RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 MEIS2O14770 477 aa10.87□□□□□ -0.67
UBE2D3-203ENST00000343106 HSF2BPO75031 334 aa10.87□□□□□ -0.67
UBE2D3-203ENST00000343106 GNA14O95837 355 aa10.87□□□□□ -0.67
UBE2D3-203ENST00000343106 FAM86B2P0C5J1 330 aa10.87□□□□□ -0.67
UBE2D3-203ENST00000343106 ATP1A2P50993 1020 aa10.87□□□□□ -0.67
UBE2D3-203ENST00000343106 EPHB4P54760 987 aa10.87□□□□□ -0.67
UBE2D3-203ENST00000343106 ARHGAP4P98171 946 aa10.87□□□□□ -0.67
UBE2D3-203ENST00000343106 GIT2Q14161 759 aa10.87□□□□□ -0.67
UBE2D3-203ENST00000343106 GJB7Q6PEY0 223 aa10.87□□□□□ -0.67
UBE2D3-203ENST00000343106 ZNF571Q7Z3V5 609 aaPredicted RBP10.87□□□□□ -0.67
UBE2D3-203ENST00000343106 SP8Q8IXZ3 490 aa10.87□□□□□ -0.67
UBE2D3-203ENST00000343106 PIGOQ8TEQ8 1089 aa10.87□□□□□ -0.67
UBE2D3-203ENST00000343106 CCDC43Q96MW1 224 aaKnown RBP10.87□□□□□ -0.67
UBE2D3-203ENST00000343106 REEP2Q9BRK0 252 aa10.87□□□□□ -0.67
UBE2D3-203ENST00000343106 EDEM3Q9BZQ6 932 aa10.87□□□□□ -0.67
UBE2D3-203ENST00000343106 RASSF4Q9H2L5 321 aa10.87□□□□□ -0.67
UBE2D3-203ENST00000343106 RGL1Q9NZL6 768 aa10.87□□□□□ -0.67
UBE2D3-203ENST00000343106 GRID2IPA4D2P6 1211 aa10.86□□□□□ -0.67
UBE2D3-203ENST00000343106 POLRMTO00411 1230 aaKnown RBP10.86□□□□□ -0.67
UBE2D3-203ENST00000343106 HOXA10P31260 410 aaPredicted RBP10.86□□□□□ -0.67
UBE2D3-203ENST00000343106 ZNF76P36508 570 aa10.86□□□□□ -0.67
UBE2D3-203ENST00000343106 CASP4P49662 377 aa10.86□□□□□ -0.67
UBE2D3-203ENST00000343106 IRAK1P51617 712 aa10.86□□□□□ -0.67
UBE2D3-203ENST00000343106 ZNF572Q7Z3I7 529 aaPredicted RBP10.86□□□□□ -0.67
UBE2D3-203ENST00000343106 NUCKS1Q9H1E3 243 aaKnown RBP10.86□□□□□ -0.67
UBE2D3-203ENST00000343106 BHMT2Q9H2M3 363 aa10.86□□□□□ -0.67
UBE2D3-203ENST00000343106 LUC7LQ9NQ29 371 aaKnown RBP10.86□□□□□ -0.67
UBE2D3-203ENST00000343106 ARMCX3Q9UH62 379 aaPredicted RBP10.86□□□□□ -0.67
UBE2D3-203ENST00000343106 PCDHB13Q9Y5F0 798 aa10.86□□□□□ -0.67
UBE2D3-203ENST00000343106 PLIN4Q96Q06 1357 aa10.86□□□□□ -0.67
UBE2D3-203ENST00000343106 RBAK-RBAKDNI3L0D1 243 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 ZBTB39O15060 712 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 CHMP2AO43633 222 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 RPS6KA5O75582 802 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 AKAP3O75969 853 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 GCNT3O95395 438 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 HOXD13P35453 343 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 CRKP46108 304 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 CCT5P48643 541 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 USP11P51784 963 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 GNGT1P63211 74 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 TTMPQ5BVD1 217 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 HYIQ5T013 277 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 KSR1Q8IVT5 923 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 IFT20Q8IY31 132 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 ZIM3Q96PE6 472 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 CRAMP1Q96RY5 1269 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 AP1M1Q9BXS5 423 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 CAPS2Q9BXY5 557 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 CCDC88AQ3V6T2 1871 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 SPDYE3A6NKU9 549 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 F5H6K3 240 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 SPATA31C1P0DKV0 1188 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 UCHL3P15374 230 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 POLD1P28340 1107 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 ITIH3Q06033 890 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 KLRC3Q07444 240 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 EXOC3L4Q17RC7 722 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 KNOP1Q1ED39 458 aaKnown RBP10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 MEI1Q5TIA1 1274 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 MEX3CQ5U5Q3 659 aaKnown RBP10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 IRF2BP2Q7Z5L9 587 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 SEPT12Q8IYM1 358 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 SLFN12Q8IYM2 578 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 TAF4BQ92750 862 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 SYN2Q92777 582 aaPredicted RBP10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 GANQ9H2C0 597 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 CENPHQ9H3R5 247 aa10.85□□□□□ -0.67
UBE2D3-203ENST00000343106 TMCO5BA8MYB1 307 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 CEP104O60308 925 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 ZEB2O60315 1214 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 PPFIA4O75335 1185 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 AFPP02771 609 aaKnown RBP10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 XRCC5P13010 732 aaKnown RBP10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 ADRA2BP18089 450 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 PON1P27169 355 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 UBXN2AP68543 259 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 ICA1Q05084 483 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 CTTNQ14247 550 aaKnown RBP10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 RPS6KA1Q15418 735 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 EMBQ6PCB8 327 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 SIAH1Q8IUQ4 282 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 ETNPPLQ8TBG4 499 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 RBM46Q8TBY0 533 aaKnown RBP10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 BCAS4Q8TDM0 211 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 CASKIN2Q8WXE0 1202 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 BBXQ8WY36 941 aaPredicted RBP10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 GJD4Q96KN9 370 aaPredicted RBP10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 RUSC1Q9BVN2 902 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 AIPL1Q9NZN9 384 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 AJAP1Q9UKB5 411 aaPredicted RBP10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 MAST2Q6P0Q8 1798 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 RAD51CO43502 376 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 OPA1O60313 960 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 SPIRE1Q08AE8 756 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 HLTFQ14527 1009 aaKnown RBP eCLIP10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 CFAP58Q5T655 872 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 ALKBH5Q6P6C2 394 aaKnown RBP10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 FBXO11Q86XK2 927 aa10.84□□□□□ -0.67
UBE2D3-203ENST00000343106 TPH2Q8IWU9 490 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms