RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 TRMT1LQ7Z2T5 733 aaKnown RBP23.45■■□□□ 1.34
SMARCB1-202ENST00000344921 CKAP2LQ8IYA6 745 aa23.45■■□□□ 1.34
SMARCB1-202ENST00000344921 GABBR1Q9UBS5 961 aa23.45■■□□□ 1.34
SMARCB1-202ENST00000344921 GTF2IRD1Q9UHL9 959 aa23.45■■□□□ 1.34
SMARCB1-202ENST00000344921 TRPC6Q9Y210 931 aa23.45■■□□□ 1.34
SMARCB1-202ENST00000344921 IGKV6D-21A0A0A0MT36 114 aa23.44■■□□□ 1.34
SMARCB1-202ENST00000344921 OR52Z1P0C646 297 aa23.44■■□□□ 1.34
SMARCB1-202ENST00000344921 SMIM10L2AP0DMW4 78 aa23.44■■□□□ 1.34
SMARCB1-202ENST00000344921 SMIM10L2BP0DMW5 78 aa23.44■■□□□ 1.34
SMARCB1-202ENST00000344921 PDIA4P13667 645 aaKnown RBP23.44■■□□□ 1.34
SMARCB1-202ENST00000344921 PPP2R5CQ13362 524 aa23.44■■□□□ 1.34
SMARCB1-202ENST00000344921 PTGISQ16647 500 aa23.44■■□□□ 1.34
SMARCB1-202ENST00000344921 NCAPH2Q6IBW4 605 aa23.44■■□□□ 1.34
SMARCB1-202ENST00000344921 GDF6Q6KF10 455 aaPredicted RBP23.44■■□□□ 1.34
SMARCB1-202ENST00000344921 SESTD1Q86VW0 696 aa23.44■■□□□ 1.34
SMARCB1-202ENST00000344921 RDM1Q8NG50 284 aa23.44■■□□□ 1.34
SMARCB1-202ENST00000344921 TNPO1Q92973 898 aaKnown RBP23.44■■□□□ 1.34
SMARCB1-202ENST00000344921 MTMR9Q96QG7 549 aa23.44■■□□□ 1.34
SMARCB1-202ENST00000344921 VAV3Q9UKW4 847 aa23.44■■□□□ 1.34
SMARCB1-202ENST00000344921 C17orf102A2RUQ5 167 aa23.43■■□□□ 1.34
SMARCB1-202ENST00000344921 SLC26A2P50443 739 aa23.43■■□□□ 1.34
SMARCB1-202ENST00000344921 AFAP1L1Q8TED9 768 aa23.43■■□□□ 1.34
SMARCB1-202ENST00000344921 PDLIM7Q9NR12 457 aa23.43■■□□□ 1.34
SMARCB1-202ENST00000344921 CD4P01730 458 aa23.42■■□□□ 1.34
SMARCB1-202ENST00000344921 PTGDRQ13258 359 aa23.42■■□□□ 1.34
SMARCB1-202ENST00000344921 B3GNT9Q6UX72 402 aa23.42■■□□□ 1.34
SMARCB1-202ENST00000344921 SH3RF1Q7Z6J0 888 aa23.42■■□□□ 1.34
SMARCB1-202ENST00000344921 SETD4Q9NVD3 440 aa23.42■■□□□ 1.34
SMARCB1-202ENST00000344921 PDE4DIPQ5VU43 2346 aa23.42■■□□□ 1.34
SMARCB1-202ENST00000344921 POTEB3A0JP26 581 aa23.42■■□□□ 1.34
SMARCB1-202ENST00000344921 GNAT1P11488 350 aa23.42■■□□□ 1.34
SMARCB1-202ENST00000344921 PLCB4Q15147 1175 aa23.42■■□□□ 1.34
SMARCB1-202ENST00000344921 FOXD4L5Q5VV16 416 aaPredicted RBP23.42■■□□□ 1.34
SMARCB1-202ENST00000344921 POTEBQ6S5H4 581 aa23.42■■□□□ 1.34
SMARCB1-202ENST00000344921 FOXD4L4Q8WXT5 416 aaPredicted RBP23.42■■□□□ 1.34
SMARCB1-202ENST00000344921 ZSCAN16Q9H4T2 348 aaPredicted RBP23.42■■□□□ 1.34
SMARCB1-202ENST00000344921 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.42■■□□□ 1.34
SMARCB1-202ENST00000344921 MAFBQ9Y5Q3 323 aaPredicted RBP23.42■■□□□ 1.34
SMARCB1-202ENST00000344921 MYH9P35579 1960 aaKnown RBP23.41■■□□□ 1.34
SMARCB1-202ENST00000344921 EML1O00423 815 aa23.41■■□□□ 1.34
SMARCB1-202ENST00000344921 TECP42680 631 aa23.41■■□□□ 1.34
SMARCB1-202ENST00000344921 RESTQ13127 1097 aa23.41■■□□□ 1.34
SMARCB1-202ENST00000344921 PPFIA1Q13136 1202 aa23.41■■□□□ 1.34
SMARCB1-202ENST00000344921 ATP6V0A1Q93050 837 aa23.41■■□□□ 1.34
SMARCB1-202ENST00000344921 NRCAMQ92823 1304 aa23.41■■□□□ 1.34
SMARCB1-202ENST00000344921 KAT6AQ92794 2004 aa23.4■■□□□ 1.34
SMARCB1-202ENST00000344921 H0YGN5 161 aa23.4■■□□□ 1.34
SMARCB1-202ENST00000344921 CYP2C9P11712 490 aa23.4■■□□□ 1.34
SMARCB1-202ENST00000344921 RAG1P15918 1043 aa23.4■■□□□ 1.34
SMARCB1-202ENST00000344921 IGBP1P78318 339 aa23.4■■□□□ 1.34
SMARCB1-202ENST00000344921 ZNF200P98182 395 aaPredicted RBP23.4■■□□□ 1.34
SMARCB1-202ENST00000344921 TMEM266Q2M3C6 531 aa23.4■■□□□ 1.34
SMARCB1-202ENST00000344921 BANK1Q8NDB2 785 aa23.4■■□□□ 1.34
SMARCB1-202ENST00000344921 TRIM43BA6NCK2 446 aa23.39■■□□□ 1.34
SMARCB1-202ENST00000344921 LAD1O00515 517 aa23.39■■□□□ 1.34
SMARCB1-202ENST00000344921 INSRRP14616 1297 aa23.39■■□□□ 1.34
SMARCB1-202ENST00000344921 SPIRE1Q08AE8 756 aa23.39■■□□□ 1.34
SMARCB1-202ENST00000344921 TRIM43Q96BQ3 446 aaPredicted RBP23.39■■□□□ 1.34
SMARCB1-202ENST00000344921 PPP1R12CQ9BZL4 782 aa23.39■■□□□ 1.34
SMARCB1-202ENST00000344921 EPHA7Q15375 998 aa23.39■■□□□ 1.33
SMARCB1-202ENST00000344921 GRIK4Q16099 956 aa23.39■■□□□ 1.33
SMARCB1-202ENST00000344921 FAM173BQ6P4H8 233 aa23.39■■□□□ 1.33
SMARCB1-202ENST00000344921 C4orf32Q8N8J7 132 aa23.39■■□□□ 1.33
SMARCB1-202ENST00000344921 ATP8B4Q8TF62 1192 aa23.39■■□□□ 1.33
SMARCB1-202ENST00000344921 LMBR1Q8WVP7 490 aa23.39■■□□□ 1.33
SMARCB1-202ENST00000344921 PCDH10Q9P2E7 1040 aa23.39■■□□□ 1.33
SMARCB1-202ENST00000344921 DAXXQ9UER7 740 aaPredicted RBP23.39■■□□□ 1.33
SMARCB1-202ENST00000344921 IGSF9BQ9UPX0 1349 aa23.39■■□□□ 1.33
SMARCB1-202ENST00000344921 POTEMA6NI47 508 aa23.38■■□□□ 1.33
SMARCB1-202ENST00000344921 HBP1O60381 514 aa23.38■■□□□ 1.33
SMARCB1-202ENST00000344921 P4HBP07237 508 aaKnown RBP23.38■■□□□ 1.33
SMARCB1-202ENST00000344921 ANP32AP39687 249 aaKnown RBP23.38■■□□□ 1.33
SMARCB1-202ENST00000344921 HIC1Q14526 733 aa23.38■■□□□ 1.33
SMARCB1-202ENST00000344921 UGCGQ16739 394 aa23.38■■□□□ 1.33
SMARCB1-202ENST00000344921 BBXQ8WY36 941 aaPredicted RBP23.38■■□□□ 1.33
SMARCB1-202ENST00000344921 LBHD1Q9BQE6 289 aaPredicted RBP23.38■■□□□ 1.33
SMARCB1-202ENST00000344921 HIPK3Q9H422 1215 aa23.38■■□□□ 1.33
SMARCB1-202ENST00000344921 TBX21Q9UL17 535 aa23.38■■□□□ 1.33
SMARCB1-202ENST00000344921 CEP131Q9UPN4 1083 aa23.38■■□□□ 1.33
SMARCB1-202ENST00000344921 WDR81Q562E7 1941 aa23.38■■□□□ 1.33
SMARCB1-202ENST00000344921 KIAA0355O15063 1070 aa23.37■■□□□ 1.33
SMARCB1-202ENST00000344921 TREHO43280 583 aa23.37■■□□□ 1.33
SMARCB1-202ENST00000344921 ZSCAN22P10073 491 aaPredicted RBP23.37■■□□□ 1.33
SMARCB1-202ENST00000344921 ATP4AP20648 1035 aa23.37■■□□□ 1.33
SMARCB1-202ENST00000344921 PSMC5P62195 406 aa23.37■■□□□ 1.33
SMARCB1-202ENST00000344921 PRKCEQ02156 737 aa23.37■■□□□ 1.33
SMARCB1-202ENST00000344921 TRIP12Q14669 1992 aaPredicted RBP23.37■■□□□ 1.33
SMARCB1-202ENST00000344921 FAM167AQ96KS9 214 aa23.37■■□□□ 1.33
SMARCB1-202ENST00000344921 NRBP2Q9NSY0 501 aa23.37■■□□□ 1.33
SMARCB1-202ENST00000344921 RRN3P2A6NIE6 340 aa23.36■■□□□ 1.33
SMARCB1-202ENST00000344921 DKC1O60832 514 aaKnown RBP eCLIP23.36■■□□□ 1.33
SMARCB1-202ENST00000344921 QARSP47897 775 aaKnown RBP23.36■■□□□ 1.33
SMARCB1-202ENST00000344921 CYP4A11Q02928 519 aa23.36■■□□□ 1.33
SMARCB1-202ENST00000344921 PKP1Q13835 747 aa23.36■■□□□ 1.33
SMARCB1-202ENST00000344921 SF3A1Q15459 793 aaKnown RBP23.36■■□□□ 1.33
SMARCB1-202ENST00000344921 DTHD1Q6ZMT9 781 aa23.36■■□□□ 1.33
SMARCB1-202ENST00000344921 DYDC2Q96IM9 177 aa23.36■■□□□ 1.33
SMARCB1-202ENST00000344921 RAB34Q9BZG1 259 aa23.36■■□□□ 1.33
SMARCB1-202ENST00000344921 RGL1Q9NZL6 768 aa23.36■■□□□ 1.33
SMARCB1-202ENST00000344921 ZNF862O60290 1169 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms