RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 MAP3K1Q13233 1512 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 ARHGEF33A8MVX0 844 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 BRCC3P46736 316 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 IRX5P78411 483 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 MECOMQ03112 1051 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 SLC22A15Q8IZD6 547 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 MDM1Q8TC05 714 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 CLP1Q92989 425 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 UPF3AQ9H1J1 476 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 AS3MTQ9HBK9 375 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 CDV3Q9UKY7 258 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 MYO7AQ13402 2215 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 VWA5AO00534 786 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 GJA1P17302 382 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 RAP1GAPP47736 663 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 CARTPTQ16568 116 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 HAUS3Q68CZ6 603 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 ARL6IP6Q8N6S5 226 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 KCTD4Q8WVF5 259 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 CDKL2Q92772 493 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 KIF1BPQ96EK5 621 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 KRT23Q9C075 422 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 STOX2Q9P2F5 926 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 PRMT3O60678 531 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 VBP1P61758 197 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 MMRN1Q13201 1228 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 CCDC84Q86UT8 332 aaPredicted RBP6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 USP26Q9BXU7 913 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 TRPV6Q9H1D0 765 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 DNAJC11Q9NVH1 559 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 RSL24D1Q9UHA3 163 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 GIT1Q9Y2X7 761 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 PRKAB1Q9Y478 270 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 BRD4O60885 1362 aaPredicted RBP6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 MYO1GB0I1T2 1018 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 H0YCG3 227 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 KPNA3O00505 521 aaPredicted RBP6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 ZBED4O75132 1171 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 PSIP1O75475 530 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 PARNO95453 639 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 NEK5Q6P3R8 708 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 BCAS4Q8TDM0 211 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 TMEM168Q9H0V1 697 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 BTBD7Q9P203 1132 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 DNAI1Q9UI46 699 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 GTF2A1LQ9UNN4 478 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 FAM95CA0A1B0GW59 222 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 PDHA2P29803 388 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 MAGEA2P43356 314 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 TRIM74Q86UV6 250 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 TRIM73Q86UV7 250 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 PI4K2BG5E9Z4 385 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 WASHC5Q12768 1159 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 BNIP1Q12981 228 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 MKRN3Q13064 507 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 WASHC4Q2M389 1173 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 JADE1Q6IE81 842 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 PI4K2BQ8TCG2 481 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 SYMPKQ92797 1274 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 OSBPL1AQ9BXW6 950 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 NAPBQ9H115 298 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 RANBP17Q9H2T7 1088 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 ANKIB1Q9P2G1 1089 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 ZBTB21Q9ULJ3 1066 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 TMCO1Q9UM00 188 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 ZBTB1Q9Y2K1 713 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 RTEL1-TNFRSF6BF6WH68 1400 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 HAT1O14929 419 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 ACADVLP49748 655 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 KLHL35Q6PF15 583 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 IL16Q14005 1332 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 CCDC189A1A4V9 331 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 CCDC154A6NI56 674 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 PMPCBO75439 489 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 WDR47O94967 919 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 BLOC1S2Q6QNY1 142 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 CATIPQ7Z7H3 387 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 ANKRD13BQ86YJ7 626 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 ARHGAP45Q92619 1136 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 BACH2Q9BYV9 841 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 SH3BGRL2Q9UJC5 107 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 TELO2Q9Y4R8 837 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 A2MP01023 1474 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 THEGLP0DJG4 465 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 RGS7P49802 495 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 PIH1D3Q9NQM4 214 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 EHD3Q9NZN3 535 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 CDC23Q9UJX2 597 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 KIF1BO60333 1816 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 KCNK1O00180 336 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 AP1G2O75843 785 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 KRT36O76013 467 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 EIF2B2P49770 351 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 PTPROQ16827 1216 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 VPS53Q5VIR6 699 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 KRT28Q7Z3Y7 464 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 NSMCE1Q8WV22 266 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 RMDN3Q96TC7 470 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 SLC39A3Q9BRY0 314 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 PDRG1Q9NUG6 133 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms