RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 GBP3Q9H0R5 595 aa16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 EHD2Q9NZN4 543 aa16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 VAV3Q9UKW4 847 aa16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 SNX12Q9UMY4 172 aa16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 SMCHD1A6NHR9 2005 aa16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 FRMD3A2A2Y4 597 aa16.4■□□□□ 0.22
VIPAS39-202ENST00000343765 HOXA7P31268 230 aaPredicted RBP16.4■□□□□ 0.22
VIPAS39-202ENST00000343765 DCAF17Q5H9S7 520 aaPredicted RBP16.4■□□□□ 0.22
VIPAS39-202ENST00000343765 CDAN1Q8IWY9 1227 aa16.4■□□□□ 0.22
VIPAS39-202ENST00000343765 ALS2CR12Q96Q35 445 aa16.4■□□□□ 0.22
VIPAS39-202ENST00000343765 PITPNM2Q9BZ72 1349 aa16.4■□□□□ 0.22
VIPAS39-202ENST00000343765 VEZTQ9HBM0 779 aa16.4■□□□□ 0.22
VIPAS39-202ENST00000343765 TMOD2Q9NZR1 351 aa16.4■□□□□ 0.22
VIPAS39-202ENST00000343765 PCNTO95613 3336 aa16.4■□□□□ 0.22
VIPAS39-202ENST00000343765 TBX3O15119 743 aa16.4■□□□□ 0.22
VIPAS39-202ENST00000343765 NPM3O75607 178 aaKnown RBP16.4■□□□□ 0.22
VIPAS39-202ENST00000343765 GCNT3O95395 438 aa16.4■□□□□ 0.22
VIPAS39-202ENST00000343765 ASTE1Q2TB18 679 aaPredicted RBP16.4■□□□□ 0.22
VIPAS39-202ENST00000343765 FOXR2Q6PJQ5 311 aa16.4■□□□□ 0.22
VIPAS39-202ENST00000343765 CCDC102AQ96A19 550 aa16.4■□□□□ 0.22
VIPAS39-202ENST00000343765 FAM20AQ96MK3 541 aa16.4■□□□□ 0.22
VIPAS39-202ENST00000343765 HDAC9Q9UKV0 1011 aa16.4■□□□□ 0.22
VIPAS39-202ENST00000343765 ZBTB12Q9Y330 459 aaPredicted RBP16.4■□□□□ 0.22
VIPAS39-202ENST00000343765 ATRNL1Q5VV63 1379 aa16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 LRRIQ3A6PVS8 624 aaPredicted RBP16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 TBCAO75347 108 aaKnown RBP16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 LCA5LO95447 670 aa16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 HOXD13P35453 343 aa16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 KCNA1Q09470 495 aa16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 KNOP1Q1ED39 458 aaKnown RBP16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 TCERG1LQ5VWI1 586 aa16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 WDR93Q6P2C0 686 aa16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 C7orf43Q8WVR3 580 aa16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 IKZF4Q9H2S9 585 aa16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 ZBTB39O15060 712 aa16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 CLIC2O15247 247 aa16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 PHACTR2O75167 634 aa16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 MIGA2Q7L4E1 593 aa16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 CREG2Q8IUH2 290 aa16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 TPH2Q8IWU9 490 aa16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 WDR18Q9BV38 432 aa16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 ARHGEF10LQ9HCE6 1279 aa16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 VPS18Q9P253 973 aa16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 RABGAP1Q9Y3P9 1069 aa16.39■□□□□ 0.21
VIPAS39-202ENST00000343765 EIF3JO75822 258 aaKnown RBP16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 SERPING1P05155 500 aa16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 GPS2Q13227 327 aa16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 OSBPL9Q96SU4 736 aa16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 ARMCX3Q9UH62 379 aaPredicted RBP16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 SSU72P8A0A1W2PR75 194 aa16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 SLC9A1P19634 815 aa16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 POLD1P28340 1107 aa16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 CYP2C19P33261 490 aa16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 EZH2Q15910 746 aaKnown RBP16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 EDRF1Q3B7T1 1238 aa16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 BTNL9Q6UXG8 535 aa16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 MYH10P35580 1976 aa16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 SPDYE2BA6NHP3 402 aa16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 SPDYE6P0CI01 402 aa16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 CIITAP33076 1130 aa16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 MMP14P50281 582 aa16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 MARSP56192 900 aaKnown RBP16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 KLHL30Q0D2K2 578 aa16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 MAPK8IP2Q13387 824 aaPredicted RBP16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 MCTP2Q6DN12 878 aa16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 EDEM3Q9BZQ6 932 aa16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 ADAMTS1Q9UHI8 967 aa16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 FAM184BQ9ULE4 1060 aa16.38■□□□□ 0.21
VIPAS39-202ENST00000343765 AKAP3O75969 853 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 MYBL2P10244 700 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 CASP4P49662 377 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 ASIC2Q16515 512 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 CCDC181Q5TID7 509 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 LRCH2Q5VUJ6 765 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 PPP4R3CPQ6ZMV5 832 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 DYDC2Q96IM9 177 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 RPGRIP1Q96KN7 1286 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 NOX5Q96PH1 765 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 PACSIN1Q9BY11 444 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 IGLV3-22A0A075B6J6 115 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 SLC26A4O43511 780 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 TUBBP07437 444 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 DLGAP5Q15398 846 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 DNAAF5Q86Y56 855 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 KSR1Q8IVT5 923 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 GANQ9H2C0 597 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 FBXO28Q9NVF7 368 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 HERC5Q9UII4 1024 aaKnown RBP16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 ZBTB21Q9ULJ3 1066 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 HYOU1Q9Y4L1 999 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 PCDHB13Q9Y5F0 798 aa16.37■□□□□ 0.21
VIPAS39-202ENST00000343765 A0A087X0T9 212 aa16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 FAM228BP0C875 321 aa16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 IQCEQ6IPM2 695 aa16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 HDAC7Q8WUI4 952 aa16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 GLIS2Q9BZE0 524 aaPredicted RBP16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 TMEM39BQ9GZU3 492 aa16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 NUCKS1Q9H1E3 243 aaKnown RBP16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 GOPCQ9HD26 462 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms