RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 GRIPAP1Q4V328 841 aa9□□□□□ -0.97
HPS4-201ENST00000336873 EPC2Q52LR7 807 aa9□□□□□ -0.97
HPS4-201ENST00000336873 CCDC105Q8IYK2 499 aa9□□□□□ -0.97
HPS4-201ENST00000336873 AK8Q96MA6 479 aa9□□□□□ -0.97
HPS4-201ENST00000336873 PPP1R16BQ96T49 567 aa9□□□□□ -0.97
HPS4-201ENST00000336873 NT5C3AQ9H0P0 336 aa9□□□□□ -0.97
HPS4-201ENST00000336873 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9□□□□□ -0.97
HPS4-201ENST00000336873 KIF1AQ12756 1690 aa9□□□□□ -0.97
HPS4-201ENST00000336873 MRC1P22897 1456 aa9□□□□□ -0.97
HPS4-201ENST00000336873 TMEM150BA6NC51 233 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 FLOT1O75955 427 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 H2AFZP0C0S5 128 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 TCP1P17987 556 aaKnown RBP8.99□□□□□ -0.97
HPS4-201ENST00000336873 SEC24CP53992 1094 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 USP14P54578 494 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 MAP2K1Q02750 393 aaPredicted RBP8.99□□□□□ -0.97
HPS4-201ENST00000336873 IFT88Q13099 833 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 PPP1R7Q15435 360 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 NPY5RQ15761 445 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 WDR59Q6PJI9 974 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 BARGINQ6ZT62 677 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 H2AFVQ71UI9 128 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 ANKRD42Q8N9B4 389 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 MTMR8Q96EF0 704 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 TBK1Q9UHD2 729 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 ANAPC4Q9UJX5 808 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 FZD1Q9UP38 647 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 ATP6V0A2Q9Y487 856 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 MYO5AQ9Y4I1 1855 aaKnown RBP8.99□□□□□ -0.97
HPS4-201ENST00000336873 RGPD5Q99666 1765 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 ATMINO43313 823 aaPredicted RBP8.99□□□□□ -0.97
HPS4-201ENST00000336873 ASPRV1Q53RT3 343 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 CDC42EP5Q6NZY7 148 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 GSTA5Q7RTV2 222 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 CCSER1Q9C0I3 900 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 ZMYND12Q9H0C1 365 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 CAPN7Q9Y6W3 813 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 PALM3A6NDB9 673 aaPredicted RBP8.99□□□□□ -0.97
HPS4-201ENST00000336873 DDTLA6NHG4 134 aaPredicted RBP8.99□□□□□ -0.97
HPS4-201ENST00000336873 BMP3P12645 472 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 ARHGAP25P42331 645 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 DLGAP5Q15398 846 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 TTC31Q49AM3 519 aaPredicted RBP8.99□□□□□ -0.97
HPS4-201ENST00000336873 ZNF394Q53GI3 561 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.99□□□□□ -0.97
HPS4-201ENST00000336873 FAM186BQ8IYM0 893 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 FAM71BQ8TC56 605 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 DYDC2Q96IM9 177 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 LBHD1Q9BQE6 289 aaPredicted RBP8.99□□□□□ -0.97
HPS4-201ENST00000336873 ACP6Q9NPH0 428 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 L1RE1Q9UN81 338 aa8.99□□□□□ -0.97
HPS4-201ENST00000336873 REXO2Q9Y3B8 237 aaKnown RBP8.99□□□□□ -0.97
HPS4-201ENST00000336873 FGGP02679 453 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 CTNNA2P26232 953 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 ECM1Q16610 540 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 KAZNQ674X7 775 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 RTFDC1Q9BY42 306 aaPredicted RBP8.98□□□□□ -0.97
HPS4-201ENST00000336873 UBE2TQ9NPD8 197 aaPredicted RBP8.98□□□□□ -0.97
HPS4-201ENST00000336873 KBTBD4Q9NVX7 518 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 C4AP0C0L4 1744 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 C4BP0C0L5 1744 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 MED24O75448 989 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 BBOX1O75936 387 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 CCDC38Q502W7 563 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 GBP6Q6ZN66 633 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 ARL8AQ96BM9 186 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 REEP2Q9BRK0 252 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 ZNF577Q9BSK1 485 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 LRRC4BQ9NT99 713 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 STIM2Q9P246 746 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 SNX24Q9Y343 169 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 CD2APQ9Y5K6 639 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 ABCB11O95342 1321 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 SLIT3O75094 1523 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 CALUO43852 315 aaPredicted RBP8.98□□□□□ -0.97
HPS4-201ENST00000336873 IFNB1P01574 187 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 INPP5BP32019 993 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 CASP5P51878 434 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 ZNF543Q08ER8 600 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 SLC35G1Q2M3R5 365 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 XKR9Q5GH70 373 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 GPATCH4Q5T3I0 446 aaKnown RBP8.98□□□□□ -0.97
HPS4-201ENST00000336873 NT5DC1Q5TFE4 455 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 GALNT17Q6IS24 598 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 RSRC2Q7L4I2 434 aaKnown RBP8.98□□□□□ -0.97
HPS4-201ENST00000336873 PNMA8AQ86V59 439 aaPredicted RBP8.98□□□□□ -0.97
HPS4-201ENST00000336873 TICAM2Q86XR7 235 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 ACER1Q8TDN7 264 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 SAAL1Q96ER3 474 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 ASIC3Q9UHC3 531 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 NOVA2Q9UNW9 492 aaKnown RBP8.98□□□□□ -0.97
HPS4-201ENST00000336873 MYH2Q9UKX2 1941 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 SPATA31A6Q5VVP1 1343 aa8.98□□□□□ -0.97
HPS4-201ENST00000336873 EP400Q96L91 3159 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 GOLGA6L10A0A0M3HER8 536 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 CALCAP01258 141 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 TNNI1P19237 187 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 PTK2Q05397 1052 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 PAK2Q13177 524 aa8.97□□□□□ -0.97
HPS4-201ENST00000336873 COG2Q14746 738 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms