RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 PDRG1Q9NUG6 133 aa11.77□□□□□ -0.52
TPM3-207ENST00000341372 Q9Y3F1 56 aa11.77□□□□□ -0.52
TPM3-207ENST00000341372 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.77□□□□□ -0.53
TPM3-207ENST00000341372 MEIS2O14770 477 aa11.77□□□□□ -0.53
TPM3-207ENST00000341372 CTHP32929 405 aa11.77□□□□□ -0.53
TPM3-207ENST00000341372 ADCYAP1R1P41586 468 aa11.77□□□□□ -0.53
TPM3-207ENST00000341372 WWC2Q6AWC2 1192 aa11.77□□□□□ -0.53
TPM3-207ENST00000341372 IQSEC1Q6DN90 963 aa11.77□□□□□ -0.53
TPM3-207ENST00000341372 PMM1Q92871 262 aa11.77□□□□□ -0.53
TPM3-207ENST00000341372 CRELD1Q96HD1 420 aa11.77□□□□□ -0.53
TPM3-207ENST00000341372 PDGFCQ9NRA1 345 aa11.77□□□□□ -0.53
TPM3-207ENST00000341372 MAGEC2Q9UBF1 373 aaPredicted RBP11.77□□□□□ -0.53
TPM3-207ENST00000341372 LHX6Q9UPM6 363 aa11.77□□□□□ -0.53
TPM3-207ENST00000341372 PHF24Q9UPV7 400 aa11.77□□□□□ -0.53
TPM3-207ENST00000341372 hCG_1642624A0A1W2PR95 340 aa11.76□□□□□ -0.53
TPM3-207ENST00000341372 KBTBD13C9JR72 458 aa11.76□□□□□ -0.53
TPM3-207ENST00000341372 CTAGE5O15320 804 aa11.76□□□□□ -0.53
TPM3-207ENST00000341372 IFNAR1P17181 557 aa11.76□□□□□ -0.53
TPM3-207ENST00000341372 SMPD1P17405 629 aa11.76□□□□□ -0.53
TPM3-207ENST00000341372 GNA15P30679 374 aa11.76□□□□□ -0.53
TPM3-207ENST00000341372 HOXA13P31271 388 aaPredicted RBP11.76□□□□□ -0.53
TPM3-207ENST00000341372 TNFAIP2Q03169 654 aa11.76□□□□□ -0.53
TPM3-207ENST00000341372 SERINC3Q13530 473 aa11.76□□□□□ -0.53
TPM3-207ENST00000341372 ENOX2Q16206 610 aaKnown RBP11.76□□□□□ -0.53
TPM3-207ENST00000341372 GJC2Q5T442 439 aaPredicted RBP11.76□□□□□ -0.53
TPM3-207ENST00000341372 BLOC1S3Q6QNY0 202 aa11.76□□□□□ -0.53
TPM3-207ENST00000341372 EEPD1Q7L9B9 569 aa11.76□□□□□ -0.53
TPM3-207ENST00000341372 RNF180Q86T96 592 aa11.76□□□□□ -0.53
TPM3-207ENST00000341372 PDCD2LQ9BRP1 358 aa11.76□□□□□ -0.53
TPM3-207ENST00000341372 TSEN34Q9BSV6 310 aaKnown RBP11.76□□□□□ -0.53
TPM3-207ENST00000341372 NAP1L2Q9ULW6 460 aaPredicted RBP11.76□□□□□ -0.53
TPM3-207ENST00000341372 PGK1P00558 417 aa11.76□□□□□ -0.53
TPM3-207ENST00000341372 ATF4P18848 351 aaPredicted RBP11.76□□□□□ -0.53
TPM3-207ENST00000341372 PGM5Q15124 567 aa11.76□□□□□ -0.53
TPM3-207ENST00000341372 DUSP28Q4G0W2 176 aa11.76□□□□□ -0.53
TPM3-207ENST00000341372 ARHGEF16Q5VV41 709 aa11.76□□□□□ -0.53
TPM3-207ENST00000341372 ALKBH8Q96BT7 664 aaKnown RBP11.76□□□□□ -0.53
TPM3-207ENST00000341372 RNF26Q9BY78 433 aaPredicted RBP11.76□□□□□ -0.53
TPM3-207ENST00000341372 DDX56Q9NY93 547 aaKnown RBP11.76□□□□□ -0.53
TPM3-207ENST00000341372 MYADML2A6NDP7 307 aa11.75□□□□□ -0.53
TPM3-207ENST00000341372 STXBP3O00186 592 aa11.75□□□□□ -0.53
TPM3-207ENST00000341372 NKRFO15226 690 aaKnown RBP eCLIP11.75□□□□□ -0.53
TPM3-207ENST00000341372 PRPF3O43395 683 aaKnown RBP11.75□□□□□ -0.53
TPM3-207ENST00000341372 NR3C2P08235 984 aa11.75□□□□□ -0.53
TPM3-207ENST00000341372 EIF2AK2P19525 551 aaKnown RBP11.75□□□□□ -0.53
TPM3-207ENST00000341372 SNX17Q15036 470 aa11.75□□□□□ -0.53
TPM3-207ENST00000341372 STXBP2Q15833 593 aa11.75□□□□□ -0.53
TPM3-207ENST00000341372 PKN1Q16512 942 aa11.75□□□□□ -0.53
TPM3-207ENST00000341372 PFKFB3Q16875 520 aaPredicted RBP11.75□□□□□ -0.53
TPM3-207ENST00000341372 HEATR3Q7Z4Q2 680 aa11.75□□□□□ -0.53
TPM3-207ENST00000341372 TLK2Q86UE8 772 aa11.75□□□□□ -0.53
TPM3-207ENST00000341372 SCFD2Q8WU76 684 aa11.75□□□□□ -0.53
TPM3-207ENST00000341372 GPKOWQ92917 476 aaPredicted RBP eCLIP11.75□□□□□ -0.531e-12■□□□□ 9.1
TPM3-207ENST00000341372 RNPC3Q96LT9 517 aaKnown RBP11.75□□□□□ -0.53
TPM3-207ENST00000341372 BARHL2Q9NY43 387 aa11.75□□□□□ -0.53
TPM3-207ENST00000341372 V9GY48 417 aaPredicted RBP11.75□□□□□ -0.53
TPM3-207ENST00000341372 ESYT2A0FGR8 921 aa11.74□□□□□ -0.53
TPM3-207ENST00000341372 EIF3JO75822 258 aaKnown RBP11.74□□□□□ -0.53
TPM3-207ENST00000341372 AK2P54819 239 aa11.74□□□□□ -0.53
TPM3-207ENST00000341372 ANKRD1Q15327 319 aa11.74□□□□□ -0.53
TPM3-207ENST00000341372 C1orf53Q5VUE5 145 aa11.74□□□□□ -0.53
TPM3-207ENST00000341372 CCDC62Q6P9F0 684 aa11.74□□□□□ -0.53
TPM3-207ENST00000341372 VSIG10LQ86VR7 867 aa11.74□□□□□ -0.53
TPM3-207ENST00000341372 IL31RAQ8NI17 732 aa11.74□□□□□ -0.53
TPM3-207ENST00000341372 WDR11Q9BZH6 1224 aa11.74□□□□□ -0.53
TPM3-207ENST00000341372 NIF3L1Q9GZT8 377 aa11.74□□□□□ -0.53
TPM3-207ENST00000341372 PSTPIP2Q9H939 334 aa11.74□□□□□ -0.53
TPM3-207ENST00000341372 SPC25Q9HBM1 224 aa11.74□□□□□ -0.53
TPM3-207ENST00000341372 DNAJC6O75061 913 aa11.74□□□□□ -0.53
TPM3-207ENST00000341372 SCG2P13521 617 aa11.74□□□□□ -0.53
TPM3-207ENST00000341372 CCT2P78371 535 aaKnown RBP11.74□□□□□ -0.53
TPM3-207ENST00000341372 TMEM63BQ5T3F8 832 aa11.74□□□□□ -0.53
TPM3-207ENST00000341372 USP17L6PQ6QN14 398 aa11.74□□□□□ -0.53
TPM3-207ENST00000341372 SMARCC2Q8TAQ2 1214 aa11.74□□□□□ -0.53
TPM3-207ENST00000341372 CUL5Q93034 780 aa11.74□□□□□ -0.53
TPM3-207ENST00000341372 KIF2CQ99661 725 aa11.74□□□□□ -0.53
TPM3-207ENST00000341372 SENP6Q9GZR1 1112 aaPredicted RBP11.74□□□□□ -0.53
TPM3-207ENST00000341372 NCOA5Q9HCD5 579 aaKnown RBP11.74□□□□□ -0.53
TPM3-207ENST00000341372 RIC8AQ9NPQ8 531 aa11.74□□□□□ -0.53
TPM3-207ENST00000341372 TPCN1Q9ULQ1 816 aa11.74□□□□□ -0.53
TPM3-207ENST00000341372 A0A1W2PQ45 241 aaPredicted RBP11.73□□□□□ -0.53
TPM3-207ENST00000341372 A0A1W2PQY0 241 aa11.73□□□□□ -0.53
TPM3-207ENST00000341372 STAM2O75886 525 aa11.73□□□□□ -0.53
TPM3-207ENST00000341372 RGS20O76081 388 aa11.73□□□□□ -0.53
TPM3-207ENST00000341372 ARIH2O95376 493 aa11.73□□□□□ -0.53
TPM3-207ENST00000341372 C6orf222P0C671 652 aaPredicted RBP11.73□□□□□ -0.53
TPM3-207ENST00000341372 ACLYP53396 1101 aa11.73□□□□□ -0.53
TPM3-207ENST00000341372 NAPAP54920 295 aa11.73□□□□□ -0.53
TPM3-207ENST00000341372 TTLL4Q14679 1199 aa11.73□□□□□ -0.53
TPM3-207ENST00000341372 PTPRNQ16849 979 aa11.73□□□□□ -0.53
TPM3-207ENST00000341372 LRRC26Q2I0M4 334 aa11.73□□□□□ -0.53
TPM3-207ENST00000341372 XRRA1Q6P2D8 792 aa11.73□□□□□ -0.53
TPM3-207ENST00000341372 FCHSD1Q86WN1 690 aa11.73□□□□□ -0.53
TPM3-207ENST00000341372 PCSK9Q8NBP7 692 aaKnown RBP11.73□□□□□ -0.53
TPM3-207ENST00000341372 PHKBQ93100 1093 aa11.73□□□□□ -0.53
TPM3-207ENST00000341372 USB1Q9BQ65 265 aaKnown RBP11.73□□□□□ -0.53
TPM3-207ENST00000341372 GLT8D2Q9H1C3 349 aa11.73□□□□□ -0.53
TPM3-207ENST00000341372 SEPT9Q9UHD8 586 aaPredicted RBP11.73□□□□□ -0.53
TPM3-207ENST00000341372 ESPNB1AK53 854 aa11.72□□□□□ -0.53
TPM3-207ENST00000341372 PFKFB2O60825 505 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms