RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 KAT2BQ92831 832 aa15.77■□□□□ 0.11
CPSF7-201ENST00000340437 DDX4Q9NQI0 724 aaKnown RBP15.77■□□□□ 0.11
CPSF7-201ENST00000340437 GRIN2DO15399 1336 aa15.77■□□□□ 0.11
CPSF7-201ENST00000340437 GPR75-ASB3A0A0A6YYF3 556 aa15.76■□□□□ 0.11
CPSF7-201ENST00000340437 SSU72P8A0A1W2PR75 194 aa15.76■□□□□ 0.11
CPSF7-201ENST00000340437 TMEM110-MUSTN1A8MSY1 372 aa15.76■□□□□ 0.11
CPSF7-201ENST00000340437 PRLRP16471 622 aa15.76■□□□□ 0.11
CPSF7-201ENST00000340437 EXOC3L4Q17RC7 722 aa15.76■□□□□ 0.11
CPSF7-201ENST00000340437 PIGOQ8TEQ8 1089 aa15.76■□□□□ 0.11
CPSF7-201ENST00000340437 CASZ1Q86V15 1759 aa15.76■□□□□ 0.11
CPSF7-201ENST00000340437 LSP1P33241 339 aa15.76■□□□□ 0.11
CPSF7-201ENST00000340437 RHBDL3P58872 404 aa15.76■□□□□ 0.11
CPSF7-201ENST00000340437 PDIA5Q14554 519 aa15.76■□□□□ 0.11
CPSF7-201ENST00000340437 RNF10Q8N5U6 811 aaKnown RBP15.76■□□□□ 0.11
CPSF7-201ENST00000340437 CHORDC1Q9UHD1 332 aaPredicted RBP15.76■□□□□ 0.11
CPSF7-201ENST00000340437 DAGLAQ9Y4D2 1042 aa15.76■□□□□ 0.11
CPSF7-201ENST00000340437 DAPK3O43293 454 aa15.76■□□□□ 0.11
CPSF7-201ENST00000340437 TTLL1O95922 423 aa15.76■□□□□ 0.11
CPSF7-201ENST00000340437 PLCG2P16885 1265 aa15.76■□□□□ 0.11
CPSF7-201ENST00000340437 IFFO1Q0D2I5 559 aa15.76■□□□□ 0.11
CPSF7-201ENST00000340437 PSMD2Q13200 908 aa15.76■□□□□ 0.11
CPSF7-201ENST00000340437 A0A1B0GUL6 1792 aa15.76■□□□□ 0.11
CPSF7-201ENST00000340437 CYP11B2P19099 503 aa15.75■□□□□ 0.11
CPSF7-201ENST00000340437 HDLBPQ00341 1268 aaKnown RBP15.75■□□□□ 0.11
CPSF7-201ENST00000340437 ARHGAP44Q17R89 818 aa15.75■□□□□ 0.11
CPSF7-201ENST00000340437 GBP6Q6ZN66 633 aa15.75■□□□□ 0.11
CPSF7-201ENST00000340437 IQCDQ96DY2 449 aa15.75■□□□□ 0.11
CPSF7-201ENST00000340437 POLLQ9UGP5 575 aa15.75■□□□□ 0.11
CPSF7-201ENST00000340437 ARAP2Q8WZ64 1704 aa15.75■□□□□ 0.11
CPSF7-201ENST00000340437 PJA2O43164 708 aa15.75■□□□□ 0.11
CPSF7-201ENST00000340437 XRCC5P13010 732 aaKnown RBP15.75■□□□□ 0.11
CPSF7-201ENST00000340437 ERVK-9P63128 1117 aa15.75■□□□□ 0.11
CPSF7-201ENST00000340437 TBC1D10BQ4KMP7 808 aaPredicted RBP15.75■□□□□ 0.11
CPSF7-201ENST00000340437 ASPRV1Q53RT3 343 aa15.75■□□□□ 0.11
CPSF7-201ENST00000340437 USP38Q8NB14 1042 aa15.75■□□□□ 0.11
CPSF7-201ENST00000340437 BHMT2Q9H2M3 363 aa15.75■□□□□ 0.11
CPSF7-201ENST00000340437 TSKSQ9UJT2 592 aa15.75■□□□□ 0.11
CPSF7-201ENST00000340437 FLT3P36888 993 aa15.75■□□□□ 0.11
CPSF7-201ENST00000340437 ZNF543Q08ER8 600 aa15.75■□□□□ 0.11
CPSF7-201ENST00000340437 ZNF211Q13398 564 aaPredicted RBP15.75■□□□□ 0.11
CPSF7-201ENST00000340437 MEI1Q5TIA1 1274 aa15.75■□□□□ 0.11
CPSF7-201ENST00000340437 DOT1LQ8TEK3 1739 aa15.75■□□□□ 0.11
CPSF7-201ENST00000340437 RGL1Q9NZL6 768 aa15.75■□□□□ 0.11
CPSF7-201ENST00000340437 SERPINB13Q9UIV8 391 aa15.75■□□□□ 0.11
CPSF7-201ENST00000340437 GCOM1H8Y6P7 765 aaPredicted RBP15.74■□□□□ 0.11
CPSF7-201ENST00000340437 SART1O43290 800 aaKnown RBP15.74■□□□□ 0.11
CPSF7-201ENST00000340437 MYZAPP0CAP1 466 aa15.74■□□□□ 0.11
CPSF7-201ENST00000340437 USP8P40818 1118 aa15.74■□□□□ 0.11
CPSF7-201ENST00000340437 QRICH1Q2TAL8 776 aa15.74■□□□□ 0.11
CPSF7-201ENST00000340437 TRIM59Q8IWR1 403 aa15.74■□□□□ 0.11
CPSF7-201ENST00000340437 SPICE1Q8N0Z3 855 aa15.74■□□□□ 0.11
CPSF7-201ENST00000340437 NOVA2Q9UNW9 492 aaKnown RBP15.74■□□□□ 0.11
CPSF7-201ENST00000340437 SHOX2O60902 331 aaPredicted RBP15.74■□□□□ 0.11
CPSF7-201ENST00000340437 UCHL3P15374 230 aa15.74■□□□□ 0.11
CPSF7-201ENST00000340437 CDC37Q16543 378 aaPredicted RBP15.74■□□□□ 0.11
CPSF7-201ENST00000340437 TMEM119Q4V9L6 283 aa15.74■□□□□ 0.11
CPSF7-201ENST00000340437 CYP2W1Q8TAV3 490 aa15.74■□□□□ 0.11
CPSF7-201ENST00000340437 NT5C3AQ9H0P0 336 aa15.74■□□□□ 0.11
CPSF7-201ENST00000340437 EFCC1Q9HA90 598 aa15.74■□□□□ 0.11
CPSF7-201ENST00000340437 KIF4AO95239 1232 aa15.74■□□□□ 0.11
CPSF7-201ENST00000340437 LCA5LO95447 670 aa15.74■□□□□ 0.11
CPSF7-201ENST00000340437 CCDC113Q9H0I3 377 aa15.74■□□□□ 0.11
CPSF7-201ENST00000340437 PKD2L1Q9P0L9 805 aa15.74■□□□□ 0.11
CPSF7-201ENST00000340437 DNM3Q9UQ16 869 aa15.74■□□□□ 0.11
CPSF7-201ENST00000340437 TTI1O43156 1089 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 PROM2Q8N271 834 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 METTL13Q8N6R0 699 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 SH3GL2Q99962 352 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 TRIM51Q9BSJ1 452 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 GDF3Q9NR23 364 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 GCNT4Q9P109 453 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 FBXL5Q9UKA1 691 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 ATP8A1Q9Y2Q0 1164 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 PCDHAC2Q9Y5I4 1007 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 SNED1Q8TER0 1413 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 SPATA31A5Q5VU36 1347 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 SPATA31A7Q8IWB4 1347 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 ZBTB39O15060 712 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 ZBTB5O15062 677 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 TBCAO75347 108 aaKnown RBP15.73■□□□□ 0.11
CPSF7-201ENST00000340437 GDF11O95390 407 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 CYP2J2P51589 502 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 KRT71Q3SY84 523 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 CATSPER3Q86XQ3 398 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 TPH2Q8IWU9 490 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 ZFPM1Q8IX07 1006 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 IQCKQ8N0W5 287 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 CAVIN3Q969G5 261 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 ATP6V1G3Q96LB4 118 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 CCT8L2Q96SF2 557 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 REEP2Q9BRK0 252 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 ANO3Q9BYT9 981 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 NEUROG2Q9H2A3 272 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 OSGEPQ9NPF4 335 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 NOC2LQ9Y3T9 749 aaKnown RBP15.73■□□□□ 0.11
CPSF7-201ENST00000340437 AFPP02771 609 aaKnown RBP15.73■□□□□ 0.11
CPSF7-201ENST00000340437 HSD17B3P37058 310 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 NFIAQ12857 509 aa15.73■□□□□ 0.11
CPSF7-201ENST00000340437 CTTNQ14247 550 aaKnown RBP15.73■□□□□ 0.11
CPSF7-201ENST00000340437 GLYCTKQ8IVS8 523 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms