RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 GANQ9H2C0 597 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 FAM204AQ9H8W3 233 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 KCNQ5Q9NR82 932 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 AIPL1Q9NZN9 384 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 TRAF3IP3Q9Y228 551 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 PCDHAC2Q9Y5I4 1007 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 MYH11P35749 1972 aa16.02■□□□□ 0.16
TDP2-201ENST00000341060 UTRNP46939 3433 aa16.02■□□□□ 0.16
TDP2-201ENST00000341060 F5H6K3 240 aa16.02■□□□□ 0.16
TDP2-201ENST00000341060 BUB1O43683 1085 aa16.02■□□□□ 0.16
TDP2-201ENST00000341060 FOSP01100 380 aaPredicted RBP16.02■□□□□ 0.16
TDP2-201ENST00000341060 SPATA31C1P0DKV0 1188 aa16.02■□□□□ 0.16
TDP2-201ENST00000341060 CAPN2P17655 700 aa16.02■□□□□ 0.16
TDP2-201ENST00000341060 SREBF1P36956 1147 aa16.02■□□□□ 0.16
TDP2-201ENST00000341060 PAFAH1B1P43034 410 aa16.02■□□□□ 0.16
TDP2-201ENST00000341060 CASP5P51878 434 aa16.02■□□□□ 0.16
TDP2-201ENST00000341060 KLRC3Q07444 240 aa16.02■□□□□ 0.16
TDP2-201ENST00000341060 KCNH2Q12809 1159 aa16.02■□□□□ 0.16
TDP2-201ENST00000341060 STRIP1Q5VSL9 837 aa16.02■□□□□ 0.16
TDP2-201ENST00000341060 SYT2Q8N9I0 419 aaPredicted RBP16.02■□□□□ 0.16
TDP2-201ENST00000341060 GMCL1Q96IK5 515 aa16.02■□□□□ 0.16
TDP2-201ENST00000341060 STK24Q9Y6E0 443 aa16.02■□□□□ 0.16
TDP2-201ENST00000341060 LOXHD1Q8IVV2 1947 aa16.02■□□□□ 0.15
TDP2-201ENST00000341060 FAM86B1E9PN63 330 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 NCK2O43639 380 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 FAM86B2P0C5J1 330 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 MMP14P50281 582 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 APBA1Q02410 837 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 RAPGEF1Q13905 1077 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 NAB2Q15742 525 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 EPM2AIP1Q7L775 607 aaPredicted RBP16.01■□□□□ 0.15
TDP2-201ENST00000341060 FBXO11Q86XK2 927 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 FAM20AQ96MK3 541 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 GDAP1L1Q96MZ0 367 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 PSMB7Q99436 277 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 TRIM34Q9BYJ4 488 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 ZHX3Q9H4I2 956 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 RNF14Q9UBS8 474 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 DMGDHQ9UI17 866 aaKnown RBP16.01■□□□□ 0.15
TDP2-201ENST00000341060 DNM3Q9UQ16 869 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 A0A0U1RQG5 324 aaPredicted RBP16.01■□□□□ 0.15
TDP2-201ENST00000341060 SPDYE3A6NKU9 549 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 PSMC6P62333 389 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 KNOP1Q1ED39 458 aaKnown RBP16.01■□□□□ 0.15
TDP2-201ENST00000341060 LEKR1Q6ZMV7 388 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 FRMD5Q7Z6J6 570 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 HDAC7Q8WUI4 952 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 TBC1D5Q92609 795 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 REEP2Q9BRK0 252 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 STIM2Q9P246 746 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 PCDHGC5Q9Y5F6 944 aa16.01■□□□□ 0.15
TDP2-201ENST00000341060 CIITAP33076 1130 aa16■□□□□ 0.15
TDP2-201ENST00000341060 NAP1L1P55209 391 aaKnown RBP16■□□□□ 0.15
TDP2-201ENST00000341060 PABPC4Q13310 644 aaKnown RBP eCLIP16■□□□□ 0.158e-7■□□□□ 8.3
TDP2-201ENST00000341060 USH1GQ495M9 461 aa16■□□□□ 0.15
TDP2-201ENST00000341060 DACT2Q5SW24 774 aa16■□□□□ 0.15
TDP2-201ENST00000341060 SFR1Q86XK3 245 aa16■□□□□ 0.15
TDP2-201ENST00000341060 FAM133AQ8N9E0 248 aa16■□□□□ 0.15
TDP2-201ENST00000341060 EHD2Q9NZN4 543 aa16■□□□□ 0.15
TDP2-201ENST00000341060 HDAC9Q9UKV0 1011 aa16■□□□□ 0.15
TDP2-201ENST00000341060 A0A087X0T9 212 aa16■□□□□ 0.15
TDP2-201ENST00000341060 AGPSO00116 658 aa16■□□□□ 0.15
TDP2-201ENST00000341060 PDXKO00764 312 aa16■□□□□ 0.15
TDP2-201ENST00000341060 RPS6KA5O75582 802 aa16■□□□□ 0.15
TDP2-201ENST00000341060 NDUFB10O96000 172 aa16■□□□□ 0.15
TDP2-201ENST00000341060 FAM228BP0C875 321 aa16■□□□□ 0.15
TDP2-201ENST00000341060 KLRC1P26715 233 aa16■□□□□ 0.15
TDP2-201ENST00000341060 TNFRSF8P28908 595 aa16■□□□□ 0.15
TDP2-201ENST00000341060 GGCXP38435 758 aa16■□□□□ 0.15
TDP2-201ENST00000341060 RBM5P52756 815 aaKnown RBP eCLIP16■□□□□ 0.15
TDP2-201ENST00000341060 KLHL30Q0D2K2 578 aa16■□□□□ 0.15
TDP2-201ENST00000341060 ABCB5Q2M3G0 1257 aa16■□□□□ 0.15
TDP2-201ENST00000341060 CFAP221Q4G0U5 840 aa16■□□□□ 0.15
TDP2-201ENST00000341060 SYDE2Q5VT97 1194 aa16■□□□□ 0.15
TDP2-201ENST00000341060 CCDC125Q86Z20 511 aa16■□□□□ 0.15
TDP2-201ENST00000341060 PLCB1Q9NQ66 1216 aa16■□□□□ 0.15
TDP2-201ENST00000341060 SMARCAL1Q9NZC9 954 aa16■□□□□ 0.15
TDP2-201ENST00000341060 CWC15Q9P013 229 aaKnown RBP16■□□□□ 0.15
TDP2-201ENST00000341060 PSME4Q14997 1843 aa16■□□□□ 0.15
TDP2-201ENST00000341060 ATRNL1Q5VV63 1379 aa16■□□□□ 0.15
TDP2-201ENST00000341060 MEIS1O00470 390 aa15.99■□□□□ 0.15
TDP2-201ENST00000341060 OPLAHO14841 1288 aa15.99■□□□□ 0.15
TDP2-201ENST00000341060 MSH4O15457 936 aa15.99■□□□□ 0.15
TDP2-201ENST00000341060 PALMO75781 387 aa15.99■□□□□ 0.15
TDP2-201ENST00000341060 GDF11O95390 407 aa15.99■□□□□ 0.15
TDP2-201ENST00000341060 HOXD13P35453 343 aa15.99■□□□□ 0.15
TDP2-201ENST00000341060 EPHB4P54760 987 aa15.99■□□□□ 0.15
TDP2-201ENST00000341060 ASIC2Q16515 512 aa15.99■□□□□ 0.15
TDP2-201ENST00000341060 BMT2Q1RMZ1 405 aa15.99■□□□□ 0.15
TDP2-201ENST00000341060 GLE1Q53GS7 698 aaKnown RBP15.99■□□□□ 0.15
TDP2-201ENST00000341060 DPY19L2P1Q6NXN4 242 aa15.99■□□□□ 0.15
TDP2-201ENST00000341060 GOLGA6L1Q8N7Z2 621 aa15.99■□□□□ 0.15
TDP2-201ENST00000341060 AFAP1L1Q8TED9 768 aa15.99■□□□□ 0.15
TDP2-201ENST00000341060 RBM12Q9NTZ6 932 aaKnown RBP15.99■□□□□ 0.15
TDP2-201ENST00000341060 ARMCX3Q9UH62 379 aaPredicted RBP15.99■□□□□ 0.15
TDP2-201ENST00000341060 ADAMTS1Q9UHI8 967 aa15.99■□□□□ 0.15
TDP2-201ENST00000341060 SERPINA10Q9UK55 444 aa15.99■□□□□ 0.15
TDP2-201ENST00000341060 VAV3Q9UKW4 847 aa15.99■□□□□ 0.15
TDP2-201ENST00000341060 GOLGA6BA6NDN3 693 aa15.98■□□□□ 0.15
TDP2-201ENST00000341060 CALUO43852 315 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms