RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 TMEM119Q4V9L6 283 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 NEK8Q86SG6 692 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 ANKS4BQ8N8V4 417 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 PGM2Q96G03 612 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 MTMR9Q96QG7 549 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 ADAM7Q9H2U9 754 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 EPB41L4BQ9H329 900 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 BCCIPQ9P287 314 aaKnown RBP eCLIP10.56□□□□□ -0.72
HOXA1-201ENST00000343060 SUCLA2Q9P2R7 463 aaPredicted RBP10.56□□□□□ -0.72
HOXA1-201ENST00000343060 ROBO3Q96MS0 1386 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 A0A0A6YYK5 440 aaPredicted RBP10.56□□□□□ -0.72
HOXA1-201ENST00000343060 TSPY2A6NKD2 308 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 NEBLO76041 1014 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 ADAMTS2O95450 1211 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 IL6STP40189 918 aaPredicted RBP10.56□□□□□ -0.72
HOXA1-201ENST00000343060 RAPGEF1Q13905 1077 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 SEPT2Q15019 361 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 DPY19L2P1Q6NXN4 242 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 HEATR3Q7Z4Q2 680 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 TPCN2Q8NHX9 752 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 CCDC26Q8TAB7 109 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 RAD54LQ92698 747 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 STAMBPL1Q96FJ0 436 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 SLC4A9Q96Q91 983 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 CRNKL1Q9BZJ0 848 aaKnown RBP10.56□□□□□ -0.72
HOXA1-201ENST00000343060 TANGO6Q9C0B7 1094 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 LRRC27Q9C0I9 530 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 DDX47Q9H0S4 455 aaKnown RBP10.56□□□□□ -0.72
HOXA1-201ENST00000343060 LRRC4CQ9HCJ2 640 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 IL17RBQ9NRM6 502 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 ADAMTS1Q9UHI8 967 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 CCNT1O60563 726 aaKnown RBP10.55□□□□□ -0.72
HOXA1-201ENST00000343060 BUB1BO60566 1050 aaPredicted RBP10.55□□□□□ -0.72
HOXA1-201ENST00000343060 CTNND1O60716 968 aaKnown RBP10.55□□□□□ -0.72
HOXA1-201ENST00000343060 CALRP27797 417 aaKnown RBP10.55□□□□□ -0.72
HOXA1-201ENST00000343060 TECP42680 631 aa10.55□□□□□ -0.72
HOXA1-201ENST00000343060 DHX9Q08211 1270 aaKnown RBP10.55□□□□□ -0.72
HOXA1-201ENST00000343060 PPP1R7Q15435 360 aa10.55□□□□□ -0.72
HOXA1-201ENST00000343060 LETM2Q2VYF4 491 aa10.55□□□□□ -0.72
HOXA1-201ENST00000343060 SUSD4Q5VX71 490 aa10.55□□□□□ -0.72
HOXA1-201ENST00000343060 DZIP3Q86Y13 1208 aaKnown RBP10.55□□□□□ -0.72
HOXA1-201ENST00000343060 MYOCDQ8IZQ8 938 aa10.55□□□□□ -0.72
HOXA1-201ENST00000343060 NSUN4Q96CB9 384 aaKnown RBP10.55□□□□□ -0.72
HOXA1-201ENST00000343060 LZTS2Q9BRK4 669 aa10.55□□□□□ -0.72
HOXA1-201ENST00000343060 SPZ1Q9BXG8 430 aa10.55□□□□□ -0.72
HOXA1-201ENST00000343060 PALM3A6NDB9 673 aaPredicted RBP10.55□□□□□ -0.72
HOXA1-201ENST00000343060 KRIT1O00522 736 aa10.55□□□□□ -0.72
HOXA1-201ENST00000343060 PPP1R12BO60237 982 aaPredicted RBP10.55□□□□□ -0.72
HOXA1-201ENST00000343060 CYP2D6P10635 497 aa10.55□□□□□ -0.72
HOXA1-201ENST00000343060 PRKCIP41743 596 aa10.55□□□□□ -0.72
HOXA1-201ENST00000343060 NPEPPSP55786 919 aa10.55□□□□□ -0.72
HOXA1-201ENST00000343060 ICA1Q05084 483 aa10.55□□□□□ -0.72
HOXA1-201ENST00000343060 NAA25Q14CX7 972 aa10.55□□□□□ -0.72
HOXA1-201ENST00000343060 CDCA2Q69YH5 1023 aaPredicted RBP10.55□□□□□ -0.72
HOXA1-201ENST00000343060 IRF2BP2Q7Z5L9 587 aa10.55□□□□□ -0.72
HOXA1-201ENST00000343060 FAM133AQ8N9E0 248 aa10.55□□□□□ -0.72
HOXA1-201ENST00000343060 NSMCE1Q8WV22 266 aa10.55□□□□□ -0.72
HOXA1-201ENST00000343060 AP1M1Q9BXS5 423 aa10.55□□□□□ -0.72
HOXA1-201ENST00000343060 BAIAP2L1Q9UHR4 511 aa10.55□□□□□ -0.72
HOXA1-201ENST00000343060 PNMA2Q9UL42 364 aa10.55□□□□□ -0.72
HOXA1-201ENST00000343060 BZW2Q9Y6E2 419 aaKnown RBP10.55□□□□□ -0.72
HOXA1-201ENST00000343060 ABCA3Q99758 1704 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 LIN7AO14910 233 aaPredicted RBP10.54□□□□□ -0.72
HOXA1-201ENST00000343060 CAND2O75155 1236 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 ATP2C2O75185 946 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 OAS1P00973 400 aaKnown RBP10.54□□□□□ -0.72
HOXA1-201ENST00000343060 MMEP08473 750 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 ITGA4P13612 1032 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 CHN1P15882 459 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 MKRN4PQ13434 485 aaPredicted RBP10.54□□□□□ -0.72
HOXA1-201ENST00000343060 UBE4AQ14139 1066 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 GLIS3Q8NEA6 775 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 MDM1Q8TC05 714 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 DNAJC19Q96DA6 116 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 FMO2Q99518 471 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.54□□□□□ -0.72
HOXA1-201ENST00000343060 ZDHHC18Q9NUE0 388 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 AMACRQ9UHK6 382 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 INTUQ9ULD6 942 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 BCL9O00512 1426 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 ESYT2A0FGR8 921 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 TTI1O43156 1089 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 IBSPP21815 317 aaPredicted RBP10.54□□□□□ -0.72
HOXA1-201ENST00000343060 GYG1P46976 350 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 PTK2Q05397 1052 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 MYO1EQ12965 1108 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 COASYQ13057 564 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 TNFAIP8L3Q5GJ75 292 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 DYMQ7RTS9 669 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 TRPM8Q7Z2W7 1104 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 ZNF571Q7Z3V5 609 aaPredicted RBP10.54□□□□□ -0.72
HOXA1-201ENST00000343060 DDX12PQ92771 950 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 CNKSR1Q969H4 720 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 HES6Q96HZ4 224 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 TMEM109Q9BVC6 243 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 MOV10L1Q9BXT6 1211 aaKnown RBP10.54□□□□□ -0.72
HOXA1-201ENST00000343060 NAGPAQ9UK23 515 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 TRPC6Q9Y210 931 aa10.54□□□□□ -0.72
HOXA1-201ENST00000343060 UTP11Q9Y3A2 253 aaKnown RBP10.54□□□□□ -0.72
HOXA1-201ENST00000343060 PPP2R5EQ16537 467 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms