RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 RBAK-RBAKDNI3L0D1 243 aa16.05■□□□□ 0.16
TPM3-206ENST00000330188 PDE2AO00408 941 aaPredicted RBP16.05■□□□□ 0.16
TPM3-206ENST00000330188 EYA4O95677 639 aa16.05■□□□□ 0.16
TPM3-206ENST00000330188 RSPH10BP0C881 870 aa16.05■□□□□ 0.16
TPM3-206ENST00000330188 MYBP10242 640 aa16.05■□□□□ 0.16
TPM3-206ENST00000330188 APBA1Q02410 837 aa16.05■□□□□ 0.16
TPM3-206ENST00000330188 KNOP1Q1ED39 458 aaKnown RBP16.05■□□□□ 0.16
TPM3-206ENST00000330188 TDRD12Q587J7 1177 aaKnown RBP16.05■□□□□ 0.16
TPM3-206ENST00000330188 HDXQ7Z353 690 aa16.05■□□□□ 0.16
TPM3-206ENST00000330188 TBC1D5Q92609 795 aa16.05■□□□□ 0.16
TPM3-206ENST00000330188 GMLQ99445 158 aa16.05■□□□□ 0.16
TPM3-206ENST00000330188 SUGCTQ9HAC7 445 aa16.05■□□□□ 0.16
TPM3-206ENST00000330188 GOPCQ9HD26 462 aa16.05■□□□□ 0.16
TPM3-206ENST00000330188 RGL1Q9NZL6 768 aa16.05■□□□□ 0.16
TPM3-206ENST00000330188 ZHX1Q9UKY1 873 aaPredicted RBP16.05■□□□□ 0.16
TPM3-206ENST00000330188 COL4A5P29400 1685 aa16.04■□□□□ 0.16
TPM3-206ENST00000330188 POLR3GO15318 223 aaPredicted RBP16.04■□□□□ 0.16
TPM3-206ENST00000330188 PRPF6O94906 941 aaKnown RBP16.04■□□□□ 0.16
TPM3-206ENST00000330188 CFBP00751 764 aa16.04■□□□□ 0.16
TPM3-206ENST00000330188 SERPING1P05155 500 aa16.04■□□□□ 0.16
TPM3-206ENST00000330188 KCNH2Q12809 1159 aa16.04■□□□□ 0.16
TPM3-206ENST00000330188 TRAF1Q13077 416 aa16.04■□□□□ 0.16
TPM3-206ENST00000330188 SLC9C1Q4G0N8 1177 aa16.04■□□□□ 0.16
TPM3-206ENST00000330188 TEX2Q8IWB9 1127 aa16.04■□□□□ 0.16
TPM3-206ENST00000330188 GANQ9H2C0 597 aa16.04■□□□□ 0.16
TPM3-206ENST00000330188 RANBP17Q9H2T7 1088 aaKnown RBP16.04■□□□□ 0.16
TPM3-206ENST00000330188 SALL4Q9UJQ4 1053 aa16.04■□□□□ 0.16
TPM3-206ENST00000330188 HDAC9Q9UKV0 1011 aa16.04■□□□□ 0.16
TPM3-206ENST00000330188 RABGAP1Q9Y3P9 1069 aa16.04■□□□□ 0.16
TPM3-206ENST00000330188 RAD17O75943 681 aa16.04■□□□□ 0.16
TPM3-206ENST00000330188 VIL1P09327 827 aaKnown RBP16.04■□□□□ 0.16
TPM3-206ENST00000330188 DLGAP5Q15398 846 aa16.04■□□□□ 0.16
TPM3-206ENST00000330188 BMT2Q1RMZ1 405 aa16.04■□□□□ 0.16
TPM3-206ENST00000330188 CCDC174Q6PII3 467 aa16.04■□□□□ 0.16
TPM3-206ENST00000330188 FRMD5Q7Z6J6 570 aa16.04■□□□□ 0.16
TPM3-206ENST00000330188 MSL3Q8N5Y2 521 aaKnown RBP16.04■□□□□ 0.16
TPM3-206ENST00000330188 CAGE1Q8TC20 777 aa16.04■□□□□ 0.16
TPM3-206ENST00000330188 BCAS3Q9H6U6 928 aa16.04■□□□□ 0.16
TPM3-206ENST00000330188 RNF216Q9NWF9 866 aaPredicted RBP16.04■□□□□ 0.16
TPM3-206ENST00000330188 H3BQF6 201 aa16.03■□□□□ 0.16
TPM3-206ENST00000330188 GCOM1H8Y6P7 765 aaPredicted RBP16.03■□□□□ 0.16
TPM3-206ENST00000330188 PDXKO00764 312 aa16.03■□□□□ 0.16
TPM3-206ENST00000330188 POLR2MP0CAP2 368 aa16.03■□□□□ 0.16
TPM3-206ENST00000330188 SPDYE2Q495Y8 402 aa16.03■□□□□ 0.16
TPM3-206ENST00000330188 SLC30A10Q6XR72 485 aa16.03■□□□□ 0.16
TPM3-206ENST00000330188 OTOP1Q7RTM1 612 aa16.03■□□□□ 0.16
TPM3-206ENST00000330188 KCTD17Q8N5Z5 321 aa16.03■□□□□ 0.16
TPM3-206ENST00000330188 ALS2CR12Q96Q35 445 aa16.03■□□□□ 0.16
TPM3-206ENST00000330188 HSD17B14Q9BPX1 270 aa16.03■□□□□ 0.16
TPM3-206ENST00000330188 ASTN1O14525 1302 aa16.03■□□□□ 0.16
TPM3-206ENST00000330188 TARSL2A2RTX5 802 aaKnown RBP16.03■□□□□ 0.16
TPM3-206ENST00000330188 CALUO43852 315 aaPredicted RBP16.03■□□□□ 0.16
TPM3-206ENST00000330188 PSMD10O75832 226 aa16.03■□□□□ 0.16
TPM3-206ENST00000330188 PRLRP16471 622 aa16.03■□□□□ 0.16
TPM3-206ENST00000330188 EPS15P42566 896 aa16.03■□□□□ 0.16
TPM3-206ENST00000330188 RASSF7Q02833 373 aa16.03■□□□□ 0.16
TPM3-206ENST00000330188 RINT1Q6NUQ1 792 aa16.03■□□□□ 0.16
TPM3-206ENST00000330188 DPY19L2P1Q6NXN4 242 aa16.03■□□□□ 0.16
TPM3-206ENST00000330188 CREG2Q8IUH2 290 aa16.03■□□□□ 0.16
TPM3-206ENST00000330188 TXLNBQ8N3L3 684 aa16.03■□□□□ 0.16
TPM3-206ENST00000330188 TUFT1Q9NNX1 390 aa16.03■□□□□ 0.16
TPM3-206ENST00000330188 ZCCHC17Q9NP64 241 aaKnown RBP16.03■□□□□ 0.16
TPM3-206ENST00000330188 TYW1Q9NV66 732 aaKnown RBP16.03■□□□□ 0.16
TPM3-206ENST00000330188 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.03■□□□□ 0.16
TPM3-206ENST00000330188 SLITRK3O94933 977 aa16.02■□□□□ 0.16
TPM3-206ENST00000330188 PPP2R5CQ13362 524 aa16.02■□□□□ 0.16
TPM3-206ENST00000330188 CTTNQ14247 550 aaKnown RBP16.02■□□□□ 0.16
TPM3-206ENST00000330188 LRCH2Q5VUJ6 765 aa16.02■□□□□ 0.16
TPM3-206ENST00000330188 CDAN1Q8IWY9 1227 aa16.02■□□□□ 0.16
TPM3-206ENST00000330188 ANKRD13CQ8N6S4 541 aa16.02■□□□□ 0.16
TPM3-206ENST00000330188 CHURC1Q8WUH1 139 aa16.02■□□□□ 0.16
TPM3-206ENST00000330188 SLC5A5Q92911 643 aa16.02■□□□□ 0.16
TPM3-206ENST00000330188 DYDC2Q96IM9 177 aa16.02■□□□□ 0.16
TPM3-206ENST00000330188 DRC1Q96MC2 740 aa16.02■□□□□ 0.16
TPM3-206ENST00000330188 VCPKMTQ9H867 229 aa16.02■□□□□ 0.16
TPM3-206ENST00000330188 POLD4Q9HCU8 107 aa16.02■□□□□ 0.16
TPM3-206ENST00000330188 AIPL1Q9NZN9 384 aa16.02■□□□□ 0.16
TPM3-206ENST00000330188 ARMCX3Q9UH62 379 aaPredicted RBP16.02■□□□□ 0.16
TPM3-206ENST00000330188 ZBTB12Q9Y330 459 aaPredicted RBP16.02■□□□□ 0.16
TPM3-206ENST00000330188 TBCAO75347 108 aaKnown RBP16.01■□□□□ 0.15
TPM3-206ENST00000330188 RAPGEF1Q13905 1077 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 CASP8Q14790 479 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 EZH2Q15910 746 aaKnown RBP16.01■□□□□ 0.15
TPM3-206ENST00000330188 GRIPAP1Q4V328 841 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 ZNF572Q7Z3I7 529 aaPredicted RBP16.01■□□□□ 0.15
TPM3-206ENST00000330188 PIGOQ8TEQ8 1089 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 COG1Q8WTW3 980 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 PDE11AQ9HCR9 933 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 PLA2G6O60733 806 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 AKAP3O75969 853 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 GCNT3O95395 438 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 AFPP02771 609 aaKnown RBP16.01■□□□□ 0.15
TPM3-206ENST00000330188 POLD1P28340 1107 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 UBXN2AP68543 259 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 C2orf54Q08AI8 447 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 ZYXQ15942 572 aaKnown RBP16.01■□□□□ 0.15
TPM3-206ENST00000330188 RTKN2Q8IZC4 609 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 LARGE2Q8N3Y3 721 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 RNF10Q8N5U6 811 aaKnown RBP16.01■□□□□ 0.15
TPM3-206ENST00000330188 TTLL6Q8N841 843 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms