000345005 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.2□□□□□ -0.14
CLK3-201ENST00000345005 LIMA1Q9UHB6 759 aaKnown RBP14.2□□□□□ -0.14
CLK3-201ENST00000345005 KCNH4Q9UQ05 1017 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 LRRC10BA6NIK2 292 aa14.19□□□□□ -0.14
CLK3-201ENST00000345005 SLITRK3O94933 977 aa14.19□□□□□ -0.14
CLK3-201ENST00000345005 EYA4O95677 639 aa14.19□□□□□ -0.14
CLK3-201ENST00000345005 KRT18P05783 430 aaKnown RBP14.19□□□□□ -0.14
CLK3-201ENST00000345005 MYCLP12524 364 aaPredicted RBP14.19□□□□□ -0.14
CLK3-201ENST00000345005 CCND2P30279 289 aa14.19□□□□□ -0.14
CLK3-201ENST00000345005 PSMC6P62333 389 aa14.19□□□□□ -0.14
CLK3-201ENST00000345005 COASYQ13057 564 aa14.19□□□□□ -0.14
CLK3-201ENST00000345005 B3GNT9Q6UX72 402 aa14.19□□□□□ -0.14
CLK3-201ENST00000345005 GUF1Q8N442 669 aaKnown RBP14.19□□□□□ -0.14
CLK3-201ENST00000345005 KIAA0895Q8NCT3 520 aa14.19□□□□□ -0.14
CLK3-201ENST00000345005 NEK9Q8TD19 979 aa14.19□□□□□ -0.14
CLK3-201ENST00000345005 NSUN6Q8TEA1 469 aaKnown RBP14.19□□□□□ -0.14
CLK3-201ENST00000345005 TRIM47Q96LD4 638 aa14.19□□□□□ -0.14
CLK3-201ENST00000345005 PANX2Q96RD6 677 aa14.19□□□□□ -0.14
CLK3-201ENST00000345005 UNC45AQ9H3U1 944 aa14.19□□□□□ -0.14
CLK3-201ENST00000345005 AGO4Q9HCK5 861 aaKnown RBP14.19□□□□□ -0.14
CLK3-201ENST00000345005 TBC1D22BQ9NU19 505 aa14.19□□□□□ -0.14
CLK3-201ENST00000345005 RGL1Q9NZL6 768 aa14.19□□□□□ -0.14
CLK3-201ENST00000345005 LCTP09848 1927 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 CHMP2AO43633 222 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 IRX5P78411 483 aaPredicted RBP14.18□□□□□ -0.14
CLK3-201ENST00000345005 IRX3P78415 501 aaPredicted RBP14.18□□□□□ -0.14
CLK3-201ENST00000345005 CYP4A11Q02928 519 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 PABPC4Q13310 644 aaKnown RBP eCLIP14.18□□□□□ -0.14
CLK3-201ENST00000345005 MTMR1Q13613 665 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 TCP11X2Q5H9J9 407 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 TTI2Q6NXR4 508 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 LBX2Q6XYB7 198 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 MOB2Q70IA6 237 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 APTXQ7Z2E3 356 aaKnown RBP14.18□□□□□ -0.14
CLK3-201ENST00000345005 VSIG10LQ86VR7 867 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 TPH2Q8IWU9 490 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 CEP112Q8N8E3 955 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 ZNF526Q8TF50 670 aaPredicted RBP14.18□□□□□ -0.14
CLK3-201ENST00000345005 DYDC2Q96IM9 177 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 NACC1Q96RE7 527 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 CARD6Q9BX69 1037 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 INTS13Q9NVM9 706 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 ADD3Q9UEY8 706 aaKnown RBP14.18□□□□□ -0.14
CLK3-201ENST00000345005 FBXO40Q9UH90 709 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 CLEC11AQ9Y240 323 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 MRFAP1Q9Y605 127 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 CCDC151A5D8V7 595 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 TRIM49BA6NDI0 452 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 UNCXA6NJT0 531 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 KCNJ18B7U540 433 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 MAFGO15525 162 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 COBLO75128 1261 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 NR3C2P08235 984 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 EEF1GP26641 437 aaKnown RBP14.18□□□□□ -0.14
CLK3-201ENST00000345005 GNG11P61952 73 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 PPP2R3AQ06190 1150 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 CTTNQ14247 550 aaKnown RBP14.18□□□□□ -0.14
CLK3-201ENST00000345005 KCNJ12Q14500 433 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 ARSHQ5FYA8 562 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 FAM26FQ5R3K3 315 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 CENPPQ6IPU0 288 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 RSRC2Q7L4I2 434 aaKnown RBP14.18□□□□□ -0.14
CLK3-201ENST00000345005 FASTKD5Q7L8L6 764 aaKnown RBP14.18□□□□□ -0.14
CLK3-201ENST00000345005 MIER3Q7Z3K6 550 aa14.18□□□□□ -0.14
CLK3-201ENST00000345005 FAM114A1Q8IWE2 563 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms