RNA–Protein interactions for RNA: ENST00000344937.11

CLCN2-202, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLCN2, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-202ENST00000344937 NOX5Q96PH1 765 aa17.22■□□□□ 0.35
CLCN2-202ENST00000344937 ODF2LQ9ULJ1 636 aa17.22■□□□□ 0.35
CLCN2-202ENST00000344937 INHBEP58166 350 aa17.21■□□□□ 0.35
CLCN2-202ENST00000344937 KCNK18Q7Z418 384 aa17.21■□□□□ 0.35
CLCN2-202ENST00000344937 LRRC47Q8N1G4 583 aaKnown RBP17.21■□□□□ 0.35
CLCN2-202ENST00000344937 EPHB4P54760 987 aa17.21■□□□□ 0.35
CLCN2-202ENST00000344937 GABPAQ06546 454 aa17.21■□□□□ 0.35
CLCN2-202ENST00000344937 FAM43BQ6ZT52 329 aaPredicted RBP17.21■□□□□ 0.35
CLCN2-202ENST00000344937 NEK8Q86SG6 692 aa17.21■□□□□ 0.35
CLCN2-202ENST00000344937 RETREG2Q8NC44 543 aa17.21■□□□□ 0.35
CLCN2-202ENST00000344937 SNX29Q8TEQ0 813 aa17.21■□□□□ 0.35
CLCN2-202ENST00000344937 ANKS1AQ92625 1134 aa17.21■□□□□ 0.35
CLCN2-202ENST00000344937 MMTAG2Q9BU76 263 aaKnown RBP17.21■□□□□ 0.35
CLCN2-202ENST00000344937 TDRD3Q9H7E2 651 aaKnown RBP17.21■□□□□ 0.35
CLCN2-202ENST00000344937 SEC63Q9UGP8 760 aaKnown RBP17.21■□□□□ 0.35
CLCN2-202ENST00000344937 SERPINB13Q9UIV8 391 aa17.21■□□□□ 0.35
CLCN2-202ENST00000344937 TCP1P17987 556 aaKnown RBP17.2■□□□□ 0.34
CLCN2-202ENST00000344937 AMPD3Q01432 767 aa17.2■□□□□ 0.34
CLCN2-202ENST00000344937 GRM4Q14833 912 aa17.2■□□□□ 0.34
CLCN2-202ENST00000344937 ZSCAN29Q8IWY8 852 aaPredicted RBP17.2■□□□□ 0.34
CLCN2-202ENST00000344937 FAM133AQ8N9E0 248 aa17.2■□□□□ 0.34
CLCN2-202ENST00000344937 NOC3LQ8WTT2 800 aaKnown RBP17.2■□□□□ 0.34
CLCN2-202ENST00000344937 LSM14BQ9BX40 385 aaKnown RBP17.2■□□□□ 0.34
CLCN2-202ENST00000344937 DDTLA6NHG4 134 aaPredicted RBP17.2■□□□□ 0.34
CLCN2-202ENST00000344937 MPHOSPH10O00566 681 aaKnown RBP17.2■□□□□ 0.34
CLCN2-202ENST00000344937 SLC37A4O43826 429 aa17.2■□□□□ 0.34
CLCN2-202ENST00000344937 KIAA0754O94854 1291 aa17.2■□□□□ 0.34
CLCN2-202ENST00000344937 FSBPO95073 299 aa17.2■□□□□ 0.34
CLCN2-202ENST00000344937 KIAA0753Q2KHM9 967 aa17.2■□□□□ 0.34
CLCN2-202ENST00000344937 CEP85LQ5SZL2 805 aa17.2■□□□□ 0.34
CLCN2-202ENST00000344937 KLHDC7AQ5VTJ3 777 aa17.2■□□□□ 0.34
CLCN2-202ENST00000344937 MMGT1Q8N4V1 131 aa17.2■□□□□ 0.34
CLCN2-202ENST00000344937 ZDHHC15Q96MV8 337 aa17.2■□□□□ 0.34
CLCN2-202ENST00000344937 ERGIC2Q96RQ1 377 aa17.2■□□□□ 0.34
CLCN2-202ENST00000344937 AP1M1Q9BXS5 423 aa17.2■□□□□ 0.34
CLCN2-202ENST00000344937 SIK3Q9Y2K2 1263 aa17.2■□□□□ 0.34
CLCN2-202ENST00000344937 NPHP3-ACAD11A0A0J9YXS1 232 aa17.2■□□□□ 0.34
CLCN2-202ENST00000344937 KIF3CO14782 793 aa17.2■□□□□ 0.34
CLCN2-202ENST00000344937 KLRC1P26715 233 aa17.2■□□□□ 0.34
CLCN2-202ENST00000344937 CALCRLQ16602 461 aa17.2■□□□□ 0.34
CLCN2-202ENST00000344937 OTUD6BQ8N6M0 293 aa17.2■□□□□ 0.34
CLCN2-202ENST00000344937 FGFBP2Q9BYJ0 223 aa17.2■□□□□ 0.34
CLCN2-202ENST00000344937 USP17L5A8MUK1 530 aa17.19■□□□□ 0.34
CLCN2-202ENST00000344937 UBE2SQ16763 222 aa17.19■□□□□ 0.34
CLCN2-202ENST00000344937 CFAP221Q4G0U5 840 aa17.19■□□□□ 0.34
CLCN2-202ENST00000344937 DDX12PQ92771 950 aa17.19■□□□□ 0.34
CLCN2-202ENST00000344937 PURBQ96QR8 312 aaKnown RBP17.19■□□□□ 0.34
CLCN2-202ENST00000344937 GPCPD1Q9NPB8 672 aa17.19■□□□□ 0.34
CLCN2-202ENST00000344937 ZBTB12Q9Y330 459 aaPredicted RBP17.19■□□□□ 0.34
CLCN2-202ENST00000344937 SHMT1P34896 483 aa17.19■□□□□ 0.34
CLCN2-202ENST00000344937 EPS15P42566 896 aa17.19■□□□□ 0.34
CLCN2-202ENST00000344937 ACTN3Q08043 901 aaPredicted RBP17.19■□□□□ 0.34
CLCN2-202ENST00000344937 TRIM31Q9BZY9 425 aa17.19■□□□□ 0.34
CLCN2-202ENST00000344937 FAM198AQ9UFP1 575 aa17.19■□□□□ 0.34
CLCN2-202ENST00000344937 FOCADQ5VW36 1801 aa17.19■□□□□ 0.34
CLCN2-202ENST00000344937 ZNF233A6NK53 670 aa17.18■□□□□ 0.34
CLCN2-202ENST00000344937 GOLGA8KD6RF30 607 aa17.18■□□□□ 0.34
CLCN2-202ENST00000344937 MAN2A1Q16706 1144 aa17.18■□□□□ 0.34
CLCN2-202ENST00000344937 ODF2Q5BJF6 829 aa17.18■□□□□ 0.34
CLCN2-202ENST00000344937 LARP4BQ92615 738 aaKnown RBP17.18■□□□□ 0.34
CLCN2-202ENST00000344937 PRMT6Q96LA8 375 aaPredicted RBP17.18■□□□□ 0.34
CLCN2-202ENST00000344937 C6orf50Q9HD87 102 aa17.18■□□□□ 0.34
CLCN2-202ENST00000344937 KCNK3O14649 394 aa17.18■□□□□ 0.34
CLCN2-202ENST00000344937 GRB10Q13322 594 aa17.18■□□□□ 0.34
CLCN2-202ENST00000344937 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.18■□□□□ 0.34
CLCN2-202ENST00000344937 ADAT2Q7Z6V5 191 aaKnown RBP17.18■□□□□ 0.34
CLCN2-202ENST00000344937 REXO1Q8N1G1 1221 aaKnown RBP17.18■□□□□ 0.34
CLCN2-202ENST00000344937 LARGE2Q8N3Y3 721 aa17.18■□□□□ 0.34
CLCN2-202ENST00000344937 DNAJC18Q9H819 358 aa17.18■□□□□ 0.34
CLCN2-202ENST00000344937 C10orf71Q711Q0 1435 aa17.18■□□□□ 0.34
CLCN2-202ENST00000344937 PALM3A6NDB9 673 aaPredicted RBP17.18■□□□□ 0.34
CLCN2-202ENST00000344937 TMCO5BA8MYB1 307 aa17.18■□□□□ 0.34
CLCN2-202ENST00000344937 E7EVH7 732 aa17.18■□□□□ 0.34
CLCN2-202ENST00000344937 M0R2N6 131 aa17.18■□□□□ 0.34
CLCN2-202ENST00000344937 ACTN1P12814 892 aa17.18■□□□□ 0.34
CLCN2-202ENST00000344937 IFT88Q13099 833 aa17.18■□□□□ 0.34
CLCN2-202ENST00000344937 IFT20Q8IY31 132 aa17.18■□□□□ 0.34
CLCN2-202ENST00000344937 BLOC1S4Q9NUP1 217 aa17.18■□□□□ 0.34
CLCN2-202ENST00000344937 MTMR4Q9NYA4 1195 aa17.18■□□□□ 0.34
CLCN2-202ENST00000344937 CALRP27797 417 aaKnown RBP17.17■□□□□ 0.34
CLCN2-202ENST00000344937 WLSQ5T9L3 541 aa17.17■□□□□ 0.34
CLCN2-202ENST00000344937 SH3BP5LQ7L8J4 393 aa17.17■□□□□ 0.34
CLCN2-202ENST00000344937 C7orf25Q9BPX7 421 aa17.17■□□□□ 0.34
CLCN2-202ENST00000344937 A0A087X0T9 212 aa17.17■□□□□ 0.34
CLCN2-202ENST00000344937 FRMD3A2A2Y4 597 aa17.17■□□□□ 0.34
CLCN2-202ENST00000344937 MEFVO15553 781 aaPredicted RBP17.17■□□□□ 0.34
CLCN2-202ENST00000344937 FAM228BP0C875 321 aa17.17■□□□□ 0.34
CLCN2-202ENST00000344937 NAA35Q5VZE5 725 aa17.17■□□□□ 0.34
CLCN2-202ENST00000344937 CASKIN2Q8WXE0 1202 aa17.17■□□□□ 0.34
CLCN2-202ENST00000344937 TRIM6Q9C030 488 aaPredicted RBP17.17■□□□□ 0.34
CLCN2-202ENST00000344937 QSER1Q2KHR3 1735 aa17.16■□□□□ 0.34
CLCN2-202ENST00000344937 GNAQP50148 359 aa17.16■□□□□ 0.34
CLCN2-202ENST00000344937 SARNPP82979 210 aaKnown RBP17.16■□□□□ 0.34
CLCN2-202ENST00000344937 SLC9C1Q4G0N8 1177 aa17.16■□□□□ 0.34
CLCN2-202ENST00000344937 FAM83BQ5T0W9 1011 aa17.16■□□□□ 0.34
CLCN2-202ENST00000344937 SFMBT2Q5VUG0 894 aa17.16■□□□□ 0.34
CLCN2-202ENST00000344937 CENPPQ6IPU0 288 aa17.16■□□□□ 0.34
CLCN2-202ENST00000344937 CCDC84Q86UT8 332 aaPredicted RBP17.16■□□□□ 0.34
CLCN2-202ENST00000344937 BAP1Q92560 729 aa17.16■□□□□ 0.34
CLCN2-202ENST00000344937 KLC4Q9NSK0 619 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms