RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 PRPF40AO75400 957 aaKnown RBP8.3□□□□□ -1.08
ZNF540-202ENST00000343599 ATG7O95352 703 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 ADCY5O95622 1261 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 MMP3P08254 477 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 GLULP15104 373 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 TCF3P15923 654 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 PPM1AP35813 382 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 ARHGAP8P85298 464 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 ARHGAP1Q07960 439 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 ADGRE1Q14246 886 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 SART3Q15020 963 aaKnown RBP8.3□□□□□ -1.08
ZNF540-202ENST00000343599 RABEP1Q15276 862 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 ITFG2Q969R8 447 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 CALR3Q96L12 384 aaKnown RBP8.3□□□□□ -1.08
ZNF540-202ENST00000343599 DBNDD2Q9BQY9 259 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 FBXO4Q9UKT5 387 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 RRP15Q9Y3B9 282 aaKnown RBP8.3□□□□□ -1.08
ZNF540-202ENST00000343599 PCDHB15Q9Y5E8 787 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 PDE4DIPQ5VU43 2346 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 SPTLC1O15269 473 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 PYGBP11216 843 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 ZNF16P17020 682 aaPredicted RBP8.29□□□□□ -1.08
ZNF540-202ENST00000343599 SMPD1P17405 629 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 SCNN1AP37088 669 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 DPP6P42658 865 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 MTHFRP42898 656 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 NEDD9Q14511 834 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 NSUN6Q8TEA1 469 aaKnown RBP8.29□□□□□ -1.08
ZNF540-202ENST00000343599 GLMNQ92990 594 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 NKX2-4Q9H2Z4 354 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 A1CFQ9NQ94 594 aaKnown RBP8.29□□□□□ -1.08
ZNF540-202ENST00000343599 ANK1P16157 1881 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 IGKV6D-21A0A0A0MT36 114 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 B4GALT4O60513 344 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 ZNF76P36508 570 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 ZSCAN26Q16670 478 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 MAP9Q49MG5 647 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 GJC2Q5T442 439 aaPredicted RBP8.29□□□□□ -1.08
ZNF540-202ENST00000343599 FBXO38Q6PIJ6 1188 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 MAPKAPK5Q8IW41 473 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 FBXO18Q8NFZ0 1043 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 GOLGA5Q8TBA6 731 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 ACER1Q8TDN7 264 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 DUSP9Q99956 384 aaKnown RBP8.29□□□□□ -1.08
ZNF540-202ENST00000343599 TMEM175Q9BSA9 504 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 CHST12Q9NRB3 414 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.29□□□□□ -1.08
ZNF540-202ENST00000343599 FHOD1Q9Y613 1164 aa8.29□□□□□ -1.08
ZNF540-202ENST00000343599 KCNJ6P48051 423 aa8.28□□□□□ -1.08
ZNF540-202ENST00000343599 ANAPC15P60006 121 aa8.28□□□□□ -1.08
ZNF540-202ENST00000343599 NHLH1Q02575 133 aa8.28□□□□□ -1.08
ZNF540-202ENST00000343599 NAA30Q147X3 362 aaPredicted RBP8.28□□□□□ -1.08
ZNF540-202ENST00000343599 SYDE2Q5VT97 1194 aa8.28□□□□□ -1.08
ZNF540-202ENST00000343599 SNRNP48Q6IEG0 339 aaKnown RBP8.28□□□□□ -1.08
ZNF540-202ENST00000343599 CCDC112Q8NEF3 446 aa8.28□□□□□ -1.08
ZNF540-202ENST00000343599 NEK11Q8NG66 645 aa8.28□□□□□ -1.08
ZNF540-202ENST00000343599 DDX1Q92499 740 aaKnown RBP8.28□□□□□ -1.08
ZNF540-202ENST00000343599 CTAGE1Q96RT6 745 aa8.28□□□□□ -1.08
ZNF540-202ENST00000343599 NGRNQ9NPE2 291 aaKnown RBP8.28□□□□□ -1.08
ZNF540-202ENST00000343599 CPP00450 1065 aa8.28□□□□□ -1.08
ZNF540-202ENST00000343599 AKR1B1P15121 316 aa8.28□□□□□ -1.08
ZNF540-202ENST00000343599 HOXA9P31269 272 aa8.28□□□□□ -1.08
ZNF540-202ENST00000343599 IRS1P35568 1242 aa8.28□□□□□ -1.08
ZNF540-202ENST00000343599 PLCD1P51178 756 aa8.28□□□□□ -1.08
ZNF540-202ENST00000343599 TIMM10P62072 90 aa8.28□□□□□ -1.08
ZNF540-202ENST00000343599 ZNF543Q08ER8 600 aa8.28□□□□□ -1.08
ZNF540-202ENST00000343599 RNF20Q5VTR2 975 aa8.28□□□□□ -1.08
ZNF540-202ENST00000343599 CCDC85AQ96PX6 553 aaPredicted RBP8.28□□□□□ -1.08
ZNF540-202ENST00000343599 V9GYY5 206 aaPredicted RBP8.28□□□□□ -1.08
ZNF540-202ENST00000343599 MBTPS2O43462 519 aa8.28□□□□□ -1.08
ZNF540-202ENST00000343599 UBXN6Q9BZV1 441 aa8.28□□□□□ -1.08
ZNF540-202ENST00000343599 SLC2A4RGQ9NR83 387 aa8.28□□□□□ -1.08
ZNF540-202ENST00000343599 CD207Q9UJ71 328 aa8.28□□□□□ -1.08
ZNF540-202ENST00000343599 SMIM35A0A1B0GVV1 85 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 H2AFXP16104 143 aaPredicted RBP8.27□□□□□ -1.09
ZNF540-202ENST00000343599 DUSP6Q16828 381 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 SH3RF1Q7Z6J0 888 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 RSPH3Q86UC2 560 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 FBXL6Q8N531 539 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.27□□□□□ -1.09
ZNF540-202ENST00000343599 CASP10Q92851 521 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 SYAP1Q96A49 352 aaPredicted RBP8.27□□□□□ -1.09
ZNF540-202ENST00000343599 MFRPQ9BY79 579 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 RIOX1Q9H6W3 641 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 RNF146Q9NTX7 359 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 ABCF2Q9UG63 623 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 USP25Q9UHP3 1055 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 ADGRA3Q8IWK6 1321 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 LINC01553A4QN01 128 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 ANKRD33BA6NCL7 494 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 SPATA31C2B4DYI2 1134 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 TPD52L2O43399 206 aaKnown RBP8.27□□□□□ -1.09
ZNF540-202ENST00000343599 PSEN2P49810 448 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 TPM4P67936 248 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 PICALMQ13492 652 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 SLFN13Q68D06 897 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 SLC4A10Q6U841 1118 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 MOXD1Q6UVY6 613 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 APBB1IPQ7Z5R6 666 aaPredicted RBP8.27□□□□□ -1.09
ZNF540-202ENST00000343599 NCAPG2Q86XI2 1143 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms