RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 IVLP07476 585 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 SPDYE6P0CI01 402 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 LIG4P49917 911 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 CYP2J2P51589 502 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 MYL7Q01449 175 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 APBA1Q02410 837 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 SURF1Q15526 300 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 KNOP1Q1ED39 458 aaKnown RBP8.3□□□□□ -1.08
HIPK1-201ENST00000340480 FRMD5Q7Z6J6 570 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 LDHDQ86WU2 507 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 MIS12Q9H081 205 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 AMFRQ9UKV5 643 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 PLIN4Q96Q06 1357 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 EIF3CLB5ME19 914 aaKnown RBP8.3□□□□□ -1.08
HIPK1-201ENST00000340480 GFPT2O94808 682 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 GTF2F1P35269 517 aaKnown RBP eCLIP8.3□□□□□ -1.08
HIPK1-201ENST00000340480 SARSP49591 514 aaKnown RBP8.3□□□□□ -1.08
HIPK1-201ENST00000340480 FIGNQ5HY92 759 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 DACT2Q5SW24 774 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 FAM102BQ5T8I3 360 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 CAPZA3Q96KX2 299 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 EIF3CQ99613 913 aaKnown RBP8.3□□□□□ -1.08
HIPK1-201ENST00000340480 A0A1W2PQJ5 194 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 FOXP2O15409 715 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 MFAP3P55082 362 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 RUNDC3BQ96NL0 473 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 MKNK1Q9BUB5 465 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 NACA2Q9H009 215 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 MLXIPQ9HAP2 919 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 CTTNBP2NLQ9P2B4 639 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 PNMA3Q9UL41 463 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 TMX2Q9Y320 296 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 SHMT1P34896 483 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 TRPC3Q13507 836 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 FOXR2Q6PJQ5 311 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 PPP2R3BQ9Y5P8 575 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 ADGRG1Q9Y653 693 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 RHOXF2BP0C7M4 288 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 P4HA1P13674 534 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 QARSP47897 775 aaKnown RBP8.29□□□□□ -1.08
HIPK1-201ENST00000340480 CALCOCO2Q13137 446 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 MTMR1Q13613 665 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 MTMR3Q13615 1198 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 SLFN12LQ6IEE8 588 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 USP49Q70CQ1 688 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 ARMC9Q7Z3E5 817 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 NT5C1BQ96P26 610 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 RHOXF2Q9BQY4 288 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 RNF146Q9NTX7 359 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 N4BP2Q86UW6 1770 aaPredicted RBP8.29□□□□□ -1.08
HIPK1-201ENST00000340480 C5P01031 1676 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 SPOPO43791 374 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 SREBF1P36956 1147 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 PSMC5P62195 406 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 SP4Q02446 784 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 TTBK2Q6IQ55 1244 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 SH3RF1Q7Z6J0 888 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 TMEM60Q9H2L4 133 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 ACAD9Q9H845 621 aa8.29□□□□□ -1.08
HIPK1-201ENST00000340480 SSU72P8A0A1W2PR75 194 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 POTEB3A0JP26 581 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 POTECB2RU33 542 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 IPO5O00410 1097 aaKnown RBP8.28□□□□□ -1.08
HIPK1-201ENST00000340480 HOXA13P31271 388 aaPredicted RBP8.28□□□□□ -1.08
HIPK1-201ENST00000340480 POLGP54098 1239 aaPredicted RBP8.28□□□□□ -1.08
HIPK1-201ENST00000340480 PDXDC2PQ6P474 469 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 POTEBQ6S5H4 581 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 SLC35F6Q8N357 371 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.28□□□□□ -1.08
HIPK1-201ENST00000340480 NSMCE1Q8WV22 266 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 GLG1Q92896 1179 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 HVCN1Q96D96 273 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 FAM212AQ96EL1 285 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 ERGIC2Q96RQ1 377 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 RMDN3Q96TC7 470 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 NHEJ1Q9H9Q4 299 aaPredicted RBP8.28□□□□□ -1.08
HIPK1-201ENST00000340480 LRRC4BQ9NT99 713 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 FAM169AQ9Y6X4 670 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 E9PMD0 336 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 EIF3DO15371 548 aaKnown RBP eCLIP8.28□□□□□ -1.08
HIPK1-201ENST00000340480 STAM2O75886 525 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 NR3C1P04150 777 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 KIF11P52732 1056 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 FMR1Q06787 632 aaKnown RBP eCLIP8.28□□□□□ -1.087e-6■■□□□ 12.8
HIPK1-201ENST00000340480 FUT2Q10981 343 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 LRRC41Q15345 812 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 CDKAL1Q5VV42 579 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 SFR1Q86XK3 245 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 GTF3C2Q8WUA4 911 aaPredicted RBP8.28□□□□□ -1.08
HIPK1-201ENST00000340480 RNF34Q969K3 372 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 RAB17Q9H0T7 212 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 TXNDC16Q9P2K2 825 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 PARP2Q9UGN5 583 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 LCMT1Q9UIC8 334 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 RGPD5Q99666 1765 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 PPP1R3GB7ZBB8 358 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 CNGA1P29973 690 aa8.28□□□□□ -1.08
HIPK1-201ENST00000340480 APOBEC3HQ6NTF7 200 aaKnown RBP8.28□□□□□ -1.08
HIPK1-201ENST00000340480 SMCR8Q8TEV9 937 aaPredicted RBP8.28□□□□□ -1.08
HIPK1-201ENST00000340480 FAM196BA6NMK8 535 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms