RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CFAP157Q5JU67 520 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 TMEM214Q6NUQ4 689 aaKnown RBP10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 RFWD3Q6PCD5 774 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 APLFQ8IW19 511 aaPredicted RBP10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 RBBP8NLQ8NC74 664 aaPredicted RBP10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 IFT74Q96LB3 600 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 MAP3K14Q99558 947 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 TLR10Q9BXR5 811 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 INTS9Q9NV88 658 aaKnown RBP10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 HAO1Q9UJM8 370 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 DOLKQ9UPQ8 538 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 LRCH1Q9Y2L9 728 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 A0A087X0B3 334 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 KLF18A0A0U1RQI7 1052 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 TRIM49BA6NDI0 452 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 KCNJ18B7U540 433 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 GSTA2P09210 222 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 KCNJ12Q14500 433 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 EAPPQ56P03 285 aaPredicted RBP10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 SYDE2Q5VT97 1194 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 TYW1BQ6NUM6 668 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 TRIM67Q6ZTA4 783 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 TREML1Q86YW5 311 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 ZNF713Q8N859 430 aaPredicted RBP10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 PDCD7Q8N8D1 485 aaKnown RBP10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 PCMTD1Q96MG8 357 aaPredicted RBP10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 CTAGE1Q96RT6 745 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 KRT23Q9C075 422 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 DPH5Q9H2P9 285 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 ADAM7Q9H2U9 754 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 CABP1Q9NZU7 370 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 ATP8A1Q9Y2Q0 1164 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 TCP11X1B4DZS4 312 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 MGAT5Q09328 741 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 SNX30Q5VWJ9 437 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 RFX8Q6ZV50 586 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 KRT27Q7Z3Y8 459 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 SLC7A5P1Q8MH63 180 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 PLVAPQ9BX97 442 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 IVNS1ABPQ9Y6Y0 642 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 SIGLEC16A6NMB1 481 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 PPP1R3GB7ZBB8 358 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 KRT36O76013 467 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 VAV1P15498 845 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 ERCC5P28715 1186 aaPredicted RBP10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 CYLC1P35663 651 aaPredicted RBP10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 PRKCIP41743 596 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 HALP42357 657 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 ZNF131P52739 623 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 LIN52Q52LA3 116 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 SOGA3Q5TF21 947 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 LRRC8BQ6P9F7 803 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 OTUD6AQ7L8S5 288 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 MTMR8Q96EF0 704 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 UBAC1Q9BSL1 405 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 OSBPL10Q9BXB5 764 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 AP1M1Q9BXS5 423 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 IFIH1Q9BYX4 1025 aaKnown RBP10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 DENND2DQ9H6A0 471 aaPredicted RBP10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 AZI2Q9H6S1 392 aa10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 USP15Q9Y4E8 981 aaPredicted RBP10.48□□□□□ -0.73
PTCHD4-201ENST00000339488 ZNF609O15014 1411 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 ACTN4O43707 911 aaKnown RBP10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 AFPP02771 609 aaKnown RBP10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 LYNP07948 512 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 RCN1Q15293 331 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 GPR162Q16538 588 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 KHDC1Q4VXA5 237 aaKnown RBP10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 USPL1Q5W0Q7 1092 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 LRIG3Q6UXM1 1119 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 GDAP1Q8TB36 358 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 LRRC8CQ8TDW0 803 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 PURBQ96QR8 312 aaKnown RBP10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 GOLPH3Q9H4A6 298 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 SH2D4AQ9H788 454 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 RBMX2Q9Y388 322 aaKnown RBP10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 SLC4A7Q9Y6M7 1214 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 NRXN3Q9Y4C0 1643 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 E7EWF7 191 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 DAPK3O43293 454 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 TCP1P17987 556 aaKnown RBP10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 CD97P48960 835 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 GFPT1Q06210 699 aaPredicted RBP10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 KRT40Q6A162 431 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 ZNF572Q7Z3I7 529 aaPredicted RBP10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 SATL1Q86VE3 508 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 NME9Q86XW9 330 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 KRI1Q8N9T8 703 aaKnown RBP10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 ATP8B4Q8TF62 1192 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 NAT14Q8WUY8 206 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 GATA6Q92908 595 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 HAPLN3Q96S86 360 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 ALG1Q9BT22 464 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 TSC22D4Q9Y3Q8 395 aa10.47□□□□□ -0.73
PTCHD4-201ENST00000339488 HIP1O00291 1037 aa10.46□□□□□ -0.73
PTCHD4-201ENST00000339488 PPP6R2O75170 966 aa10.46□□□□□ -0.73
PTCHD4-201ENST00000339488 PDGFRBP09619 1106 aa10.46□□□□□ -0.73
PTCHD4-201ENST00000339488 TRIM21P19474 475 aaKnown RBP10.46□□□□□ -0.73
PTCHD4-201ENST00000339488 NLRP5P59047 1200 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms