RNA–Protein interactions for RNA: ENST00000344135.5

TRIO-201, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-201ENST00000344135 CNNM4Q6P4Q7 775 aa9.5□□□□□ -0.89
TRIO-201ENST00000344135 TRMT1Q9NXH9 659 aaKnown RBP9.5□□□□□ -0.89
TRIO-201ENST00000344135 AGTPBP1Q9UPW5 1226 aa9.5□□□□□ -0.89
TRIO-201ENST00000344135 PCDHA2Q9Y5H9 948 aa9.5□□□□□ -0.89
TRIO-201ENST00000344135 LCTP09848 1927 aa9.49□□□□□ -0.89
TRIO-201ENST00000344135 A0A1B0GTH6 734 aa9.49□□□□□ -0.89
TRIO-201ENST00000344135 N4BP3O15049 544 aa9.49□□□□□ -0.89
TRIO-201ENST00000344135 SKILP12757 684 aa9.49□□□□□ -0.89
TRIO-201ENST00000344135 CCZ1BP86790 482 aa9.49□□□□□ -0.89
TRIO-201ENST00000344135 CCZ1P86791 482 aaPredicted RBP9.49□□□□□ -0.89
TRIO-201ENST00000344135 SETQ01105 290 aaPredicted RBP9.49□□□□□ -0.89
TRIO-201ENST00000344135 CCDC155Q8N6L0 562 aa9.49□□□□□ -0.89
TRIO-201ENST00000344135 KIAA1524Q8TCG1 905 aa9.49□□□□□ -0.89
TRIO-201ENST00000344135 NSUN6Q8TEA1 469 aaKnown RBP9.49□□□□□ -0.89
TRIO-201ENST00000344135 SCFD1Q8WVM8 642 aa9.49□□□□□ -0.89
TRIO-201ENST00000344135 GPRC5CQ9NQ84 441 aa9.49□□□□□ -0.89
TRIO-201ENST00000344135 KCNH4Q9UQ05 1017 aa9.49□□□□□ -0.89
TRIO-201ENST00000344135 RBBP6Q7Z6E9 1792 aaKnown RBP9.49□□□□□ -0.89
TRIO-201ENST00000344135 PRPF6O94906 941 aaKnown RBP9.49□□□□□ -0.89
TRIO-201ENST00000344135 NMT1P30419 496 aaKnown RBP9.49□□□□□ -0.89
TRIO-201ENST00000344135 HOXA7P31268 230 aaPredicted RBP9.49□□□□□ -0.89
TRIO-201ENST00000344135 HOXD13P35453 343 aa9.49□□□□□ -0.89
TRIO-201ENST00000344135 PPIL2Q13356 520 aa9.49□□□□□ -0.89
TRIO-201ENST00000344135 CST9Q5W186 159 aa9.49□□□□□ -0.89
TRIO-201ENST00000344135 PVALEFA0A1B0GWK0 134 aa9.49□□□□□ -0.89
TRIO-201ENST00000344135 ATP2A1O14983 1001 aa9.49□□□□□ -0.89
TRIO-201ENST00000344135 CCNE1P24864 410 aa9.49□□□□□ -0.89
TRIO-201ENST00000344135 CLCN1P35523 988 aa9.49□□□□□ -0.89
TRIO-201ENST00000344135 POLR3CQ9BUI4 534 aaPredicted RBP9.49□□□□□ -0.89
TRIO-201ENST00000344135 DOCK3Q8IZD9 2030 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 SOWAHBA6NEL2 793 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 B4DLN1 442 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 OAZ1P54368 228 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 STIM1Q13586 685 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 ANKRD13CQ8N6S4 541 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 INPP4AQ96PE3 977 aaPredicted RBP9.48□□□□□ -0.89
TRIO-201ENST00000344135 RIT2Q99578 217 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 FRMPD4Q14CM0 1322 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 CXCL11O14625 94 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 EYA4O95677 639 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 FDX1P10109 184 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 COPB1P53618 953 aaKnown RBP9.48□□□□□ -0.89
TRIO-201ENST00000344135 CENPPQ6IPU0 288 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 CYFIP1Q7L576 1253 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 PROCA1Q8NCQ7 364 aaPredicted RBP9.48□□□□□ -0.89
TRIO-201ENST00000344135 MS4A4AQ96JQ5 239 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 CNOT6LQ96LI5 555 aaKnown RBP9.48□□□□□ -0.89
TRIO-201ENST00000344135 SCN4AP35499 1836 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 BTBD19C9JJ37 291 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 ZNF862O60290 1169 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 BCRP11274 1271 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 NOLC1Q14978 699 aaKnown RBP eCLIP9.48□□□□□ -0.89
TRIO-201ENST00000344135 C1orf186Q6ZWK4 172 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 DAW1Q8N136 415 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 SMCR8Q8TEV9 937 aaPredicted RBP9.48□□□□□ -0.89
TRIO-201ENST00000344135 BRI3BPQ8WY22 251 aa9.48□□□□□ -0.89
TRIO-201ENST00000344135 CCDC47Q96A33 483 aaKnown RBP9.48□□□□□ -0.89
TRIO-201ENST00000344135 USO1O60763 962 aaKnown RBP9.47□□□□□ -0.89
TRIO-201ENST00000344135 KCNA2P16389 499 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 SFPQP23246 707 aaKnown RBP eCLIP9.47□□□□□ -0.89
TRIO-201ENST00000344135 CCND2P30279 289 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 FXR1P51114 621 aaKnown RBP eCLIP9.47□□□□□ -0.89
TRIO-201ENST00000344135 EPHA7Q15375 998 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 SPECC1LQ69YQ0 1117 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 CCDC65Q8IXS2 484 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 MYOCDQ8IZQ8 938 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 PTPN18Q99952 460 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 GBA2Q9HCG7 927 aaPredicted RBP9.47□□□□□ -0.89
TRIO-201ENST00000344135 CCL15-CCL14A0A0B4J2E2 113 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 UBXN1Q04323 297 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 RBL2Q08999 1139 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 CCL15Q16663 113 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 GJC2Q5T442 439 aaPredicted RBP9.47□□□□□ -0.89
TRIO-201ENST00000344135 RIOX2Q8IUF8 465 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 MYCT1Q8N699 235 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 DHTKD1Q96HY7 919 aaPredicted RBP9.47□□□□□ -0.89
TRIO-201ENST00000344135 MRPL44Q9H9J2 332 aaKnown RBP9.47□□□□□ -0.89
TRIO-201ENST00000344135 TISP43B9A030 160 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 POTEB2H3BUK9 544 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 PDHXO00330 501 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 CLIC2O15247 247 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 GCNT3O95395 438 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 APBA1Q02410 837 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 MTF1Q14872 753 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 SWSAP1Q6NVH7 229 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 NLRX1Q86UT6 975 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 CCDC60Q8IWA6 550 aaPredicted RBP9.47□□□□□ -0.89
TRIO-201ENST00000344135 GUF1Q8N442 669 aaKnown RBP9.47□□□□□ -0.89
TRIO-201ENST00000344135 FGD4Q96M96 766 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 TUBGCP2Q9BSJ2 902 aa9.47□□□□□ -0.89
TRIO-201ENST00000344135 BACH1O14867 736 aa9.46□□□□□ -0.89
TRIO-201ENST00000344135 CBFA2T2O43439 604 aa9.46□□□□□ -0.89
TRIO-201ENST00000344135 ZNF500O60304 480 aaPredicted RBP9.46□□□□□ -0.89
TRIO-201ENST00000344135 CASP14P31944 242 aa9.46□□□□□ -0.89
TRIO-201ENST00000344135 ALDH5A1P51649 535 aaPredicted RBP9.46□□□□□ -0.89
TRIO-201ENST00000344135 SNAPC2Q13487 334 aa9.46□□□□□ -0.89
TRIO-201ENST00000344135 LY6KQ17RY6 165 aa9.46□□□□□ -0.89
TRIO-201ENST00000344135 LRRC55Q6ZSA7 311 aa9.46□□□□□ -0.89
TRIO-201ENST00000344135 TC2NQ8N9U0 490 aa9.46□□□□□ -0.89
TRIO-201ENST00000344135 C16orf45Q96MC5 204 aaPredicted RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms