RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 GDPD5Q8WTR4 605 aa14.18□□□□□ -0.14
SGCA-202ENST00000344627 SEPT1Q8WYJ6 367 aa14.18□□□□□ -0.14
SGCA-202ENST00000344627 BRF1Q92994 677 aa14.18□□□□□ -0.14
SGCA-202ENST00000344627 IFIH1Q9BYX4 1025 aaKnown RBP14.18□□□□□ -0.14
SGCA-202ENST00000344627 RNF216Q9NWF9 866 aaPredicted RBP14.18□□□□□ -0.14
SGCA-202ENST00000344627 UBIAD1Q9Y5Z9 338 aa14.18□□□□□ -0.14
SGCA-202ENST00000344627 RBAK-RBAKDNI3L0D1 243 aa14.17□□□□□ -0.14
SGCA-202ENST00000344627 STXBP3O00186 592 aa14.17□□□□□ -0.14
SGCA-202ENST00000344627 GPR37L1O60883 481 aa14.17□□□□□ -0.14
SGCA-202ENST00000344627 FOSP01100 380 aaPredicted RBP14.17□□□□□ -0.14
SGCA-202ENST00000344627 PSMA5P28066 241 aa14.17□□□□□ -0.14
SGCA-202ENST00000344627 HSPA4P34932 840 aa14.17□□□□□ -0.14
SGCA-202ENST00000344627 PLA2G5P39877 138 aa14.17□□□□□ -0.14
SGCA-202ENST00000344627 EPC2Q52LR7 807 aa14.17□□□□□ -0.14
SGCA-202ENST00000344627 TMEM31Q5JXX7 168 aa14.17□□□□□ -0.14
SGCA-202ENST00000344627 TYW1BQ6NUM6 668 aa14.17□□□□□ -0.14
SGCA-202ENST00000344627 PPP1R18Q6NYC8 613 aa14.17□□□□□ -0.14
SGCA-202ENST00000344627 FAM122AQ96E09 287 aa14.17□□□□□ -0.14
SGCA-202ENST00000344627 MXRA8Q9BRK3 442 aa14.17□□□□□ -0.14
SGCA-202ENST00000344627 SDF4Q9BRK5 362 aa14.17□□□□□ -0.14
SGCA-202ENST00000344627 FTHL17Q9BXU8 183 aa14.17□□□□□ -0.14
SGCA-202ENST00000344627 GLT8D2Q9H1C3 349 aa14.17□□□□□ -0.14
SGCA-202ENST00000344627 SMARCAD1Q9H4L7 1026 aa14.17□□□□□ -0.14
SGCA-202ENST00000344627 FAM217BQ9NTX9 383 aaPredicted RBP14.17□□□□□ -0.14
SGCA-202ENST00000344627 TMEM260Q9NX78 707 aa14.17□□□□□ -0.14
SGCA-202ENST00000344627 BARHL2Q9NY43 387 aa14.17□□□□□ -0.14
SGCA-202ENST00000344627 PTPRSQ13332 1948 aa14.16□□□□□ -0.14
SGCA-202ENST00000344627 C5orf67F2Z3F1 127 aa14.16□□□□□ -0.14
SGCA-202ENST00000344627 hCG_1984214I3L0E3 225 aa14.16□□□□□ -0.14
SGCA-202ENST00000344627 RPS6KB1P23443 525 aa14.16□□□□□ -0.14
SGCA-202ENST00000344627 IGBP1P78318 339 aa14.16□□□□□ -0.14
SGCA-202ENST00000344627 FUT2Q10981 343 aa14.16□□□□□ -0.14
SGCA-202ENST00000344627 PPFIA1Q13136 1202 aa14.16□□□□□ -0.14
SGCA-202ENST00000344627 TCTN1Q2MV58 587 aa14.16□□□□□ -0.14
SGCA-202ENST00000344627 NAALADL2Q58DX5 795 aa14.16□□□□□ -0.14
SGCA-202ENST00000344627 JAKMIP3Q5VZ66 844 aa14.16□□□□□ -0.14
SGCA-202ENST00000344627 KRT40Q6A162 431 aa14.16□□□□□ -0.14
SGCA-202ENST00000344627 TMEM192Q8IY95 271 aa14.16□□□□□ -0.14
SGCA-202ENST00000344627 ZNF713Q8N859 430 aaPredicted RBP14.16□□□□□ -0.14
SGCA-202ENST00000344627 CYP2W1Q8TAV3 490 aa14.16□□□□□ -0.14
SGCA-202ENST00000344627 LMBR1Q8WVP7 490 aa14.16□□□□□ -0.14
SGCA-202ENST00000344627 KCNB2Q92953 911 aa14.16□□□□□ -0.14
SGCA-202ENST00000344627 IL17RAQ96F46 866 aa14.16□□□□□ -0.14
SGCA-202ENST00000344627 ANO3Q9BYT9 981 aa14.16□□□□□ -0.14
SGCA-202ENST00000344627 PRKAG3Q9UGI9 489 aa14.16□□□□□ -0.14
SGCA-202ENST00000344627 GSTTP1A0A1W2PQM5 241 aa14.15□□□□□ -0.14
SGCA-202ENST00000344627 PI4K2BG5E9Z4 385 aa14.15□□□□□ -0.14
SGCA-202ENST00000344627 SCG2P13521 617 aa14.15□□□□□ -0.14
SGCA-202ENST00000344627 ALADP13716 330 aa14.15□□□□□ -0.14
SGCA-202ENST00000344627 SLC26A2P50443 739 aa14.15□□□□□ -0.14
SGCA-202ENST00000344627 RCAN1P53805 252 aa14.15□□□□□ -0.14
SGCA-202ENST00000344627 GPM6BQ13491 265 aa14.15□□□□□ -0.14
SGCA-202ENST00000344627 COL19A1Q14993 1142 aa14.15□□□□□ -0.14
SGCA-202ENST00000344627 PFKFB3Q16875 520 aaPredicted RBP14.15□□□□□ -0.14
SGCA-202ENST00000344627 IER5Q5VY09 327 aa14.15□□□□□ -0.14
SGCA-202ENST00000344627 FIBCD1Q8N539 461 aa14.15□□□□□ -0.14
SGCA-202ENST00000344627 BANK1Q8NDB2 785 aa14.15□□□□□ -0.14
SGCA-202ENST00000344627 NEK9Q8TD19 979 aa14.15□□□□□ -0.14
SGCA-202ENST00000344627 PABPC5Q96DU9 382 aaKnown RBP14.15□□□□□ -0.14
SGCA-202ENST00000344627 NECAB3Q96P71 396 aaPredicted RBP14.15□□□□□ -0.14
SGCA-202ENST00000344627 C17orf80Q9BSJ5 609 aa14.15□□□□□ -0.14
SGCA-202ENST00000344627 C11orf84Q9BUA3 381 aaPredicted RBP14.15□□□□□ -0.14
SGCA-202ENST00000344627 PLVAPQ9BX97 442 aa14.15□□□□□ -0.14
SGCA-202ENST00000344627 NSUN3Q9H649 340 aaKnown RBP14.15□□□□□ -0.14
SGCA-202ENST00000344627 AZI2Q9H6S1 392 aa14.15□□□□□ -0.14
SGCA-202ENST00000344627 JPH1Q9HDC5 661 aaPredicted RBP14.15□□□□□ -0.14
SGCA-202ENST00000344627 KCNH7Q9NS40 1196 aa14.15□□□□□ -0.14
SGCA-202ENST00000344627 SLC9A2Q9UBY0 812 aa14.15□□□□□ -0.14
SGCA-202ENST00000344627 MTUS1Q9ULD2 1270 aa14.15□□□□□ -0.14
SGCA-202ENST00000344627 PRRC2BQ5JSZ5 2229 aaKnown RBP14.14□□□□□ -0.15
SGCA-202ENST00000344627 MICAL3Q7RTP6 2002 aa14.14□□□□□ -0.15
SGCA-202ENST00000344627 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.14□□□□□ -0.15
SGCA-202ENST00000344627 MBLAC1A4D2B0 266 aaPredicted RBP14.14□□□□□ -0.15
SGCA-202ENST00000344627 DDX39AO00148 427 aaKnown RBP14.14□□□□□ -0.15
SGCA-202ENST00000344627 PPFIA3O75145 1194 aa14.14□□□□□ -0.15
SGCA-202ENST00000344627 ARP10275 920 aa14.14□□□□□ -0.15
SGCA-202ENST00000344627 CCT2P78371 535 aaKnown RBP14.14□□□□□ -0.15
SGCA-202ENST00000344627 AP3B2Q13367 1082 aa14.14□□□□□ -0.15
SGCA-202ENST00000344627 GRIK4Q16099 956 aa14.14□□□□□ -0.15
SGCA-202ENST00000344627 CEP55Q53EZ4 464 aa14.14□□□□□ -0.15
SGCA-202ENST00000344627 ODR4Q5SWX8 454 aa14.14□□□□□ -0.15
SGCA-202ENST00000344627 MCTP2Q6DN12 878 aa14.14□□□□□ -0.15
SGCA-202ENST00000344627 FAM178BQ8IXR5 827 aa14.14□□□□□ -0.15
SGCA-202ENST00000344627 GJD3Q8N144 294 aa14.14□□□□□ -0.15
SGCA-202ENST00000344627 NME8Q8N427 588 aa14.14□□□□□ -0.15
SGCA-202ENST00000344627 CCDC12Q8WUD4 166 aaPredicted RBP14.14□□□□□ -0.15
SGCA-202ENST00000344627 PHKBQ93100 1093 aa14.14□□□□□ -0.15
SGCA-202ENST00000344627 PPP2R3CQ969Q6 453 aa14.14□□□□□ -0.15
SGCA-202ENST00000344627 UIMC1Q96RL1 719 aa14.14□□□□□ -0.15
SGCA-202ENST00000344627 SLC26A6Q9BXS9 759 aa14.14□□□□□ -0.15
SGCA-202ENST00000344627 C6orf50Q9HD87 102 aa14.14□□□□□ -0.15
SGCA-202ENST00000344627 TUBE1Q9UJT0 475 aa14.14□□□□□ -0.15
SGCA-202ENST00000344627 TRPC6Q9Y210 931 aa14.14□□□□□ -0.15
SGCA-202ENST00000344627 NFASCO94856 1347 aa14.14□□□□□ -0.15
SGCA-202ENST00000344627 GRXCR2A6NFK2 248 aa14.13□□□□□ -0.15
SGCA-202ENST00000344627 M0QZ92 97 aa14.13□□□□□ -0.15
SGCA-202ENST00000344627 UPP2O95045 317 aa14.13□□□□□ -0.15
SGCA-202ENST00000344627 KCNA5P22460 613 aa14.13□□□□□ -0.15
SGCA-202ENST00000344627 RUFY4Q6ZNE9 571 aa14.13□□□□□ -0.15
SGCA-202ENST00000344627 TSHZ1Q6ZSZ6 1077 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms