RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 PTK2Q05397 1052 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 TBC1D9BQ66K14 1250 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 COG1Q8WTW3 980 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 FAM114A2Q9NRY5 505 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 TBK1Q9UHD2 729 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 PTPRMP28827 1452 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 MAPK4P31152 587 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 FMR1Q06787 632 aaKnown RBP eCLIP8.73□□□□□ -1.014e-6■■□□□ 13.4
UBE4B-202ENST00000343090 DBN1Q16643 649 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 RABL6Q3YEC7 729 aaPredicted RBP8.73□□□□□ -1.01
UBE4B-202ENST00000343090 NCAPG2Q86XI2 1143 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 SUGP1Q8IWZ8 645 aaKnown RBP8.73□□□□□ -1.01
UBE4B-202ENST00000343090 ADGRG1Q9Y653 693 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 SYNJ2BP-COX16A0A087WUM0 186 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 TTC26A0AVF1 554 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 EIF3HO15372 352 aaKnown RBP eCLIP8.73□□□□□ -1.01
UBE4B-202ENST00000343090 PFDN1O60925 122 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 TMEM191BP0C7N4 346 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 STAT2P52630 851 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 USP14P54578 494 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 LGSNQ5TDP6 509 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 RASIP1Q5U651 963 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 NLRP14Q86W24 1093 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 P3H4Q92791 437 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 HPS3Q969F9 1004 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 THOC1Q96FV9 657 aaKnown RBP8.73□□□□□ -1.01
UBE4B-202ENST00000343090 CEP95Q96GE4 821 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 FAM167BQ9BTA0 163 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 COX16Q9P0S2 106 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 NOVA2Q9UNW9 492 aaKnown RBP8.73□□□□□ -1.01
UBE4B-202ENST00000343090 CD2APQ9Y5K6 639 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 PPRC1Q5VV67 1664 aaKnown RBP8.73□□□□□ -1.01
UBE4B-202ENST00000343090 RFX7Q2KHR2 1363 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 TNNC2P02585 160 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 LRRC63Q05C16 580 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 SGO2Q562F6 1265 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 ALKBH5Q6P6C2 394 aaKnown RBP8.73□□□□□ -1.01
UBE4B-202ENST00000343090 SESTD1Q86VW0 696 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 ZBTB8OSQ8IWT0 167 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 NLGN1Q8N2Q7 840 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 PRPF38AQ8NAV1 312 aaKnown RBP8.73□□□□□ -1.01
UBE4B-202ENST00000343090 ACCSQ96QU6 501 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 NACC1Q96RE7 527 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 PARVGQ9HBI0 331 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 KMT5AQ9NQR1 393 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 SEPT10Q9P0V9 454 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 USH1CQ9Y6N9 552 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 WDR19Q8NEZ3 1342 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 USP17L10C9JJH3 530 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 TXNDC9O14530 226 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 TROVE2P10155 538 aaKnown RBP eCLIP8.73□□□□□ -1.01
UBE4B-202ENST00000343090 FCER1AP12319 257 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 DYNLT1P63172 113 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 PSMD2Q13200 908 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 TAF12Q16514 161 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 GADL1Q6ZQY3 521 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.73□□□□□ -1.01
UBE4B-202ENST00000343090 SH3GLB2Q9NR46 395 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 HAUS2Q9NVX0 235 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 FBXO2Q9UK22 296 aaPredicted RBP8.73□□□□□ -1.01
UBE4B-202ENST00000343090 USP31Q70CQ4 1352 aa8.73□□□□□ -1.01
UBE4B-202ENST00000343090 CDHR2Q9BYE9 1310 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 ESYT3A0FGR9 886 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 GOLGA8SH3BPF8 625 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 SGK1O00141 431 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 CRCPO75575 148 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 IRAK1P51617 712 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 TNFAIP1Q13829 316 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 HADHQ16836 314 aaKnown RBP8.72□□□□□ -1.01
UBE4B-202ENST00000343090 NFRKBQ6P4R8 1299 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 UNC13DQ70J99 1090 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 CEP170P1Q96L14 293 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 hCG_1984214I3L0E3 225 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 STAT3P40763 770 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 TPD52P55327 224 aaPredicted RBP8.72□□□□□ -1.01
UBE4B-202ENST00000343090 NKX1-1Q15270 411 aaPredicted RBP8.72□□□□□ -1.01
UBE4B-202ENST00000343090 SFR1Q86XK3 245 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 ZNF713Q8N859 430 aaPredicted RBP8.72□□□□□ -1.01
UBE4B-202ENST00000343090 AS3MTQ9HBK9 375 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 PACSIN2Q9UNF0 486 aaPredicted RBP8.72□□□□□ -1.01
UBE4B-202ENST00000343090 CTNND1O60716 968 aaKnown RBP8.72□□□□□ -1.01
UBE4B-202ENST00000343090 CTDNEP1O95476 244 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 ANTXR2P58335 489 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 NBPF9Q3BBW0 867 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 USP49Q70CQ1 688 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 SRBD1Q8N5C6 995 aaKnown RBP8.72□□□□□ -1.01
UBE4B-202ENST00000343090 HVCN1Q96D96 273 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 HOOK2Q96ED9 719 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 PNKPQ96T60 521 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 VIPAS39Q9H9C1 493 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 PI4KBQ9UBF8 816 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 HPCAL4Q9UM19 191 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 NOD1Q9Y239 953 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 POTEB3A0JP26 581 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 POTECB2RU33 542 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 FDPSP14324 419 aaKnown RBP8.72□□□□□ -1.01
UBE4B-202ENST00000343090 EIF2AK2P19525 551 aaKnown RBP8.72□□□□□ -1.01
UBE4B-202ENST00000343090 PHBP35232 272 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 SNX16P57768 344 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 YWHAGP61981 247 aaKnown RBP eCLIP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms