RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 BORCS6Q96GS4 357 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 NOX5Q96PH1 765 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 TSGA10Q9BZW7 698 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 EBF2Q9HAK2 575 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 RMND1Q9NWS8 449 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 RTCBQ9Y3I0 505 aaKnown RBP12.14□□□□□ -0.47
CCDC87-201ENST00000333861 SPDYE5A6NIY4 337 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 UBOX5O94941 541 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 SNUPNO95149 360 aaKnown RBP12.14□□□□□ -0.47
CCDC87-201ENST00000333861 CHN1P15882 459 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 EEF1GP26641 437 aaKnown RBP12.14□□□□□ -0.47
CCDC87-201ENST00000333861 SLC8A3P57103 927 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 USP4Q13107 963 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 TNIP1Q15025 636 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 RCSD1Q6JBY9 416 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 SEPT14Q6ZU15 432 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 FAM47EQ6ZV65 393 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 KRT27Q7Z3Y8 459 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 CLEC10AQ8IUN9 316 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 TRIM9Q9C026 710 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 CCDC87Q9NVE4 849 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 PNMA3Q9UL41 463 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 MYMKA6NI61 221 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 RAD21O60216 631 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 SLC5A1P13866 664 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 CCNE1P24864 410 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 INTS5Q6P9B9 1019 aaKnown RBP12.14□□□□□ -0.47
CCDC87-201ENST00000333861 GLG1Q92896 1179 aa12.14□□□□□ -0.47
CCDC87-201ENST00000333861 PRMT1Q99873 361 aaKnown RBP12.14□□□□□ -0.47
CCDC87-201ENST00000333861 MAP3K15Q6ZN16 1313 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 IGF2BP3O00425 579 aaKnown RBP eCLIP12.13□□□□□ -0.47
CCDC87-201ENST00000333861 TRAF5O00463 557 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 CREB1P16220 341 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 CHMP6Q96FZ7 201 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 GPR101Q96P66 508 aaPredicted RBP12.13□□□□□ -0.47
CCDC87-201ENST00000333861 THAP9Q9H5L6 903 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 PCDHA6Q9UN73 950 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 PLAGL2Q9UPG8 496 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 SIK3Q9Y2K2 1263 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 PCDHA8Q9Y5H6 950 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 UBR2Q8IWV8 1755 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 GRID2IPA4D2P6 1211 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 DNAJC8O75937 253 aaPredicted RBP12.13□□□□□ -0.47
CCDC87-201ENST00000333861 MMEP08473 750 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 KRT16P08779 473 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 GNAT1P11488 350 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 ARID4AP29374 1257 aaPredicted RBP12.13□□□□□ -0.47
CCDC87-201ENST00000333861 HSPA9P38646 679 aaKnown RBP12.13□□□□□ -0.47
CCDC87-201ENST00000333861 NBPF20Q3BBV1 942 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 SUSD4Q5VX71 490 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 C3orf67Q6ZVT6 689 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 CD302Q8IX05 232 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 RETREG2Q8NC44 543 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 LINC00116Q8NCU8 138 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 BAP1Q92560 729 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 XPO6Q96QU8 1125 aaKnown RBP12.13□□□□□ -0.47
CCDC87-201ENST00000333861 MXD3Q9BW11 206 aa12.13□□□□□ -0.47
CCDC87-201ENST00000333861 CCNL1Q9UK58 526 aaPredicted RBP12.13□□□□□ -0.47
CCDC87-201ENST00000333861 ZMYND8Q9ULU4 1186 aaPredicted RBP12.13□□□□□ -0.47
CCDC87-201ENST00000333861 DPPA5A6NC42 116 aa12.12□□□□□ -0.47
CCDC87-201ENST00000333861 CYTH3O43739 400 aa12.12□□□□□ -0.47
CCDC87-201ENST00000333861 ORC4O43929 436 aa12.12□□□□□ -0.47
CCDC87-201ENST00000333861 ONECUT3O60422 494 aaPredicted RBP12.12□□□□□ -0.47
CCDC87-201ENST00000333861 ABCB4P21439 1286 aa12.12□□□□□ -0.47
CCDC87-201ENST00000333861 RAB27AP51159 221 aa12.12□□□□□ -0.47
CCDC87-201ENST00000333861 TFAP4Q01664 338 aa12.12□□□□□ -0.47
CCDC87-201ENST00000333861 RBBP5Q15291 538 aaKnown RBP12.12□□□□□ -0.47
CCDC87-201ENST00000333861 HGSNATQ68CP4 663 aa12.12□□□□□ -0.47
CCDC87-201ENST00000333861 WHAMMQ8TF30 809 aa12.12□□□□□ -0.47
CCDC87-201ENST00000333861 ELMO3Q96BJ8 720 aa12.12□□□□□ -0.47
CCDC87-201ENST00000333861 L3MBTL3Q96JM7 780 aaPredicted RBP12.12□□□□□ -0.47
CCDC87-201ENST00000333861 OSBPL1AQ9BXW6 950 aa12.12□□□□□ -0.47
CCDC87-201ENST00000333861 PLCB1Q9NQ66 1216 aa12.12□□□□□ -0.47
CCDC87-201ENST00000333861 RBM28Q9NW13 759 aaKnown RBP12.12□□□□□ -0.47
CCDC87-201ENST00000333861 DBR1Q9UK59 544 aaKnown RBP12.12□□□□□ -0.47
CCDC87-201ENST00000333861 SMIM24O75264 130 aa12.12□□□□□ -0.47
CCDC87-201ENST00000333861 PRDX5P30044 214 aa12.12□□□□□ -0.47
CCDC87-201ENST00000333861 CTCFP49711 727 aaPredicted RBP12.12□□□□□ -0.47
CCDC87-201ENST00000333861 LACTB2Q53H82 288 aaPredicted RBP12.12□□□□□ -0.47
CCDC87-201ENST00000333861 FAM182AQ5T1J6 154 aa12.12□□□□□ -0.47
CCDC87-201ENST00000333861 ZNF772Q68DY9 489 aaPredicted RBP12.12□□□□□ -0.47
CCDC87-201ENST00000333861 ZNF572Q7Z3I7 529 aaPredicted RBP12.12□□□□□ -0.47
CCDC87-201ENST00000333861 MAGEC3Q8TD91 643 aa12.12□□□□□ -0.47
CCDC87-201ENST00000333861 KCNQ5Q9NR82 932 aa12.12□□□□□ -0.47
CCDC87-201ENST00000333861 SLC5A4Q9NY91 659 aa12.12□□□□□ -0.47
CCDC87-201ENST00000333861 NOP53Q9NZM5 478 aaKnown RBP12.12□□□□□ -0.47
CCDC87-201ENST00000333861 LAMB4A4D0S4 1761 aa12.11□□□□□ -0.47
CCDC87-201ENST00000333861 TMEM110-MUSTN1A8MSY1 372 aa12.11□□□□□ -0.47
CCDC87-201ENST00000333861 PECAM1P16284 738 aaPredicted RBP12.11□□□□□ -0.47
CCDC87-201ENST00000333861 SLC9A1P19634 815 aa12.11□□□□□ -0.47
CCDC87-201ENST00000333861 ECM1Q16610 540 aa12.11□□□□□ -0.47
CCDC87-201ENST00000333861 ANKRD20A2Q5SQ80 823 aa12.11□□□□□ -0.47
CCDC87-201ENST00000333861 ANKRD20A1Q5TYW2 823 aa12.11□□□□□ -0.47
CCDC87-201ENST00000333861 ANKRD20A3Q5VUR7 823 aa12.11□□□□□ -0.47
CCDC87-201ENST00000333861 USP17L2Q6R6M4 530 aa12.11□□□□□ -0.47
CCDC87-201ENST00000333861 CCDC25Q86WR0 208 aa12.11□□□□□ -0.47
CCDC87-201ENST00000333861 CCDC47Q96A33 483 aaKnown RBP12.11□□□□□ -0.47
CCDC87-201ENST00000333861 KDM4CQ9H3R0 1056 aa12.11□□□□□ -0.47
CCDC87-201ENST00000333861 PAPPAQ13219 1627 aa12.11□□□□□ -0.47
CCDC87-201ENST00000333861 SART1O43290 800 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms