RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 LHX8Q68G74 356 aa20.05■□□□□ 0.8
SDCBP2-201ENST00000339987 CATSPER3Q86XQ3 398 aa20.05■□□□□ 0.8
SDCBP2-201ENST00000339987 CCDC60Q8IWA6 550 aaPredicted RBP20.05■□□□□ 0.8
SDCBP2-201ENST00000339987 AFAP1L1Q8TED9 768 aa20.05■□□□□ 0.8
SDCBP2-201ENST00000339987 ATP6V0A1Q93050 837 aa20.05■□□□□ 0.8
SDCBP2-201ENST00000339987 CALML4Q96GE6 196 aa20.05■□□□□ 0.8
SDCBP2-201ENST00000339987 ZNF333Q96JL9 665 aa20.05■□□□□ 0.8
SDCBP2-201ENST00000339987 XPNPEP3Q9NQH7 507 aa20.05■□□□□ 0.8
SDCBP2-201ENST00000339987 RGL1Q9NZL6 768 aa20.05■□□□□ 0.8
SDCBP2-201ENST00000339987 IGSF9BQ9UPX0 1349 aa20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 DKC1O60832 514 aaKnown RBP eCLIP20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 ADAMTS4O75173 837 aa20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 LYPLA2O95372 231 aa20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 CCL5P13501 91 aa20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 CST5P28325 142 aaPredicted RBP20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 QARSP47897 775 aaKnown RBP20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 PSMC5P62195 406 aa20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 FSCN1Q16658 493 aaKnown RBP20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 DGKDQ16760 1214 aa20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 TMEM119Q4V9L6 283 aa20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 FAM160B1Q5W0V3 765 aa20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 SWSAP1Q6NVH7 229 aa20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 PCYT2Q99447 389 aa20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 PYM1Q9BRP8 204 aaKnown RBP20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 LXNQ9BS40 222 aa20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 NT5C3AQ9H0P0 336 aa20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 GOLPH3LQ9H4A5 285 aa20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 ZSWIM4Q9H7M6 989 aa20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 GABBR1Q9UBS5 961 aa20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 CCDC39Q9UFE4 941 aa20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 KCNH3Q9ULD8 1083 aa20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 WDR81Q562E7 1941 aa20.04■□□□□ 0.8
SDCBP2-201ENST00000339987 FRMPD3Q5JV73 1810 aa20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 A0A1B0GVL5 298 aa20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 POTEB3A0JP26 581 aa20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 BACH1O14867 736 aa20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 KPNA6O60684 536 aa20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 LGALS2P05162 132 aa20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 C6orf222P0C671 652 aaPredicted RBP20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 CYP4A11Q02928 519 aa20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 GRB10Q13322 594 aa20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 KARSQ15046 597 aaKnown RBP20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 MTFR1Q15390 333 aa20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 POTEBQ6S5H4 581 aa20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 CCDC73Q6ZRK6 1079 aa20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 PLPPR4Q7Z2D5 763 aa20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 BANK1Q8NDB2 785 aa20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 KLHDC9Q8NEP7 349 aa20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 CDK5RAP3Q96JB5 506 aa20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 PNMA5Q96PV4 448 aa20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 AZI2Q9H6S1 392 aa20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 ZNF302Q9NR11 478 aa20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 MAFBQ9Y5Q3 323 aaPredicted RBP20.03■□□□□ 0.8
SDCBP2-201ENST00000339987 PGK1P00558 417 aa20.02■□□□□ 0.8
SDCBP2-201ENST00000339987 SLC26A2P50443 739 aa20.02■□□□□ 0.8
SDCBP2-201ENST00000339987 STAT5BP51692 787 aa20.02■□□□□ 0.8
SDCBP2-201ENST00000339987 NDUFA8P51970 172 aa20.02■□□□□ 0.8
SDCBP2-201ENST00000339987 FAM160A1Q05DH4 1040 aa20.02■□□□□ 0.8
SDCBP2-201ENST00000339987 CTTNQ14247 550 aaKnown RBP20.02■□□□□ 0.8
SDCBP2-201ENST00000339987 UGCGQ16739 394 aa20.02■□□□□ 0.8
SDCBP2-201ENST00000339987 TPRNQ4KMQ1 711 aa20.02■□□□□ 0.8
SDCBP2-201ENST00000339987 C4orf19Q8IY42 314 aa20.02■□□□□ 0.8
SDCBP2-201ENST00000339987 RASSF8Q8NHQ8 419 aa20.02■□□□□ 0.8
SDCBP2-201ENST00000339987 SMARCAD1Q9H4L7 1026 aa20.02■□□□□ 0.8
SDCBP2-201ENST00000339987 A0A087X0B3 334 aa20.02■□□□□ 0.79
SDCBP2-201ENST00000339987 MYADML2A6NDP7 307 aa20.02■□□□□ 0.79
SDCBP2-201ENST00000339987 ZEB2O60315 1214 aa20.02■□□□□ 0.79
SDCBP2-201ENST00000339987 PLCG1P19174 1290 aa20.02■□□□□ 0.79
SDCBP2-201ENST00000339987 SYKP43405 635 aa20.02■□□□□ 0.79
SDCBP2-201ENST00000339987 ECM1Q16610 540 aa20.02■□□□□ 0.79
SDCBP2-201ENST00000339987 UTP14CQ5TAP6 766 aaKnown RBP20.02■□□□□ 0.79
SDCBP2-201ENST00000339987 PDXDC2PQ6P474 469 aa20.02■□□□□ 0.79
SDCBP2-201ENST00000339987 TPH2Q8IWU9 490 aa20.02■□□□□ 0.79
SDCBP2-201ENST00000339987 ENGASEQ8NFI3 743 aa20.02■□□□□ 0.79
SDCBP2-201ENST00000339987 RNF208Q9H0X6 261 aa20.02■□□□□ 0.79
SDCBP2-201ENST00000339987 WRAP73Q9P2S5 460 aaPredicted RBP20.02■□□□□ 0.79
SDCBP2-201ENST00000339987 USP25Q9UHP3 1055 aa20.02■□□□□ 0.79
SDCBP2-201ENST00000339987 KIAA1024Q9UPX6 916 aa20.02■□□□□ 0.79
SDCBP2-201ENST00000339987 ZNF862O60290 1169 aa20.01■□□□□ 0.79
SDCBP2-201ENST00000339987 LIG1P18858 919 aa20.01■□□□□ 0.79
SDCBP2-201ENST00000339987 IRX5P78411 483 aaPredicted RBP20.01■□□□□ 0.79
SDCBP2-201ENST00000339987 BEX3Q00994 111 aa20.01■□□□□ 0.79
SDCBP2-201ENST00000339987 ZRSR1Q15695 479 aaKnown RBP20.01■□□□□ 0.79
SDCBP2-201ENST00000339987 E2F4Q16254 413 aa20.01■□□□□ 0.79
SDCBP2-201ENST00000339987 GNASQ5JWF2 1037 aa20.01■□□□□ 0.79
SDCBP2-201ENST00000339987 RRAGBQ5VZM2 374 aa20.01■□□□□ 0.79
SDCBP2-201ENST00000339987 CCSAPQ6IQ19 270 aaPredicted RBP20.01■□□□□ 0.79
SDCBP2-201ENST00000339987 POTEGQ6S5H5 508 aa20.01■□□□□ 0.79
SDCBP2-201ENST00000339987 RNF180Q86T96 592 aa20.01■□□□□ 0.79
SDCBP2-201ENST00000339987 FMR1NBQ8N0W7 255 aaPredicted RBP20.01■□□□□ 0.79
SDCBP2-201ENST00000339987 IQUBQ8NA54 791 aa20.01■□□□□ 0.79
SDCBP2-201ENST00000339987 GLG1Q92896 1179 aa20.01■□□□□ 0.79
SDCBP2-201ENST00000339987 C16orf70Q9BSU1 422 aa20.01■□□□□ 0.79
SDCBP2-201ENST00000339987 MCOLN1Q9GZU1 580 aa20.01■□□□□ 0.79
SDCBP2-201ENST00000339987 DDX19AQ9NUU7 478 aaKnown RBP20.01■□□□□ 0.79
SDCBP2-201ENST00000339987 STK17AQ9UEE5 414 aa20.01■□□□□ 0.79
SDCBP2-201ENST00000339987 MYH9P35579 1960 aaKnown RBP20■□□□□ 0.79
SDCBP2-201ENST00000339987 POLR2DO15514 142 aaKnown RBP20■□□□□ 0.79
SDCBP2-201ENST00000339987 STBD1O95210 358 aa20■□□□□ 0.79
SDCBP2-201ENST00000339987 MBD3O95983 291 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms