RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 DNA2P51530 1060 aa12.95□□□□□ -0.34
C2orf88-201ENST00000340623 PEX3P56589 373 aa12.95□□□□□ -0.34
C2orf88-201ENST00000340623 HS1BP3Q53T59 392 aa12.95□□□□□ -0.34
C2orf88-201ENST00000340623 CT47A1Q5JQC4 288 aaPredicted RBP12.95□□□□□ -0.34
C2orf88-201ENST00000340623 USP37Q86T82 979 aa12.95□□□□□ -0.34
C2orf88-201ENST00000340623 ZNF710Q8N1W2 664 aa12.95□□□□□ -0.34
C2orf88-201ENST00000340623 HPS3Q969F9 1004 aa12.95□□□□□ -0.34
C2orf88-201ENST00000340623 DNAI1Q9UI46 699 aa12.95□□□□□ -0.34
C2orf88-201ENST00000340623 ZNF215Q9UL58 517 aaPredicted RBP12.95□□□□□ -0.34
C2orf88-201ENST00000340623 MYL3P08590 195 aa12.95□□□□□ -0.34
C2orf88-201ENST00000340623 ZNF658Q5TYW1 1059 aaPredicted RBP12.95□□□□□ -0.34
C2orf88-201ENST00000340623 SCFD2Q8WU76 684 aa12.95□□□□□ -0.34
C2orf88-201ENST00000340623 RIT2Q99578 217 aa12.95□□□□□ -0.34
C2orf88-201ENST00000340623 FAM49AQ9H0Q0 323 aaPredicted RBP12.95□□□□□ -0.34
C2orf88-201ENST00000340623 INO80B-WBP1J3KQ70 363 aa12.95□□□□□ -0.34
C2orf88-201ENST00000340623 PRPF6O94906 941 aaKnown RBP12.95□□□□□ -0.34
C2orf88-201ENST00000340623 ADORA2AP29274 412 aa12.95□□□□□ -0.34
C2orf88-201ENST00000340623 FXR2P51116 673 aaKnown RBP eCLIP12.95□□□□□ -0.34
C2orf88-201ENST00000340623 ARID5AQ03989 594 aa12.95□□□□□ -0.34
C2orf88-201ENST00000340623 MFSD14CQ5VZR4 134 aa12.95□□□□□ -0.34
C2orf88-201ENST00000340623 SFR1Q86XK3 245 aa12.95□□□□□ -0.34
C2orf88-201ENST00000340623 RIOX2Q8IUF8 465 aa12.95□□□□□ -0.34
C2orf88-201ENST00000340623 ZBTB8OSQ8IWT0 167 aa12.95□□□□□ -0.34
C2orf88-201ENST00000340623 IL31RAQ8NI17 732 aa12.95□□□□□ -0.34
C2orf88-201ENST00000340623 INO80BQ9C086 356 aaPredicted RBP12.95□□□□□ -0.34
C2orf88-201ENST00000340623 JADE2Q9NQC1 790 aa12.95□□□□□ -0.34
C2orf88-201ENST00000340623 KMT5AQ9NQR1 393 aa12.95□□□□□ -0.34
C2orf88-201ENST00000340623 NPHP3-ACAD11A0A0J9YXS1 232 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 ADAMTS3O15072 1205 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 HOXD10P28358 340 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 SNW1Q13573 536 aaKnown RBP12.94□□□□□ -0.34
C2orf88-201ENST00000340623 DRC1Q96MC2 740 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 FNBP1Q96RU3 617 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 XPO4Q9C0E2 1151 aaKnown RBP12.94□□□□□ -0.34
C2orf88-201ENST00000340623 CYP39A1Q9NYL5 469 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 ZNF112Q9UJU3 913 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 MYH1P12882 1939 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 CLIC2O15247 247 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 PLA2G6O60733 806 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 MYL1P05976 194 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 SRGAP2CP0DJJ0 459 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 MAPK4P31152 587 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 LIG4P49917 911 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 STAT5BP51692 787 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 BIRC3Q13489 604 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 XRRA1Q6P2D8 792 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 LBX2Q6XYB7 198 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 CCDC150Q8NCX0 1101 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 NEK9Q8TD19 979 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 NLRP4Q96MN2 994 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 UNC45AQ9H3U1 944 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.94□□□□□ -0.34
C2orf88-201ENST00000340623 MAP3K20Q9NYL2 800 aaKnown RBP12.94□□□□□ -0.34
C2orf88-201ENST00000340623 PCNX4Q63HM2 1172 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 PLA2G4FQ68DD2 849 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 UNC13DQ70J99 1090 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 OR6J1Q8NGC5 347 aa12.94□□□□□ -0.34
C2orf88-201ENST00000340623 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.94□□□□□ -0.34
C2orf88-201ENST00000340623 COL11A2P13942 1736 aaPredicted RBP12.94□□□□□ -0.34
C2orf88-201ENST00000340623 HNRNPDLO14979 420 aaKnown RBP12.93□□□□□ -0.34
C2orf88-201ENST00000340623 SPATA1Q5VX52 437 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 MOXD1Q6UVY6 613 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 CATSPER3Q86XQ3 398 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 ENGASEQ8NFI3 743 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 SEPT1Q8WYJ6 367 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 GPRASP2Q96D09 838 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 TRIM9Q9C026 710 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 TRIM6Q9C030 488 aaPredicted RBP12.93□□□□□ -0.34
C2orf88-201ENST00000340623 BTBD7Q9P203 1132 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 ANKFY1Q9P2R3 1169 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 ZNF500O60304 480 aaPredicted RBP12.93□□□□□ -0.34
C2orf88-201ENST00000340623 GAP43P17677 238 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 NPEPPSP55786 919 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 GNG11P61952 73 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 ARHGAP29Q52LW3 1261 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 RNF216Q9NWF9 866 aaPredicted RBP12.93□□□□□ -0.34
C2orf88-201ENST00000340623 MYPNQ86TC9 1320 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 A0A0G2JLL6 359 aaPredicted RBP12.93□□□□□ -0.34
C2orf88-201ENST00000340623 M0QZ92 97 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 MED24O75448 989 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 YWHABP31946 246 aaKnown RBP12.93□□□□□ -0.34
C2orf88-201ENST00000340623 GSDMDP57764 484 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 ADAM9Q13443 819 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 ARMCX5Q6P1M9 558 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 PRRT2Q7Z6L0 340 aaPredicted RBP12.93□□□□□ -0.34
C2orf88-201ENST00000340623 P2RX5Q93086 422 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 IWS1Q96ST2 819 aa12.93□□□□□ -0.34
C2orf88-201ENST00000340623 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.93□□□□□ -0.34
C2orf88-201ENST00000340623 MAFGO15525 162 aa12.92□□□□□ -0.34
C2orf88-201ENST00000340623 C6orf222P0C671 652 aaPredicted RBP12.92□□□□□ -0.34
C2orf88-201ENST00000340623 RPA1P27694 616 aa12.92□□□□□ -0.34
C2orf88-201ENST00000340623 ALDH5A1P51649 535 aaPredicted RBP12.92□□□□□ -0.34
C2orf88-201ENST00000340623 FCGRTP55899 365 aa12.92□□□□□ -0.34
C2orf88-201ENST00000340623 NID2Q14112 1375 aa12.92□□□□□ -0.34
C2orf88-201ENST00000340623 KCNV1Q6PIU1 500 aa12.92□□□□□ -0.34
C2orf88-201ENST00000340623 SYT10Q6XYQ8 523 aa12.92□□□□□ -0.34
C2orf88-201ENST00000340623 UBXN4Q92575 508 aa12.92□□□□□ -0.34
C2orf88-201ENST00000340623 PUF60Q9UHX1 559 aaKnown RBP12.92□□□□□ -0.34
C2orf88-201ENST00000340623 KCNJ18B7U540 433 aa12.92□□□□□ -0.34
C2orf88-201ENST00000340623 RIOK3O14730 519 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms