RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 TMED8Q6PL24 325 aaPredicted RBP13.02□□□□□ -0.33
CDH5-201ENST00000341529 GLYCTKQ8IVS8 523 aa13.02□□□□□ -0.33
CDH5-201ENST00000341529 ZNF526Q8TF50 670 aaPredicted RBP13.02□□□□□ -0.33
CDH5-201ENST00000341529 LRRC1Q9BTT6 524 aa13.02□□□□□ -0.33
CDH5-201ENST00000341529 AZI2Q9H6S1 392 aa13.02□□□□□ -0.33
CDH5-201ENST00000341529 CD2APQ9Y5K6 639 aa13.02□□□□□ -0.33
CDH5-201ENST00000341529 SLC37A4O43826 429 aa13.02□□□□□ -0.33
CDH5-201ENST00000341529 NR3C1P04150 777 aa13.02□□□□□ -0.33
CDH5-201ENST00000341529 PDHBP11177 359 aa13.02□□□□□ -0.33
CDH5-201ENST00000341529 CD58P19256 250 aa13.02□□□□□ -0.33
CDH5-201ENST00000341529 NF2P35240 595 aa13.02□□□□□ -0.33
CDH5-201ENST00000341529 MKRN3Q13064 507 aaKnown RBP13.02□□□□□ -0.33
CDH5-201ENST00000341529 ZRSR2Q15696 482 aaKnown RBP13.02□□□□□ -0.33
CDH5-201ENST00000341529 GRIK5Q16478 980 aa13.02□□□□□ -0.33
CDH5-201ENST00000341529 LIN9Q5TKA1 542 aa13.02□□□□□ -0.33
CDH5-201ENST00000341529 OTUD6AQ7L8S5 288 aa13.02□□□□□ -0.33
CDH5-201ENST00000341529 NCAPG2Q86XI2 1143 aa13.02□□□□□ -0.33
CDH5-201ENST00000341529 TACO1Q9BSH4 297 aaKnown RBP13.02□□□□□ -0.33
CDH5-201ENST00000341529 C1orf112Q9NSG2 853 aa13.02□□□□□ -0.33
CDH5-201ENST00000341529 DNAJC12Q9UKB3 198 aa13.02□□□□□ -0.33
CDH5-201ENST00000341529 FAM184BQ9ULE4 1060 aa13.02□□□□□ -0.33
CDH5-201ENST00000341529 SNX24Q9Y343 169 aa13.02□□□□□ -0.33
CDH5-201ENST00000341529 RRP15Q9Y3B9 282 aaKnown RBP13.02□□□□□ -0.33
CDH5-201ENST00000341529 FER1L4A9Z1Z3 1794 aa13.02□□□□□ -0.33
CDH5-201ENST00000341529 ITSN1Q15811 1721 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 ECE2O60344 883 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 MYL1P05976 194 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 NPR1P16066 1061 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 MXI1P50539 228 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 POLGP54098 1239 aaPredicted RBP13.01□□□□□ -0.33
CDH5-201ENST00000341529 PMS1P54277 932 aaKnown RBP13.01□□□□□ -0.33
CDH5-201ENST00000341529 ERVK-24P63145 666 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 ZNF772Q68DY9 489 aaPredicted RBP13.01□□□□□ -0.33
CDH5-201ENST00000341529 GOLGA8SH3BPF8 625 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 PGRMC1O00264 195 aaKnown RBP13.01□□□□□ -0.33
CDH5-201ENST00000341529 MAP3K9P80192 1104 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 DMP1Q13316 513 aaPredicted RBP13.01□□□□□ -0.33
CDH5-201ENST00000341529 SCYL2Q6P3W7 929 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 B4GALNT4Q76KP1 1039 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 SH2D3CQ8N5H7 860 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 NACC1Q96RE7 527 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 DHX36Q9H2U1 1008 aaKnown RBP13.01□□□□□ -0.33
CDH5-201ENST00000341529 JCADQ9P266 1359 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 REREQ9P2R6 1566 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 WNT7AO00755 349 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 CTIFO43310 598 aaKnown RBP13.01□□□□□ -0.33
CDH5-201ENST00000341529 BMP6P22004 513 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 MARK3P27448 753 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 RCAN1P53805 252 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 IRX3P78415 501 aaPredicted RBP13.01□□□□□ -0.33
CDH5-201ENST00000341529 LMBRD2Q68DH5 695 aaPredicted RBP13.01□□□□□ -0.33
CDH5-201ENST00000341529 TMEM179Q6ZVK1 233 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.01□□□□□ -0.33
CDH5-201ENST00000341529 OSBPL9Q96SU4 736 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 LACRTQ9GZZ8 138 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 MLXIPLQ9NP71 852 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 NOVA2Q9UNW9 492 aaKnown RBP13.01□□□□□ -0.33
CDH5-201ENST00000341529 STK38LQ9Y2H1 464 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 DAAM1Q9Y4D1 1078 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 KIF20BQ96Q89 1820 aa13.01□□□□□ -0.33
CDH5-201ENST00000341529 OVOS2A0A0G2JMS6 1433 aa13□□□□□ -0.33
CDH5-201ENST00000341529 PDE6CP51160 858 aa13□□□□□ -0.33
CDH5-201ENST00000341529 DYNLT1P63172 113 aa13□□□□□ -0.33
CDH5-201ENST00000341529 CTAGE3PQ8IX95 158 aa13□□□□□ -0.33
CDH5-201ENST00000341529 SAAL1Q96ER3 474 aa13□□□□□ -0.33
CDH5-201ENST00000341529 THOC1Q96FV9 657 aaKnown RBP13□□□□□ -0.33
CDH5-201ENST00000341529 MTA3Q9BTC8 594 aa13□□□□□ -0.33
CDH5-201ENST00000341529 MAK16Q9BXY0 300 aaKnown RBP13□□□□□ -0.33
CDH5-201ENST00000341529 CCSER1Q9C0I3 900 aa13□□□□□ -0.33
CDH5-201ENST00000341529 RAB17Q9H0T7 212 aa13□□□□□ -0.33
CDH5-201ENST00000341529 STIM2Q9P246 746 aa13□□□□□ -0.33
CDH5-201ENST00000341529 MORC2Q9Y6X9 1032 aaPredicted RBP13□□□□□ -0.33
CDH5-201ENST00000341529 SLC16A4O15374 487 aa13□□□□□ -0.33
CDH5-201ENST00000341529 SLC9A1P19634 815 aa13□□□□□ -0.33
CDH5-201ENST00000341529 EPHB4P54760 987 aa13□□□□□ -0.33
CDH5-201ENST00000341529 APBA1Q02410 837 aa13□□□□□ -0.33
CDH5-201ENST00000341529 PASD1Q8IV76 773 aa13□□□□□ -0.33
CDH5-201ENST00000341529 GUF1Q8N442 669 aaKnown RBP13□□□□□ -0.33
CDH5-201ENST00000341529 SUPT20HQ8NEM7 779 aa13□□□□□ -0.33
CDH5-201ENST00000341529 NKX2-3Q8TAU0 364 aa13□□□□□ -0.33
CDH5-201ENST00000341529 GOLGA5Q8TBA6 731 aa13□□□□□ -0.33
CDH5-201ENST00000341529 HAUS1Q96CS2 278 aa13□□□□□ -0.33
CDH5-201ENST00000341529 ZNF148Q9UQR1 794 aa13□□□□□ -0.33
CDH5-201ENST00000341529 TRPC6Q9Y210 931 aa13□□□□□ -0.33
CDH5-201ENST00000341529 MYO1FO00160 1098 aa13□□□□□ -0.33
CDH5-201ENST00000341529 ZSCAN20P17040 1043 aaPredicted RBP13□□□□□ -0.33
CDH5-201ENST00000341529 ZNF543Q08ER8 600 aa13□□□□□ -0.33
CDH5-201ENST00000341529 ZC2HC1CQ53FD0 456 aaPredicted RBP13□□□□□ -0.33
CDH5-201ENST00000341529 ZBTB33Q86T24 672 aa13□□□□□ -0.33
CDH5-201ENST00000341529 HEMGNQ9BXL5 484 aa13□□□□□ -0.33
CDH5-201ENST00000341529 ADAM33Q9BZ11 813 aa13□□□□□ -0.33
CDH5-201ENST00000341529 KMT5AQ9NQR1 393 aa13□□□□□ -0.33
CDH5-201ENST00000341529 NXF1Q9UBU9 619 aaKnown RBP13□□□□□ -0.33
CDH5-201ENST00000341529 TTLL3Q9Y4R7 772 aa13□□□□□ -0.33
CDH5-201ENST00000341529 POC1B-GALNT4F8VUJ3 575 aa12.99□□□□□ -0.33
CDH5-201ENST00000341529 FERP16591 822 aa12.99□□□□□ -0.33
CDH5-201ENST00000341529 RASA3Q14644 834 aa12.99□□□□□ -0.33
CDH5-201ENST00000341529 GADL1Q6ZQY3 521 aa12.99□□□□□ -0.33
CDH5-201ENST00000341529 MAD2L2Q9UI95 211 aa12.99□□□□□ -0.33
CDH5-201ENST00000341529 DCAF8L1A6NGE4 600 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms