RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 TAAR1Q96RJ0 339 aa20.58■□□□□ 0.89
HOXA9-201ENST00000343483 WDR24Q96S15 920 aa20.58■□□□□ 0.89
HOXA9-201ENST00000343483 RIT2Q99578 217 aa20.58■□□□□ 0.89
HOXA9-201ENST00000343483 LUC7L2Q9Y383 392 aaKnown RBP20.58■□□□□ 0.89
HOXA9-201ENST00000343483 ADGRG1Q9Y653 693 aa20.58■□□□□ 0.89
HOXA9-201ENST00000343483 RSPH10B2B2RC85 870 aa20.58■□□□□ 0.88
HOXA9-201ENST00000343483 C19orf81C9J6K1 198 aa20.58■□□□□ 0.88
HOXA9-201ENST00000343483 RSPH10BP0C881 870 aa20.58■□□□□ 0.88
HOXA9-201ENST00000343483 KLK7P49862 253 aa20.58■□□□□ 0.88
HOXA9-201ENST00000343483 CASP5P51878 434 aa20.58■□□□□ 0.88
HOXA9-201ENST00000343483 VWA3BQ502W6 1294 aa20.58■□□□□ 0.88
HOXA9-201ENST00000343483 FOXR2Q6PJQ5 311 aa20.58■□□□□ 0.88
HOXA9-201ENST00000343483 POLD4Q9HCU8 107 aa20.58■□□□□ 0.88
HOXA9-201ENST00000343483 RNF146Q9NTX7 359 aa20.58■□□□□ 0.88
HOXA9-201ENST00000343483 MAP3K20Q9NYL2 800 aaKnown RBP20.58■□□□□ 0.88
HOXA9-201ENST00000343483 RIPK3Q9Y572 518 aa20.58■□□□□ 0.88
HOXA9-201ENST00000343483 ZBTB39O15060 712 aa20.57■□□□□ 0.88
HOXA9-201ENST00000343483 BCRP11274 1271 aa20.57■□□□□ 0.88
HOXA9-201ENST00000343483 TKFCQ3LXA3 575 aa20.57■□□□□ 0.88
HOXA9-201ENST00000343483 DLK2Q6UY11 383 aa20.57■□□□□ 0.88
HOXA9-201ENST00000343483 C12orf42Q96LP6 360 aa20.57■□□□□ 0.88
HOXA9-201ENST00000343483 NDST4Q9H3R1 872 aa20.57■□□□□ 0.88
HOXA9-201ENST00000343483 TMOD4Q9NZQ9 345 aa20.57■□□□□ 0.88
HOXA9-201ENST00000343483 FECHP22830 423 aa20.57■□□□□ 0.88
HOXA9-201ENST00000343483 MRPS9P82933 396 aaKnown RBP20.57■□□□□ 0.88
HOXA9-201ENST00000343483 MTMR1Q13613 665 aa20.57■□□□□ 0.88
HOXA9-201ENST00000343483 EPHA7Q15375 998 aa20.57■□□□□ 0.88
HOXA9-201ENST00000343483 MAN2A1Q16706 1144 aa20.57■□□□□ 0.88
HOXA9-201ENST00000343483 ERCC6LQ2NKX8 1250 aa20.57■□□□□ 0.88
HOXA9-201ENST00000343483 SNRNP48Q6IEG0 339 aaKnown RBP20.57■□□□□ 0.88
HOXA9-201ENST00000343483 RINT1Q6NUQ1 792 aa20.57■□□□□ 0.88
HOXA9-201ENST00000343483 TMTC1Q8IUR5 882 aa20.57■□□□□ 0.88
HOXA9-201ENST00000343483 RMDN3Q96TC7 470 aa20.57■□□□□ 0.88
HOXA9-201ENST00000343483 WRAP73Q9P2S5 460 aaPredicted RBP20.57■□□□□ 0.88
HOXA9-201ENST00000343483 CAPN11Q9UMQ6 739 aa20.57■□□□□ 0.88
HOXA9-201ENST00000343483 MYCLP12524 364 aaPredicted RBP20.56■□□□□ 0.88
HOXA9-201ENST00000343483 ERVK-24P63145 666 aa20.56■□□□□ 0.88
HOXA9-201ENST00000343483 PGM5Q15124 567 aa20.56■□□□□ 0.88
HOXA9-201ENST00000343483 CYP26C1Q6V0L0 522 aa20.56■□□□□ 0.88
HOXA9-201ENST00000343483 NIPA1Q7RTP0 329 aa20.56■□□□□ 0.88
HOXA9-201ENST00000343483 SAMD3Q8N6K7 520 aa20.56■□□□□ 0.88
HOXA9-201ENST00000343483 BANK1Q8NDB2 785 aa20.56■□□□□ 0.88
HOXA9-201ENST00000343483 MNS1Q8NEH6 495 aa20.56■□□□□ 0.88
HOXA9-201ENST00000343483 OR8K1Q8NGG5 319 aa20.56■□□□□ 0.88
HOXA9-201ENST00000343483 PURBQ96QR8 312 aaKnown RBP20.56■□□□□ 0.88
HOXA9-201ENST00000343483 LXNQ9BS40 222 aa20.56■□□□□ 0.88
HOXA9-201ENST00000343483 KCTD10Q9H3F6 313 aa20.56■□□□□ 0.88
HOXA9-201ENST00000343483 TAF1DQ9H5J8 278 aaPredicted RBP20.56■□□□□ 0.88
HOXA9-201ENST00000343483 UBIAD1Q9Y5Z9 338 aa20.56■□□□□ 0.88
HOXA9-201ENST00000343483 DSG3P32926 999 aa20.55■□□□□ 0.88
HOXA9-201ENST00000343483 COG2Q14746 738 aa20.55■□□□□ 0.88
HOXA9-201ENST00000343483 CCDC40Q4G0X9 1142 aa20.55■□□□□ 0.88
HOXA9-201ENST00000343483 EAPPQ56P03 285 aaPredicted RBP20.55■□□□□ 0.88
HOXA9-201ENST00000343483 NOL9Q5SY16 702 aaKnown RBP20.55■□□□□ 0.88
HOXA9-201ENST00000343483 B3GNT9Q6UX72 402 aa20.55■□□□□ 0.88
HOXA9-201ENST00000343483 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.55■□□□□ 0.88
HOXA9-201ENST00000343483 NACC1Q96RE7 527 aa20.55■□□□□ 0.88
HOXA9-201ENST00000343483 ERGIC2Q96RQ1 377 aa20.55■□□□□ 0.88
HOXA9-201ENST00000343483 NUP58Q9BVL2 599 aa20.55■□□□□ 0.88
HOXA9-201ENST00000343483 AGO4Q9HCK5 861 aaKnown RBP20.55■□□□□ 0.88
HOXA9-201ENST00000343483 LZTFL1Q9NQ48 299 aa20.55■□□□□ 0.88
HOXA9-201ENST00000343483 JADE2Q9NQC1 790 aa20.55■□□□□ 0.88
HOXA9-201ENST00000343483 COL4A3BPQ9Y5P4 624 aa20.55■□□□□ 0.88
HOXA9-201ENST00000343483 EPHX2P34913 555 aa20.55■□□□□ 0.88
HOXA9-201ENST00000343483 TSR1Q2NL82 804 aaKnown RBP20.55■□□□□ 0.88
HOXA9-201ENST00000343483 ARHGEF16Q5VV41 709 aa20.55■□□□□ 0.88
HOXA9-201ENST00000343483 MIER3Q7Z3K6 550 aa20.55■□□□□ 0.88
HOXA9-201ENST00000343483 PXMP2Q9NR77 195 aa20.55■□□□□ 0.88
HOXA9-201ENST00000343483 ADARB2Q9NS39 739 aaKnown RBP20.55■□□□□ 0.88
HOXA9-201ENST00000343483 FRMPD4Q14CM0 1322 aa20.55■□□□□ 0.88
HOXA9-201ENST00000343483 SCN4AP35499 1836 aa20.55■□□□□ 0.88
HOXA9-201ENST00000343483 RASSF10A6NK89 507 aa20.54■□□□□ 0.88
HOXA9-201ENST00000343483 SFI1A8K8P3 1242 aa20.54■□□□□ 0.88
HOXA9-201ENST00000343483 USP2O75604 605 aaPredicted RBP20.54■□□□□ 0.88
HOXA9-201ENST00000343483 MYBP10242 640 aa20.54■□□□□ 0.88
HOXA9-201ENST00000343483 ITGB3BPQ13352 177 aaPredicted RBP20.54■□□□□ 0.88
HOXA9-201ENST00000343483 BAATQ14032 418 aaPredicted RBP20.54■□□□□ 0.88
HOXA9-201ENST00000343483 FBXO38Q6PIJ6 1188 aa20.54■□□□□ 0.88
HOXA9-201ENST00000343483 RETREG2Q8NC44 543 aa20.54■□□□□ 0.88
HOXA9-201ENST00000343483 REPS2Q8NFH8 660 aa20.54■□□□□ 0.88
HOXA9-201ENST00000343483 CEP63Q96MT8 703 aa20.54■□□□□ 0.88
HOXA9-201ENST00000343483 DNAJC7Q99615 494 aa20.54■□□□□ 0.88
HOXA9-201ENST00000343483 BCAS3Q9H6U6 928 aa20.54■□□□□ 0.88
HOXA9-201ENST00000343483 AGPAT5Q9NUQ2 364 aa20.54■□□□□ 0.88
HOXA9-201ENST00000343483 AFG3L2Q9Y4W6 797 aa20.54■□□□□ 0.88
HOXA9-201ENST00000343483 SAMM50Q9Y512 469 aa20.54■□□□□ 0.88
HOXA9-201ENST00000343483 SPDYE4A6NLX3 237 aa20.54■□□□□ 0.88
HOXA9-201ENST00000343483 FAM13AO94988 1023 aa20.54■□□□□ 0.88
HOXA9-201ENST00000343483 MUTP22033 750 aa20.54■□□□□ 0.88
HOXA9-201ENST00000343483 CBX1P83916 185 aa20.54■□□□□ 0.88
HOXA9-201ENST00000343483 C1orf186Q6ZWK4 172 aa20.54■□□□□ 0.88
HOXA9-201ENST00000343483 DCPSQ96C86 337 aaKnown RBP20.54■□□□□ 0.88
HOXA9-201ENST00000343483 PDCD2LQ9BRP1 358 aa20.54■□□□□ 0.88
HOXA9-201ENST00000343483 CARD6Q9BX69 1037 aa20.54■□□□□ 0.88
HOXA9-201ENST00000343483 TTYH3Q9C0H2 523 aa20.54■□□□□ 0.88
HOXA9-201ENST00000343483 ADM5C9JUS6 153 aa20.53■□□□□ 0.88
HOXA9-201ENST00000343483 DHX15O43143 795 aaKnown RBP20.53■□□□□ 0.88
HOXA9-201ENST00000343483 GCNT3O95395 438 aa20.53■□□□□ 0.88
HOXA9-201ENST00000343483 VGLL4Q14135 290 aa20.53■□□□□ 0.88
HOXA9-201ENST00000343483 TMEM132BQ14DG7 1078 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms