RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 RNF216Q9NWF9 866 aaPredicted RBP16.39■□□□□ 0.21
CLCNKA-201ENST00000331433 CEP72Q9P209 647 aa16.39■□□□□ 0.21
CLCNKA-201ENST00000331433 RAB21Q9UL25 225 aa16.39■□□□□ 0.21
CLCNKA-201ENST00000331433 SFI1A8K8P3 1242 aa16.39■□□□□ 0.21
CLCNKA-201ENST00000331433 ZBTB39O15060 712 aa16.39■□□□□ 0.21
CLCNKA-201ENST00000331433 ZNF185O15231 689 aa16.39■□□□□ 0.21
CLCNKA-201ENST00000331433 TLR2O60603 784 aa16.39■□□□□ 0.21
CLCNKA-201ENST00000331433 POLD1P28340 1107 aa16.39■□□□□ 0.21
CLCNKA-201ENST00000331433 VSNL1P62760 191 aa16.39■□□□□ 0.21
CLCNKA-201ENST00000331433 KNOP1Q1ED39 458 aaKnown RBP16.39■□□□□ 0.21
CLCNKA-201ENST00000331433 TDRD12Q587J7 1177 aaKnown RBP16.39■□□□□ 0.21
CLCNKA-201ENST00000331433 PPP4R3CPQ6ZMV5 832 aa16.39■□□□□ 0.21
CLCNKA-201ENST00000331433 OTOP1Q7RTM1 612 aa16.39■□□□□ 0.21
CLCNKA-201ENST00000331433 DRC1Q96MC2 740 aa16.39■□□□□ 0.21
CLCNKA-201ENST00000331433 SH2D4AQ9H788 454 aa16.39■□□□□ 0.21
CLCNKA-201ENST00000331433 POTEB2H3BUK9 544 aa16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 ATP8B1O43520 1251 aa16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 USO1O60763 962 aaKnown RBP16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 MOCS3O95396 460 aa16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 LCA5LO95447 670 aa16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 KCNA3P22001 575 aa16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 LRCH2Q5VUJ6 765 aa16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 EPM2AIP1Q7L775 607 aaPredicted RBP16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 TPH2Q8IWU9 490 aa16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 ANKRD13CQ8N6S4 541 aa16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 CHURC1Q8WUH1 139 aa16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 EDEM3Q9BZQ6 932 aa16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 JADE2Q9NQC1 790 aa16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 EYA4O95677 639 aa16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 EPS15P42566 896 aa16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 KCNA1Q09470 495 aa16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 KCNH2Q12809 1159 aa16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 ASTE1Q2TB18 679 aaPredicted RBP16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 DYDC2Q96IM9 177 aa16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 HSD17B14Q9BPX1 270 aa16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 TRAF3IP3Q9Y228 551 aa16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 STK24Q9Y6E0 443 aa16.38■□□□□ 0.21
CLCNKA-201ENST00000331433 TBCAO75347 108 aaKnown RBP16.37■□□□□ 0.21
CLCNKA-201ENST00000331433 PSMD10O75832 226 aa16.37■□□□□ 0.21
CLCNKA-201ENST00000331433 SLITRK3O94933 977 aa16.37■□□□□ 0.21
CLCNKA-201ENST00000331433 CAP2P40123 477 aa16.37■□□□□ 0.21
CLCNKA-201ENST00000331433 MAGEA1P43355 309 aa16.37■□□□□ 0.21
CLCNKA-201ENST00000331433 TUBB4BP68371 445 aa16.37■□□□□ 0.21
CLCNKA-201ENST00000331433 TERF2Q15554 542 aa16.37■□□□□ 0.21
CLCNKA-201ENST00000331433 BEND6Q5SZJ8 279 aaPredicted RBP16.37■□□□□ 0.21
CLCNKA-201ENST00000331433 SFMBT2Q5VUG0 894 aa16.37■□□□□ 0.21
CLCNKA-201ENST00000331433 RINT1Q6NUQ1 792 aa16.37■□□□□ 0.21
CLCNKA-201ENST00000331433 SUGCTQ9HAC7 445 aa16.37■□□□□ 0.21
CLCNKA-201ENST00000331433 SALL4Q9UJQ4 1053 aa16.37■□□□□ 0.21
CLCNKA-201ENST00000331433 FAM184BQ9ULE4 1060 aa16.37■□□□□ 0.21
CLCNKA-201ENST00000331433 ANO9A1A5B4 782 aa16.37■□□□□ 0.21
CLCNKA-201ENST00000331433 GCNT3O95395 438 aa16.37■□□□□ 0.21
CLCNKA-201ENST00000331433 ARID5AQ03989 594 aa16.37■□□□□ 0.21
CLCNKA-201ENST00000331433 NBPF9Q3BBW0 867 aa16.37■□□□□ 0.21
CLCNKA-201ENST00000331433 ABCB6Q9NP58 842 aa16.37■□□□□ 0.21
CLCNKA-201ENST00000331433 SHTN1A0MZ66 631 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 PDE2AO00408 941 aaPredicted RBP16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 RASSF7Q02833 373 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 TRAF1Q13077 416 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 RAPGEF1Q13905 1077 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 ENOX2Q16206 610 aaKnown RBP16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 CEP55Q53EZ4 464 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 UTP14CQ5TAP6 766 aaKnown RBP16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 LDHDQ86WU2 507 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 TRIM58Q8NG06 486 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 ZBTB9Q96C00 473 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 IKZF4Q9H2S9 585 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 MRPL11Q9Y3B7 192 aaKnown RBP16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 ASTN1O14525 1302 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 SSU72P8A0A1W2PR75 194 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 GAS7O60861 476 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 TACC1O75410 805 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 AKAP3O75969 853 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 ARP10275 920 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 ACTN1P12814 892 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 MAPK8IP2Q13387 824 aaPredicted RBP16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 SLC9C1Q4G0N8 1177 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 GRIPAP1Q4V328 841 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 NIM1KQ8IY84 436 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 CAGE1Q8TC20 777 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 HNRNPLLQ8WVV9 542 aaKnown RBP16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 SLC5A5Q92911 643 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 ARMCX3Q9UH62 379 aaPredicted RBP16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 ZNRF3Q9ULT6 936 aa16.36■□□□□ 0.21
CLCNKA-201ENST00000331433 CLIC2O15247 247 aa16.35■□□□□ 0.21
CLCNKA-201ENST00000331433 TBC1D12O60347 775 aa16.35■□□□□ 0.21
CLCNKA-201ENST00000331433 CASP4P49662 377 aa16.35■□□□□ 0.21
CLCNKA-201ENST00000331433 PPP2R5CQ13362 524 aa16.35■□□□□ 0.21
CLCNKA-201ENST00000331433 AGBL1Q96MI9 1066 aa16.35■□□□□ 0.21
CLCNKA-201ENST00000331433 WRAP73Q9P2S5 460 aaPredicted RBP16.35■□□□□ 0.21
CLCNKA-201ENST00000331433 KIF13BQ9NQT8 1826 aa16.35■□□□□ 0.21
CLCNKA-201ENST00000331433 WNT10BO00744 389 aa16.35■□□□□ 0.21
CLCNKA-201ENST00000331433 PDXKO00764 312 aa16.35■□□□□ 0.21
CLCNKA-201ENST00000331433 POLR3GO15318 223 aaPredicted RBP16.35■□□□□ 0.21
CLCNKA-201ENST00000331433 CALUO43852 315 aaPredicted RBP16.35■□□□□ 0.21
CLCNKA-201ENST00000331433 NR3C1P04150 777 aa16.35■□□□□ 0.21
CLCNKA-201ENST00000331433 SERPING1P05155 500 aa16.35■□□□□ 0.21
CLCNKA-201ENST00000331433 DCAF17Q5H9S7 520 aaPredicted RBP16.35■□□□□ 0.21
CLCNKA-201ENST00000331433 FKBP1CQ5VVH2 108 aa16.35■□□□□ 0.21
CLCNKA-201ENST00000331433 FAM133AQ8N9E0 248 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms