RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 LARP6Q9BRS8 491 aaKnown RBP13.92□□□□□ -0.18
CMTM1-203ENST00000333001 TTYH1Q9H313 450 aaPredicted RBP13.92□□□□□ -0.18
CMTM1-203ENST00000333001 SLC28A3Q9HAS3 691 aa13.92□□□□□ -0.18
CMTM1-203ENST00000333001 STK36Q9NRP7 1315 aa13.91□□□□□ -0.18
CMTM1-203ENST00000333001 IGLV3-22A0A075B6J6 115 aa13.91□□□□□ -0.18
CMTM1-203ENST00000333001 GRXCR1A8MXD5 290 aa13.91□□□□□ -0.18
CMTM1-203ENST00000333001 SCRN1Q12765 414 aa13.91□□□□□ -0.18
CMTM1-203ENST00000333001 HIC1Q14526 733 aa13.91□□□□□ -0.18
CMTM1-203ENST00000333001 MIS18BP1Q6P0N0 1132 aa13.91□□□□□ -0.18
CMTM1-203ENST00000333001 DAGLBQ8NCG7 672 aa13.91□□□□□ -0.18
CMTM1-203ENST00000333001 LMBR1Q8WVP7 490 aa13.91□□□□□ -0.18
CMTM1-203ENST00000333001 ZNF577Q9BSK1 485 aa13.91□□□□□ -0.18
CMTM1-203ENST00000333001 TPCN1Q9ULQ1 816 aa13.91□□□□□ -0.18
CMTM1-203ENST00000333001 TELO2Q9Y4R8 837 aa13.91□□□□□ -0.18
CMTM1-203ENST00000333001 NBNO60934 754 aa13.9□□□□□ -0.18
CMTM1-203ENST00000333001 PPFIA3O75145 1194 aa13.9□□□□□ -0.18
CMTM1-203ENST00000333001 MARK3P27448 753 aa13.9□□□□□ -0.18
CMTM1-203ENST00000333001 NEK4P51957 841 aa13.9□□□□□ -0.18
CMTM1-203ENST00000333001 AK2P54819 239 aa13.9□□□□□ -0.18
CMTM1-203ENST00000333001 KRT76Q01546 638 aa13.9□□□□□ -0.18
CMTM1-203ENST00000333001 ITGB3BPQ13352 177 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-203ENST00000333001 GPNMBQ14956 572 aa13.9□□□□□ -0.18
CMTM1-203ENST00000333001 GRIK4Q16099 956 aa13.9□□□□□ -0.18
CMTM1-203ENST00000333001 PRR16Q569H4 304 aa13.9□□□□□ -0.18
CMTM1-203ENST00000333001 ZNF746Q6NUN9 644 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-203ENST00000333001 TRAF7Q6Q0C0 670 aa13.9□□□□□ -0.18
CMTM1-203ENST00000333001 SMAP1Q8IYB5 467 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-203ENST00000333001 BLIDQ8IZY5 108 aa13.9□□□□□ -0.18
CMTM1-203ENST00000333001 TUBE1Q9UJT0 475 aa13.9□□□□□ -0.18
CMTM1-203ENST00000333001 MUC3AQ02505 3323 aa13.9□□□□□ -0.18
CMTM1-203ENST00000333001 IGKV6D-21A0A0A0MT36 114 aa13.89□□□□□ -0.19
CMTM1-203ENST00000333001 POTEB3A0JP26 581 aa13.89□□□□□ -0.19
CMTM1-203ENST00000333001 MBLAC1A4D2B0 266 aaPredicted RBP13.89□□□□□ -0.19
CMTM1-203ENST00000333001 BACH1O14867 736 aa13.89□□□□□ -0.19
CMTM1-203ENST00000333001 DHX15O43143 795 aaKnown RBP13.89□□□□□ -0.19
CMTM1-203ENST00000333001 PBX2P40425 430 aa13.89□□□□□ -0.19
CMTM1-203ENST00000333001 FAM26DQ5JW98 314 aa13.89□□□□□ -0.19
CMTM1-203ENST00000333001 POTEBQ6S5H4 581 aa13.89□□□□□ -0.19
CMTM1-203ENST00000333001 ABHD15Q6UXT9 468 aa13.89□□□□□ -0.19
CMTM1-203ENST00000333001 FAM43BQ6ZT52 329 aaPredicted RBP13.89□□□□□ -0.19
CMTM1-203ENST00000333001 RASGRP4Q8TDF6 673 aa13.89□□□□□ -0.19
CMTM1-203ENST00000333001 SEPT8Q92599 483 aa13.89□□□□□ -0.19
CMTM1-203ENST00000333001 APBB2Q92870 758 aa13.89□□□□□ -0.19
CMTM1-203ENST00000333001 WNT8BQ93098 351 aa13.89□□□□□ -0.19
CMTM1-203ENST00000333001 PCYT2Q99447 389 aa13.89□□□□□ -0.19
CMTM1-203ENST00000333001 RIT2Q99578 217 aa13.89□□□□□ -0.19
CMTM1-203ENST00000333001 TRPC6Q9Y210 931 aa13.89□□□□□ -0.19
CMTM1-203ENST00000333001 MYH9P35579 1960 aaKnown RBP13.89□□□□□ -0.19
CMTM1-203ENST00000333001 HBP1O60381 514 aa13.88□□□□□ -0.19
CMTM1-203ENST00000333001 PSAPP07602 524 aa13.88□□□□□ -0.19
CMTM1-203ENST00000333001 INSRRP14616 1297 aa13.88□□□□□ -0.19
CMTM1-203ENST00000333001 GRIN2CQ14957 1233 aa13.88□□□□□ -0.19
CMTM1-203ENST00000333001 PLCB4Q15147 1175 aa13.88□□□□□ -0.19
CMTM1-203ENST00000333001 NONOQ15233 471 aaKnown RBP eCLIP13.88□□□□□ -0.19
CMTM1-203ENST00000333001 PLEKHG4Q58EX7 1191 aa13.88□□□□□ -0.19
CMTM1-203ENST00000333001 MOXD1Q6UVY6 613 aa13.88□□□□□ -0.19
CMTM1-203ENST00000333001 KRT25Q7Z3Z0 450 aa13.88□□□□□ -0.19
CMTM1-203ENST00000333001 HERC6Q8IVU3 1022 aa13.88□□□□□ -0.19
CMTM1-203ENST00000333001 TBCKQ8TEA7 893 aa13.88□□□□□ -0.19
CMTM1-203ENST00000333001 GAS2L1Q99501 681 aaPredicted RBP13.88□□□□□ -0.19
CMTM1-203ENST00000333001 ZBED2Q9BTP6 218 aa13.88□□□□□ -0.19
CMTM1-203ENST00000333001 NKX2-4Q9H2Z4 354 aa13.88□□□□□ -0.19
CMTM1-203ENST00000333001 PRDM6Q9NQX0 595 aa13.88□□□□□ -0.19
CMTM1-203ENST00000333001 ZNF302Q9NR11 478 aa13.88□□□□□ -0.19
CMTM1-203ENST00000333001 PCDHA10Q9Y5I2 948 aa13.88□□□□□ -0.19
CMTM1-203ENST00000333001 CYP3A7-CYP3A51PA0A087WV96 503 aa13.87□□□□□ -0.19
CMTM1-203ENST00000333001 M0QZ92 97 aa13.87□□□□□ -0.19
CMTM1-203ENST00000333001 M0R2N6 131 aa13.87□□□□□ -0.19
CMTM1-203ENST00000333001 DDX39AO00148 427 aaKnown RBP13.87□□□□□ -0.19
CMTM1-203ENST00000333001 ADAMTS3O15072 1205 aa13.87□□□□□ -0.19
CMTM1-203ENST00000333001 CCNE2O96020 404 aa13.87□□□□□ -0.19
CMTM1-203ENST00000333001 CYP3A7P24462 503 aa13.87□□□□□ -0.19
CMTM1-203ENST00000333001 RABGGTBP53611 331 aa13.87□□□□□ -0.19
CMTM1-203ENST00000333001 WDR5P61964 334 aaKnown RBP13.87□□□□□ -0.19
CMTM1-203ENST00000333001 MBTPS1Q14703 1052 aa13.87□□□□□ -0.19
CMTM1-203ENST00000333001 Q4G0T1 1027 aa13.87□□□□□ -0.19
CMTM1-203ENST00000333001 IER5Q5VY09 327 aa13.87□□□□□ -0.19
CMTM1-203ENST00000333001 PPP2R2DQ66LE6 453 aa13.87□□□□□ -0.19
CMTM1-203ENST00000333001 SWSAP1Q6NVH7 229 aa13.87□□□□□ -0.19
CMTM1-203ENST00000333001 PDXDC2PQ6P474 469 aa13.87□□□□□ -0.19
CMTM1-203ENST00000333001 NME8Q8N427 588 aa13.87□□□□□ -0.19
CMTM1-203ENST00000333001 IL27Q8NEV9 243 aa13.87□□□□□ -0.19
CMTM1-203ENST00000333001 ATP8B4Q8TF62 1192 aa13.87□□□□□ -0.19
CMTM1-203ENST00000333001 NAP1L4Q99733 375 aaKnown RBP13.87□□□□□ -0.19
CMTM1-203ENST00000333001 PHF20Q9BVI0 1012 aa13.87□□□□□ -0.19
CMTM1-203ENST00000333001 BRMS1Q9HCU9 246 aa13.87□□□□□ -0.19
CMTM1-203ENST00000333001 ORC3Q9UBD5 711 aaPredicted RBP13.87□□□□□ -0.19
CMTM1-203ENST00000333001 YBX2Q9Y2T7 364 aaKnown RBP13.87□□□□□ -0.19
CMTM1-203ENST00000333001 PCDHA2Q9Y5H9 948 aa13.87□□□□□ -0.19
CMTM1-203ENST00000333001 GBF1Q92538 1859 aa13.87□□□□□ -0.19
CMTM1-203ENST00000333001 COL1A2P08123 1366 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 CCDC194A0A1B0GVG4 234 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 WDR64B1ANS9 1081 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 TLL1O43897 1013 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 GAS7O60861 476 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 SEC24BO95487 1268 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 AMHP03971 560 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 CTSHP09668 335 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 SFNP31947 248 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 IGBP1P78318 339 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms