RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 PACSIN1Q9BY11 444 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 ADAM33Q9BZ11 813 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 VPS37BQ9H9H4 285 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 POC1B-GALNT4F8VUJ3 575 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 THAP12O43422 761 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 SESN3P58005 492 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 DR1Q01658 176 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 ZRSR2Q15696 482 aaKnown RBP13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 NLRP14Q86W24 1093 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 FBXL16Q8N461 479 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 ARHGEF2Q92974 986 aaKnown RBP13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 PDS5AQ29RF7 1337 aaKnown RBP13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 A0A087X0T9 212 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 TARSL2A2RTX5 802 aaKnown RBP13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 RCCD1A6NED2 376 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 EIF3HO15372 352 aaKnown RBP eCLIP13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 FAM228BP0C875 321 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 AKR1B1P15121 316 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 ATF7P17544 494 aaPredicted RBP13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 RNPC3Q96LT9 517 aaKnown RBP13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 CCT8L2Q96SF2 557 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 AMNQ9BXJ7 453 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 ANO3Q9BYT9 981 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 RNF14Q9UBS8 474 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 PHF20L1A8MW92 1017 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 STXBP3O00186 592 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 ATP2A1O14983 1001 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 TTI1O43156 1089 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 RAD51CO43502 376 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 PPP1R37O75864 691 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 TNNI1P19237 187 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 NFIXQ14938 502 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 TRIM51Q9BSJ1 452 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 HOMER3Q9NSC5 361 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 PSD3Q9NYI0 1048 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 LOC102724159A0A0B4J2E5 919 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 PVALEFA0A1B0GWK0 134 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 HMGB1P1B2RPK0 211 aaPredicted RBP13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 TCP10L2B9ZVM9 353 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 FGFR2P21802 821 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 ATP11AP98196 1134 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 ITPK1Q13572 414 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 PWP2Q15269 919 aaKnown RBP13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 FAM102BQ5T8I3 360 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 SLFN12Q8IYM2 578 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 RGL1Q9NZL6 768 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 PLAGL2Q9UPG8 496 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 NT5DC1Q5TFE4 455 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 PPP4R3AQ6IN85 833 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 GJB7Q6PEY0 223 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 USP37Q86T82 979 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 ATP6V1G3Q96LB4 118 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 TAF1DQ9H5J8 278 aaPredicted RBP13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 DNAJC12Q9UKB3 198 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 BZW2Q9Y6E2 419 aaKnown RBP13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 PNMA6FA0A0J9YX94 578 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 FERP16591 822 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 PSMC2P35998 433 aaKnown RBP13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 MYL7Q01449 175 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 CDC37Q16543 378 aaPredicted RBP13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 HP1BP3Q5SSJ5 553 aaPredicted RBP13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 VIPAS39Q9H9C1 493 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 LEMD3Q9Y2U8 911 aa13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 NOC2LQ9Y3T9 749 aaKnown RBP13.5□□□□□ -0.25
SNRNP48-201ENST00000342415 CAMTA2O94983 1202 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 LSP1P33241 339 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 GPATCH4Q5T3I0 446 aaKnown RBP13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 WDR93Q6P2C0 686 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 C3orf67Q6ZVT6 689 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 ADGRF4Q8IZF3 695 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 N4BP2L2Q92802 583 aaPredicted RBP13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 MTMR8Q96EF0 704 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 IFT74Q96LB3 600 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 IMPG2Q9BZV3 1241 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 SEMA6BQ9H3T3 888 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 CD209Q9NNX6 404 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 IFT172Q9UG01 1749 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 CLRN2A0PK11 232 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 GMNCA6NCL1 334 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 SLC37A4O43826 429 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 GAS8O95995 478 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 MMEP08473 750 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 CORO7P57737 925 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 PSMD2Q13200 908 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 NKX1-1Q15270 411 aaPredicted RBP13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 NUGGCQ68CJ6 796 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 CCDC13Q8IYE1 715 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 NEK9Q8TD19 979 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 KIFAP3Q92845 792 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 ZNF653Q96CK0 615 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 PBKQ96KB5 322 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 DNAJC7Q99615 494 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 LBHD1Q9BQE6 289 aaPredicted RBP13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 ZMYND12Q9H0C1 365 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 TESPA1A2RU30 521 aaPredicted RBP13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 GLI1P08151 1106 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 WDR44Q5JSH3 913 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 LRP10Q7Z4F1 713 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 RNF10Q8N5U6 811 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms