RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 TXNP10599 105 aaKnown RBP13.5□□□□□ -0.25
TRIM49B-201ENST00000332682 TTLL4Q14679 1199 aa13.5□□□□□ -0.25
TRIM49B-201ENST00000332682 GSE1Q14687 1217 aa13.5□□□□□ -0.25
TRIM49B-201ENST00000332682 CCL14Q16627 93 aa13.5□□□□□ -0.25
TRIM49B-201ENST00000332682 UGCGQ16739 394 aa13.5□□□□□ -0.25
TRIM49B-201ENST00000332682 CELF3Q5SZQ8 465 aaKnown RBP13.5□□□□□ -0.25
TRIM49B-201ENST00000332682 TMEM63BQ5T3F8 832 aa13.5□□□□□ -0.25
TRIM49B-201ENST00000332682 SV2BQ7L1I2 683 aa13.5□□□□□ -0.25
TRIM49B-201ENST00000332682 SMARCE1Q969G3 411 aa13.5□□□□□ -0.25
TRIM49B-201ENST00000332682 TRIM9Q9C026 710 aa13.5□□□□□ -0.25
TRIM49B-201ENST00000332682 ABHD16BQ9H3Z7 469 aa13.5□□□□□ -0.25
TRIM49B-201ENST00000332682 TSPY26PQ9H489 355 aa13.5□□□□□ -0.25
TRIM49B-201ENST00000332682 DNM3Q9UQ16 869 aa13.5□□□□□ -0.25
TRIM49B-201ENST00000332682 PCNTO95613 3336 aa13.5□□□□□ -0.25
TRIM49B-201ENST00000332682 MYMKA6NI61 221 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 ATG7O95352 703 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 LYPLA2O95372 231 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 EYA4O95677 639 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 PSAPP07602 524 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 SUPT20HL2P0C7V6 817 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 XRCC5P13010 732 aaKnown RBP13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 HSPA6P17066 643 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 QARSP47897 775 aaKnown RBP13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 SLC12A3P55017 1021 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 PSMC5P62195 406 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 IRF5Q13568 498 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 ACVR2BQ13705 512 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 DHX8Q14562 1220 aaKnown RBP13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 STX1AQ16623 288 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 ABHD15Q6UXT9 468 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 COPS5Q92905 334 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 GSDMAQ96QA5 445 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 C7orf25Q9BPX7 421 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 ZSWIM4Q9H7M6 989 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 SAGE1Q9NXZ1 904 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 MAN1B1Q9UKM7 699 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 ZHX1Q9UKY1 873 aaPredicted RBP13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 GABRQQ9UN88 632 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 IGSF9BQ9UPX0 1349 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 MYH9P35579 1960 aaKnown RBP13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 GPR25O00155 361 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 SSBP05455 408 aaKnown RBP eCLIP13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 PTGS1P23219 599 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 ADCYAP1R1P41586 468 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 AMPD3Q01432 767 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 PRKCZQ05513 592 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 KIF22Q14807 665 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 DPCR1Q3MIW9 517 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 MIS18BP1Q6P0N0 1132 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 CNNM4Q6P4Q7 775 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 CCDC60Q8IWA6 550 aaPredicted RBP13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 C4orf19Q8IY42 314 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 SYT2Q8N9I0 419 aaPredicted RBP13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 PIGOQ8TEQ8 1089 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 NACC1Q96RE7 527 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 BHMT2Q9H2M3 363 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 MLXIPQ9HAP2 919 aa13.49□□□□□ -0.25
TRIM49B-201ENST00000332682 IGKV6D-21A0A0A0MT36 114 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 GSTTP1A0A1W2PQM5 241 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 FSD2A1L4K1 749 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 ZBTB39O15060 712 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 KLRC4O43908 158 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 RPN1P04843 607 aaKnown RBP13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 CYP11B2P19099 503 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 BMP6P22004 513 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 CYP2C19P33261 490 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 FLT3LGP49771 235 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 NLRP12P59046 1061 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 ASIC1P78348 528 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 ARHGAP1Q07960 439 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 MORC3Q14149 939 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 HSDL1Q3SXM5 330 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 ANO6Q4KMQ2 910 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 GJC2Q5T442 439 aaPredicted RBP13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 SWSAP1Q6NVH7 229 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 DHX37Q8IY37 1157 aaKnown RBP13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 TRIML1Q8N9V2 468 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 CD99L2Q8TCZ2 262 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 DDX12PQ92771 950 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 ATP6V0A1Q93050 837 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 GPR20Q99678 358 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 LRRC27Q9C0I9 530 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 ANO10Q9NW15 660 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 GABBR1Q9UBS5 961 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 ARID2Q68CP9 1835 aa13.48□□□□□ -0.25
TRIM49B-201ENST00000332682 ADCY6O43306 1168 aa13.47□□□□□ -0.25
TRIM49B-201ENST00000332682 ZNF862O60290 1169 aa13.47□□□□□ -0.25
TRIM49B-201ENST00000332682 ZNF865P0CJ78 1059 aaPredicted RBP13.47□□□□□ -0.25
TRIM49B-201ENST00000332682 SMPD1P17405 629 aa13.47□□□□□ -0.25
TRIM49B-201ENST00000332682 C1QTNF8P60827 252 aa13.47□□□□□ -0.25
TRIM49B-201ENST00000332682 CCDC144BQ3MJ40 725 aa13.47□□□□□ -0.25
TRIM49B-201ENST00000332682 DUSP28Q4G0W2 176 aa13.47□□□□□ -0.25
TRIM49B-201ENST00000332682 ARSHQ5FYA8 562 aa13.47□□□□□ -0.25
TRIM49B-201ENST00000332682 ISM2Q6H9L7 571 aa13.47□□□□□ -0.25
TRIM49B-201ENST00000332682 C11orf57Q6ZUT1 292 aaPredicted RBP13.47□□□□□ -0.25
TRIM49B-201ENST00000332682 GPBP1Q86WP2 473 aa13.47□□□□□ -0.25
TRIM49B-201ENST00000332682 SEPT1Q8WYJ6 367 aa13.47□□□□□ -0.25
TRIM49B-201ENST00000332682 TRIB2Q92519 343 aa13.47□□□□□ -0.25
TRIM49B-201ENST00000332682 DNAJC19Q96DA6 116 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms