RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 KIF5BP33176 963 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 SNX1Q13596 522 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 KCNK18Q7Z418 384 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 DYDC1Q8WWB3 177 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 FMO2Q99518 471 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 SPATS2LQ9NUQ6 558 aaKnown RBP16.22■□□□□ 0.19
CLCN1-201ENST00000343257 ANAPC4Q9UJX5 808 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 ZBTB1Q9Y2K1 713 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 LMTK3Q96Q04 1460 aa16.21■□□□□ 0.19
CLCN1-201ENST00000343257 FER1L4A9Z1Z3 1794 aa16.21■□□□□ 0.19
CLCN1-201ENST00000343257 GHRP10912 638 aa16.21■□□□□ 0.19
CLCN1-201ENST00000343257 ADCY1Q08828 1119 aa16.21■□□□□ 0.19
CLCN1-201ENST00000343257 GRIK3Q13003 919 aa16.21■□□□□ 0.19
CLCN1-201ENST00000343257 ZNF571Q7Z3V5 609 aaPredicted RBP16.21■□□□□ 0.19
CLCN1-201ENST00000343257 SLC17A8Q8NDX2 589 aa16.21■□□□□ 0.19
CLCN1-201ENST00000343257 DDX12PQ92771 950 aa16.21■□□□□ 0.19
CLCN1-201ENST00000343257 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.21■□□□□ 0.19
CLCN1-201ENST00000343257 NOP53Q9NZM5 478 aaKnown RBP16.21■□□□□ 0.19
CLCN1-201ENST00000343257 PNMA3Q9UL41 463 aa16.21■□□□□ 0.19
CLCN1-201ENST00000343257 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.21■□□□□ 0.19
CLCN1-201ENST00000343257 TNS3Q68CZ2 1445 aa16.21■□□□□ 0.19
CLCN1-201ENST00000343257 SRRM3A6NNA2 597 aaPredicted RBP16.21■□□□□ 0.19
CLCN1-201ENST00000343257 CYTH3O43739 400 aa16.21■□□□□ 0.19
CLCN1-201ENST00000343257 USP11P51784 963 aa16.21■□□□□ 0.19
CLCN1-201ENST00000343257 INHBEP58166 350 aa16.21■□□□□ 0.19
CLCN1-201ENST00000343257 LLGL1Q15334 1064 aa16.21■□□□□ 0.19
CLCN1-201ENST00000343257 SAAL1Q96ER3 474 aa16.21■□□□□ 0.19
CLCN1-201ENST00000343257 ZNF317Q96PQ6 595 aaPredicted RBP16.21■□□□□ 0.19
CLCN1-201ENST00000343257 EBF2Q9HAK2 575 aa16.21■□□□□ 0.19
CLCN1-201ENST00000343257 BLOC1S4Q9NUP1 217 aa16.21■□□□□ 0.19
CLCN1-201ENST00000343257 COL4A3BPQ9Y5P4 624 aa16.21■□□□□ 0.19
CLCN1-201ENST00000343257 ADAMTS7Q9UKP4 1686 aa16.21■□□□□ 0.19
CLCN1-201ENST00000343257 RGS16O15492 202 aaPredicted RBP16.2■□□□□ 0.18
CLCN1-201ENST00000343257 EVI5O60447 810 aa16.2■□□□□ 0.18
CLCN1-201ENST00000343257 FGFR1OPO95684 399 aaKnown RBP16.2■□□□□ 0.18
CLCN1-201ENST00000343257 USP17L8P0C7I0 530 aa16.2■□□□□ 0.18
CLCN1-201ENST00000343257 SLC9A1P19634 815 aa16.2■□□□□ 0.18
CLCN1-201ENST00000343257 CALRP27797 417 aaKnown RBP16.2■□□□□ 0.18
CLCN1-201ENST00000343257 SLC8A3P57103 927 aa16.2■□□□□ 0.18
CLCN1-201ENST00000343257 CHRNDQ07001 517 aa16.2■□□□□ 0.18
CLCN1-201ENST00000343257 GRB10Q13322 594 aa16.2■□□□□ 0.18
CLCN1-201ENST00000343257 SOGA3Q5TF21 947 aa16.2■□□□□ 0.18
CLCN1-201ENST00000343257 MYH7BA7E2Y1 1941 aa16.2■□□□□ 0.18
CLCN1-201ENST00000343257 NQO1P15559 274 aaKnown RBP16.2■□□□□ 0.18
CLCN1-201ENST00000343257 RCSD1Q6JBY9 416 aa16.2■□□□□ 0.18
CLCN1-201ENST00000343257 C3orf20Q8ND61 904 aa16.2■□□□□ 0.18
CLCN1-201ENST00000343257 EPS8L3Q8TE67 593 aaKnown RBP16.2■□□□□ 0.18
CLCN1-201ENST00000343257 LARP4BQ92615 738 aaKnown RBP16.2■□□□□ 0.18
CLCN1-201ENST00000343257 KLHL29Q96CT2 875 aa16.2■□□□□ 0.18
CLCN1-201ENST00000343257 NPHP3-ACAD11A0A0J9YXS1 232 aa16.2■□□□□ 0.18
CLCN1-201ENST00000343257 ERVV-2B6SEH9 535 aa16.2■□□□□ 0.18
CLCN1-201ENST00000343257 STARD3NLO95772 234 aa16.2■□□□□ 0.18
CLCN1-201ENST00000343257 KRT16P08779 473 aa16.2■□□□□ 0.18
CLCN1-201ENST00000343257 ARMC9Q7Z3E5 817 aa16.2■□□□□ 0.18
CLCN1-201ENST00000343257 CCDC26Q8TAB7 109 aa16.2■□□□□ 0.18
CLCN1-201ENST00000343257 TBCKQ8TEA7 893 aa16.2■□□□□ 0.18
CLCN1-201ENST00000343257 MCM9Q9NXL9 1143 aa16.2■□□□□ 0.18
CLCN1-201ENST00000343257 PCDH11XQ9BZA7 1347 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 PCDH11YQ9BZA8 1340 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 KIF1AQ12756 1690 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 BAZ2AQ9UIF9 1905 aaKnown RBP16.19■□□□□ 0.18
CLCN1-201ENST00000343257 RBAK-RBAKDNI3L0D1 243 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 PAEPP09466 180 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 IGHMBP2P38935 993 aaKnown RBP16.19■□□□□ 0.18
CLCN1-201ENST00000343257 SLC29A2Q14542 456 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 AADACL2Q6P093 401 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 ALKBH5Q6P6C2 394 aaKnown RBP16.19■□□□□ 0.18
CLCN1-201ENST00000343257 UNC13DQ70J99 1090 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 CCDC25Q86WR0 208 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 MAB21L3Q8N8X9 362 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 ANKRD42Q8N9B4 389 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 ZNF384Q8TF68 577 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 IQCDQ96DY2 449 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 SLC12A4Q9UP95 1085 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 SMCO2A6NFE2 343 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 ABCB4P21439 1286 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 FGFR4P22455 802 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 MAP2K1Q02750 393 aaPredicted RBP16.19■□□□□ 0.18
CLCN1-201ENST00000343257 PBKQ96KB5 322 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 PNMA5Q96PV4 448 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 ZMYND12Q9H0C1 365 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 FGFR1OP2Q9NVK5 253 aa16.19■□□□□ 0.18
CLCN1-201ENST00000343257 KRT13P13646 458 aa16.18■□□□□ 0.18
CLCN1-201ENST00000343257 NCALDP61601 193 aa16.18■□□□□ 0.18
CLCN1-201ENST00000343257 GNPTABQ3T906 1256 aa16.18■□□□□ 0.18
CLCN1-201ENST00000343257 AP1ARQ63HQ0 302 aa16.18■□□□□ 0.18
CLCN1-201ENST00000343257 GJB7Q6PEY0 223 aa16.18■□□□□ 0.18
CLCN1-201ENST00000343257 MYOCDQ8IZQ8 938 aa16.18■□□□□ 0.18
CLCN1-201ENST00000343257 SNX29Q8TEQ0 813 aa16.18■□□□□ 0.18
CLCN1-201ENST00000343257 U2AF1L4Q8WU68 220 aaKnown RBP16.18■□□□□ 0.18
CLCN1-201ENST00000343257 RNF25Q96BH1 459 aaPredicted RBP16.18■□□□□ 0.18
CLCN1-201ENST00000343257 L3MBTL3Q96JM7 780 aaPredicted RBP16.18■□□□□ 0.18
CLCN1-201ENST00000343257 RTCBQ9Y3I0 505 aaKnown RBP16.18■□□□□ 0.18
CLCN1-201ENST00000343257 STXBP3O00186 592 aa16.18■□□□□ 0.18
CLCN1-201ENST00000343257 SUSD4Q5VX71 490 aa16.18■□□□□ 0.18
CLCN1-201ENST00000343257 DENND2CQ68D51 928 aa16.18■□□□□ 0.18
CLCN1-201ENST00000343257 GUF1Q8N442 669 aaKnown RBP16.18■□□□□ 0.18
CLCN1-201ENST00000343257 SLC44A5Q8NCS7 719 aa16.18■□□□□ 0.18
CLCN1-201ENST00000343257 GDAP1Q8TB36 358 aa16.18■□□□□ 0.18
CLCN1-201ENST00000343257 ATXN2LQ8WWM7 1075 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms